Elizabethkingia sp. M8: JCR23_11130
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Entry
JCR23_11130 CDS
T09429
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
eliz
Elizabethkingia sp. M8
Pathway
eliz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eliz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JCR23_11130 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eliz03400
]
JCR23_11130 (nth)
Enzymes [BR:
eliz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JCR23_11130 (nth)
DNA repair and recombination proteins [BR:
eliz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JCR23_11130 (nth)
Prokaryotic type
JCR23_11130 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
DUF3349
RecR_HhH
Ogg-HhH
Motif
Other DBs
NCBI-ProteinID:
QQM25448
UniProt:
A0A7T7HA79
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All DBs
Position
complement(2396559..2397179)
Genome browser
AA seq
206 aa
AA seq
DB search
MTKKQRAETVMTELEKLYPQVPIPLDHFDPYTLLVAVALSAQTTDKKVNEVTPLLFAKAQ
TPQQMARLEEFEIKELIKEIGLSNTKAKNLKRMAELLVERHQGVVPESFEDLENLPGVGH
KTASVVMSQAFGHPAFPVDTHINRLMKQWKLSEGKNVEQVEADAKKLFPKSAWNKLHLQI
IFYGREYSPARGKGEKDFLTKMLFDK
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaaagcaaagagcggaaactgtaatgacagaactggagaaactatatccccag
gtaccaatccctttagaccacttcgatccttatacacttttagttgccgtagcgctttct
gcgcagacaacagataagaaagtaaatgaagtaactcctttactttttgcaaaggcacaa
actccacaacagatggctcgtttggaagaatttgaaattaaagagctgataaaagagatt
ggcctgtcgaatacaaaagctaaaaatctgaaaagaatggctgagcttcttgtagaaaga
catcagggagtagttccggaaagttttgaagatcttgaaaatttgccgggtgtaggtcac
aaaacagcttctgtagtaatgtcacaggcattcggacaccctgcatttcccgtagatacg
catatcaacagactaatgaagcaatggaaactttcagaaggcaaaaatgtagaacaggtg
gaagccgatgctaaaaagctatttccaaaaagcgcatggaacaaacttcatcttcagata
atattttacggaagagaatactctcccgcacggggaaagggtgaaaaagattttttaact
aaaatgctgtttgataagtaa
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