Elizabethkingia sp. M8: JCR23_08145
Help
Entry
JCR23_08145 CDS
T09429
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
eliz
Elizabethkingia sp. M8
Pathway
eliz01501
beta-Lactam resistance
eliz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
eliz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JCR23_08145
01503 Cationic antimicrobial peptide (CAMP) resistance
JCR23_08145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eliz02000
]
JCR23_08145
01504 Antimicrobial resistance genes [BR:
eliz01504
]
JCR23_08145
Transporters [BR:
eliz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JCR23_08145
Antimicrobial resistance genes [BR:
eliz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JCR23_08145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
Motif
Other DBs
NCBI-ProteinID:
QQM28364
LinkDB
All DBs
Position
1778880..1782056
Genome browser
AA seq
1058 aa
AA seq
DB search
MLKKFIERPVLSTVISIILLLLGTLSLFNLPITLFPDIAPPSVQVTAFYPGANAEVVARS
VANPIEEAVNGVENMTYMTSNSSNDGTMTLNVFFKQGTDPDNASVNVQNRVSKAMSQLPQ
EVTQSGISTQKVQNSFIMFMGLYSEDPKQYDELFLQNYLKINVIPQIQRIPGVAQAQVFG
TRDYSMRIWLKPDRLAANNLSPQEVMAAIKDHNLEAAPGRLGQGSKETYEYILKYKGKLN
KNDDYENIVIKANADGSFLRLKDLARVELGSYTYTAENRVDGKPVAGFAILQTAGSNANE
ILTEIEKQVDEFSTTLPKGVKPIIMYNSKDFLDASIHQVVETLVIAFILVFIVVYIFLQD
FRSTLIPAIAVPVAIIGTFFFLQLFGFSINMLTLFALVLAIGIVVDDAIVVVEAVHSKME
QTGMPVEQATMSSMSEISGAIISITLVMSAVFVPVGFMQGPAGVFYRQFAFTLAIAIIIS
AINALTLSPALCALFLDDPQGEHGHQEKKGFGAKFFRAFNAAFNTMTRKYIYSLKFLIKN
KWVAVGGLVLITAISVFLIKKAPSGFIPTEDQGFVLYAVNTPPGSSLERTHRATEEIDKI
VKKENATNHLWVADGLNFISNANASPYSAGFIRLKDIDKRGDMKDPDQIAAALTGKVSAV
KDANAFFFNFPTVQGFGNVSGFEFMLQDRTNGSFEQLGATTQAFIGELMKRKEIAFAFTT
YAAGNPQYTIEVDSEKAKQLGVSITELMQTMQIYFGSSFVSDFNRFGKYYRVMAQADVPY
RTDINSLEGIYVKNNMGEMVPTKTLVKLKRTFGPETVTRNNLFNAVTINGTPKPGYSTGD
AIKAVEEVAKQSLPRGYGYEWTGITREEIKAGGQTAFIFLLSILFVYFLLSAQYESYILP
FAIILTIPTGIFGVYAFTGLAGIDNNIYVQVGLIMLIGLLAKNAILIVEFAVQRRKAGKS
LIESALQASRLRLRPILMTSFAFIIGMLPLVWTQGASAKGNHSIGISTVGGMLTGVLLGI
FIIPVLYVIFQYLHEKMPSKKKRRALQKELAHQHSASH
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaaaatttattgaaagaccggtactctctaccgttatctctataatactacta
ttgctggggactctttcattgtttaatcttccgattacattgtttccggatattgcacct
ccaagtgtacaggttacagctttctatccgggggccaatgcagaagttgtagcccgttcg
gtagccaatcctattgaagaagcagtgaacggggtggaaaacatgacatacatgacttcc
aattccagtaacgatggtacgatgactctaaatgtattttttaagcagggaaccgatcct
gataatgcttcagtcaacgtacaaaacagagtatccaaggcaatgagccagcttcctcag
gaagtaacccagtcgggtatttccactcagaaagtacagaacagttttattatgttcatg
ggattatacagtgaagatcctaagcaatatgatgagcttttccttcaaaactacctgaaa
attaatgttattcctcagatacaacgtattcccggagtagcacaagcacaggtgttcgga
acaagagactactctatgagaatatggctgaaaccagatcgtttggcagccaataatctt
