KEGG   PATHWAY: ell03440
Entry
ell03440                    Pathway                                
Name
Homologous recombination - Escherichia coli W
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
ell03440  Homologous recombination
ell03440

Other DBs
GO: 0000724
Organism
Escherichia coli W [GN:ell]
Gene
WFL_00890  dnaE; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
WFL_01020  dnaQ; DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
WFL_02675  priC; primosomal replication protein N'' [KO:K04067]
WFL_02690  dnaX; DNA polymerase III subunits gamma and tau [KO:K02343] [EC:2.7.7.7]
WFL_02700  recR; recombination protein RecR [KO:K06187]
WFL_03450  holA; DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
WFL_05895  holB; DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
WFL_09885  holE; DNA polymerase III subunit theta [KO:K02345] [EC:2.7.7.7]
WFL_09990  ruvB; Holliday junction DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
WFL_09995  ruvA; Holliday junction DNA helicase RuvA [KO:K03550]
WFL_10005  ruvC; Holliday junction resolvase [KO:K01159] [EC:3.1.21.10]
WFL_12665  [KO:K03111]
WFL_13670  recO; DNA repair protein RecO [KO:K03584]
WFL_14140  recA; recombinase A [KO:K03553]
WFL_14950  recD; exonuclease V subunit alpha [KO:K03581] [EC:3.1.11.5]
WFL_14955  recB; exonuclease V subunit beta [KO:K03582] [EC:3.1.11.5]
WFL_14965  recC; exonuclease V subunit gamma [KO:K03583] [EC:3.1.11.5]
WFL_15360  recJ; ssDNA exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
WFL_19200  recG; ATP-dependent DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
WFL_19545  recF; recombination protein F [KO:K03629]
WFL_19550  dnaN; DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
WFL_20295  polA; DNA polymerase I [KO:K02335] [EC:2.7.7.7]
WFL_20905  priA; primosome assembly protein PriA [KO:K04066] [EC:5.6.2.4]
WFL_21515  ssb; single-stranded DNA-binding protein [KO:K03111]
WFL_22205  priB; primosomal replication protein N [KO:K02686]
WFL_22495  holC; DNA polymerase III subunit chi [KO:K02339] [EC:2.7.7.7]
WFL_23005  dnaT; primosomal protein I [KO:K02317]
WFL_23045  holD; DNA polymerase III subunit psi [KO:K02344] [EC:2.7.7.7]
WFL_23945  [KO:K03111]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   

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