KEGG   Enhydra lutris kenyoni (northern sea otter): 111150027
Entry
111150027         CDS       T05871                                 
Name
(RefSeq) TNF receptor-associated factor 6
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
elk  Enhydra lutris kenyoni (northern sea otter)
Pathway
elk04010  MAPK signaling pathway
elk04064  NF-kappa B signaling pathway
elk04120  Ubiquitin mediated proteolysis
elk04140  Autophagy - animal
elk04144  Endocytosis
elk04380  Osteoclast differentiation
elk04620  Toll-like receptor signaling pathway
elk04621  NOD-like receptor signaling pathway
elk04622  RIG-I-like receptor signaling pathway
elk04657  IL-17 signaling pathway
elk04722  Neurotrophin signaling pathway
elk04936  Alcoholic liver disease
elk05132  Salmonella infection
elk05133  Pertussis
elk05135  Yersinia infection
elk05140  Leishmaniasis
elk05142  Chagas disease
elk05145  Toxoplasmosis
elk05152  Tuberculosis
elk05160  Hepatitis C
elk05161  Hepatitis B
elk05162  Measles
elk05168  Herpes simplex virus 1 infection
elk05169  Epstein-Barr virus infection
elk05170  Human immunodeficiency virus 1 infection
elk05171  Coronavirus disease - COVID-19
elk05200  Pathways in cancer
elk05222  Small cell lung cancer
elk05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
elk05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:elk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111150027
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    111150027
   04064 NF-kappa B signaling pathway
    111150027
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111150027
   04140 Autophagy - animal
    111150027
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    111150027
   04621 NOD-like receptor signaling pathway
    111150027
   04622 RIG-I-like receptor signaling pathway
    111150027
   04657 IL-17 signaling pathway
    111150027
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    111150027
  09158 Development and regeneration
   04380 Osteoclast differentiation
    111150027
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    111150027
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    111150027
  09162 Cancer: specific types
   05222 Small cell lung cancer
    111150027
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    111150027
   05161 Hepatitis B
    111150027
   05160 Hepatitis C
    111150027
   05171 Coronavirus disease - COVID-19
    111150027
   05162 Measles
    111150027
   05168 Herpes simplex virus 1 infection
    111150027
   05169 Epstein-Barr virus infection
    111150027
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    111150027
   05135 Yersinia infection
    111150027
   05133 Pertussis
    111150027
   05152 Tuberculosis
    111150027
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    111150027
   05140 Leishmaniasis
    111150027
   05142 Chagas disease
    111150027
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    111150027
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    111150027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:elk04131]
    111150027
   04121 Ubiquitin system [BR:elk04121]
    111150027
Enzymes [BR:elk01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111150027
Membrane trafficking [BR:elk04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    111150027
Ubiquitin system [BR:elk04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    111150027
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 SlyX TRAF3_RING RING_XB3-XBAT31 U-box PspA_IM30 Spc29 DUF4455 DUF16 zf-RING_11 HAP1_N ATG16 EzrA DUF7310 Filament Myosin_tail_1 Med21 Sina_ZnF Laminin_II AAA_13 TMF_DNA_bd CENP-F_leu_zip DUF1664 DUF7607 TACC_C
Other DBs
NCBI-GeneID: 111150027
NCBI-ProteinID: XP_022363051
UniProt: A0A2Y9JQV9
LinkDB
Position
Unknown
AA seq 541 aa
MSLLNCENSCGSSHSESDCCAAMTSSCSAAAKDDSVSGTASTGNLSSSFMEEVQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLMVKCPNEGCLQKMELRHLEDHQAHCEFTLMNCPQCQRPFQKCQLNIHILK
ECPRRQVSCMNCAMLMAFEDKEIHDQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPV
PCTFSTFGCHVKMQRNHLARHLQENTQSHMRMLAQAVQSLSLALAPVPPRDMPPYDSSSV
SRVSASCHPEVHNFQETIQQLEGRLVRQDHQIRELTAKMETQSMHVSELKRTIRTLEDKV
AEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQ
RCANYISLFVHTMQGEYDSHLPWPFQGTIRLAILDQSEAPVRQNHEEIMDAKPELLAFQR
PTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDSG
T
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgagtctgctaaactgtgaaaacagctgtggatccagccattctgaaagtgactgctgt
gctgccatgaccagctcctgtagcgctgctgcgaaagatgacagtgtgagtggaaccgcc
agcacagggaacctctccagttcttttatggaagaggtccaggggtatgatgtggagttt
gacccacccctggaaagcaagtatgagtgccccatctgcttgatggcattacgggaagca
gtgcaaacaccctgtggccacaggttctgcaaagcttgcatcatcaagtcaataagggat
gctggtcacaaatgtccagttgacaatgaaatattgctggaaaatcaactatttcctgat
aattttgcaaaacgagagattctttctctgatggtgaagtgtccaaatgaaggttgtttg
cagaagatggaactgaggcatcttgaggatcaccaagcacattgtgagtttactctcatg
aattgtccccagtgtcaacgtcccttccaaaaatgccagcttaatattcacattcttaaa
gagtgcccgaggagacaggtttcttgcatgaactgtgctatgttgatggcatttgaagat
aaagagatccatgaccagaattgtcctttggcaaatgtcatctgtgaatactgcaatacc
atgctcatcagagaacagatgcctaatcactatgatctagactgtccgacagccccagtt
ccatgcactttcagtactttcggttgtcatgtaaagatgcagaggaatcacttggctcgc
cacctgcaagagaacacgcagtcgcacatgagaatgctggctcaggctgtccagagtttg
agccttgctctagctcctgtacctccacgcgacatgccgccgtacgattcctcctccgtg
tcccgggtctctgcatcgtgccacccagaggtccataatttccaagaaaccattcagcag
ttagagggtcgcctcgtaagacaagaccatcaaatccgagagctaactgctaagatggaa
actcagagcatgcacgtaagtgagctcaaacgaacgattcgaacgcttgaagacaaagtt
gctgagatagaagcacagcagtgcaacgggatctacatctggaagatcggcaacttcggg
atgcacctgaagtctcaggaagaggagaaacccgttgtcattcacagccctggcttctac
acgggcaaacccgggtacaaactgtgcatgcgcctgcacctccagctacccactgctcag
cgctgcgctaactacatatccctcttcgtgcacacaatgcaaggggagtatgacagccat
ctcccttggcccttccagggtacaatacgccttgcgatccttgatcagtctgaagcgccg
gtaaggcaaaaccatgaagagatcatggacgccaaacccgagcttctcgccttccagaga
cccacgatcccacggaacccaaaaggctttggctacgtgacttttatgcatctggaagcc
ctaagacagagaaccttcatcaaggatgatactttattagtacgctgtgaggtctccacc
cgcttcgacatgggcagtctccggagggagggttttcagccacgaagtactgattcaggg
acgtag

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