tctcctcaggaagtaatggccgcaattaaagaccataatctggaagcagcacctggtcgt
ctgggtcagggaagtaaagaaacctatgaatatatccttaaatataaaggtaaactgaat
aaaaatgatgactacgaaaacattgttatcaaagcgaacgcagatggttctttccttaga
ttaaaagatcttgcaagggtggaattaggatcttacacttataccgcagagaatcgtgta
gacggaaaacctgttgccggatttgcaatcttacagactgcaggttccaatgccaatgag
atccttactgagatcgagaaacaggtagatgagttctccacgactcttcctaaaggtgta
aaacctattattatgtataactctaaagacttcctggatgcatcgatccatcaggttgta
gagactttggttatcgcatttattctggtatttatcgtagtctatattttccttcaggat
ttcagatctacactaattccggcgattgcagttccggttgcaattattggtacattcttc
ttccttcagctattcggtttcagtatcaacatgcttacattgtttgcattggtattagct
attggtattgttgtggatgatgccattgttgtggtagaggcagtccattccaaaatggag
caaacaggtatgccggtggaacaggcaacaatgagctctatgagtgaaatatccggagcc
attatctccattacattagttatgtctgccgtattcgtccctgtaggatttatgcagggt
cctgccggtgttttctaccgacaatttgcatttacgctggccattgcaattattatatct
gcaattaatgcacttactttaagtcctgcactttgtgcgctgtttctggatgatccacaa
ggtgaacacggacatcaggagaaaaaaggatttggcgccaaattctttagagcttttaat
gctgcgtttaatacgatgacacgtaaatatatttacagccttaaattcctgattaagaat
aaatgggtagctgtaggtggtcttgtattaattacagcaataagtgttttccttattaaa
aaagcaccatccggatttattccaacagaagaccagggatttgtattatatgctgtaaat
actcctccaggaagttcactggaaagaacacaccgtgcaacggaggagattgataaaatt
gtaaagaaagaaaatgcaacaaatcacctttgggtagcagacggactaaactttatcagt
aatgctaatgcatccccatattctgcaggtttcatcaggctgaaagatattgataagagg
ggtgatatgaaagatcctgatcagattgctgcggctttaacaggaaaagtaagtgctgta
aaagatgctaatgcattcttcttcaacttccctactgtacaaggttttggtaacgtcagt
ggtttcgaatttatgctgcaggacagaactaacggctctttcgagcaattaggagcaaca
actcaggcatttatcggtgagttgatgaaaagaaaagaaattgcatttgccttcactaca
tatgctgccggaaatccacaatacacgatagaagtagattctgaaaaagcaaaacaacta
ggtgtatccatcactgagctaatgcagactatgcagatttattttggtagtagctttgta
tccgattttaacagatttggtaaatactacagagtaatggcccaggccgatgttccgtat
cgtacagacatcaattcattggaaggtatttatgtaaaaaataatatgggtgaaatggtt
ccgactaaaacactagttaaattaaaacgaacttttggacctgaaactgtaacaagaaat
aacttattcaatgccgttaccatcaacggaacaccaaaaccgggatacagtacaggagat
gccattaaagctgtagaagaagtagctaagcaatcacttccccgtggttatggttacgaa
tggacaggtattacacgtgaagagattaaagcaggcggacagactgcatttatcttcctg
ttgagtatattatttgtttacttcctgctttctgcgcagtatgaaagttatattcttccg
tttgctattattctgacaatcccaacgggaatattcggagtatatgctttcaccggattg
gcaggaattgataacaatatttatgttcaggtggggctgattatgcttatcggattactg
gcgaaaaatgcgatcctgatcgtggagtttgctgttcagcgaagaaaagctggcaagtcg
ttgatagaatctgcacttcaggcatccagactaagacttcgccctattctgatgacatct
ttcgctttcattataggtatgcttccattggtttggacacaaggtgcatcggcaaaaggg
aatcattctatcggaatcagtactgttgggggaatgcttaccggagttttactgggaatc
tttattattcctgtattatatgtaatcttccagtacctgcatgaaaaaatgccaagcaag
aaaaaacgcagagcacttcagaaagaattagctcatcaacattctgcttcacactaa
DBGET
integrated database retrieval system
