Esox lucius (northern pike): 105006084
Help
Entry
105006084 CDS
T04894
Name
(RefSeq) sodium channel protein type 4 subunit alpha A
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
els04040
]
105006084
Ion channels [BR:
els04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105006084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
105006084
NCBI-ProteinID:
XP_028975437
LinkDB
All DBs
Position
LG05:29709199..29783889
Genome browser
AA seq
1865 aa
AA seq
DB search
MADLLPPTGADAFRRFTPESLAEIERLMEEKKRAMQVEGYVDPGPSEPSKDLEAGKSLPM
IFGDAPTEMLNTPLEDIDPFYKAKKTFIVITKGNTIFRFNAEPSCYILSPFNLLRRGAIK
ILIHSFIMITILSNCFFMTMSDPPSWSKTVEYVFTGIYTFEASCKVLSRGFVVGPFTFLR
DPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALVQSVKKM
GDVMILTVFALAVFALIGLQLFMGNLRNKCIRWPLLNSTVFDYNPTLFFNDTMGFSETMN
STIPFDFQEYINNEENHYFLEGSLDALLCGNSSDAGKCPEGYTCIKAGRNPNYGYTSYDS
FGWAFLSLFRLMTQDYWENLFQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAYD
EQNVATLKEAQDREEEFQRLLEQYRIQDQLAAAAAGSQATLTSRKELSLHSGSHGGSADD
EQSVGEDIIKDCNGRIVPRLAIIPVSSESEAVTEEGSKVDSMLHVEQPGLKNRSASAISV
LSAVIEEMEDAQKPCPPGWYKFADMFLKWDCCVPWVWLKKWLLFIVMDPFVDLGITICIV
LNTLFMAMEHFPMSPEFDHMLSVGNLVFTGIFTAEMVFKLCAMDPYYYFQVGWNVFDSII
VTFSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAI
IVFIFAVVGMQLFGKSYKECVCKIAIDCKLPRWHMHDFFHSFLIVFRILCGEWIETMWDC
MEVAGAGMCLVVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSSDDDGEMNNLQIAIGRIN
WGIDWVKAFIRRKVLQLLGKKSPGDEEGVEGVEGTPEKEAVALNHLDTGQDCKTLNKMSN
CVEGLQADGDVSLTVPIAQVESDFENDDDDSGSLRTEEEKEQAEHINVPINGKIKKVKLL
CLNYDSSVCSTVDYVPEPEPGLEEEADEPEPEEPEECFTDECIARWPCLTFDVSQGRGKK
WWNLRRACFTIVENDYFETFIVFMILLSSGALAFEDIYIERRRTIKIILEYADKIFTYVF
IIEMLLKWVAYGFKTYFTNAWCWLDFLIVDVSLVTLGANWMGYSDLGPIKSLRTLRALRP
LRALSRFEGMRVVVNALIGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYRCINTTTDV
IFPMTEVNNKSDCLALQLATQEARWVNAKINFDNVGLGYLSLLQVATFKGWMDIMYAAVD
SREVEEQPSYEINLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGDDIFMTEEQ
KKYHEAMKKLGSKKPVKPIPRPTNMIQGVVFDFISQQFFDIFIMVLICLNMVTMMVETDD
QSVEKEDVLFKINLAFIVVFTGECLLKLFALRQYFFTIGWNIFDFVVVILSVAGIMLSDL
IEKYFVSPTLFRVIRLARIGRVLRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIF
SIFGMSNFAYVKKEAGIDDIFNFETFGNSIICLFEITTSAGWDGLLLPILNSVPPECDPD
LENPGSDVRGNCGNPGMGIMFFCSYIIMSFLVVVNMYIAIILENFNTAQEESGDLLCEDD
FEMFYETWEKFDPEATQFIEYAKLSDFCDTLLEPLRIAKPNRLKLISMDLPLVTGDKIHC
LDILLAVTQEVLGEGVEMTAMKVSIEAKFNMSNPTADSYEPITTTLRRKEEEAAAVVIQR
AFRKRLLKRSIRHASFMCRSKRQVRRVEDEEPPETDGLLARKMNVLYGSDLDLAAEMELA
GLQVQPSSQTQPSGPERTGREPTGSELSGPNISVVPVQVTSEVVLHSSPYSRSPQSINIL
RESIV
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atggcagacctgctccctcccacaggcgccgacgcgttccgccgcttcaccccggaatca
ctggcggagatcgagaggctcatggaggagaagaaacgagccatgcaagtagaggggtac
gtagaccctggcccgtcagaacctagcaaagacctagaggctggtaaaagtctgcccatg
atctttggagacgctccaacggagatgctcaacacaccgctggaggatatagaccccttc
tataaagcaaagaagacctttatcgtgatcaccaaaggaaacacaatcttcaggttcaat
gctgagccatcttgctacattctaagccccttcaatcttcttagaagaggagccatcaaa
attctcatacattcgttcatcatgattactatactgtcaaattgcttttttatgacgatg
agcgacccaccgtcatggagtaaaactgtggagtatgtttttactggtatttataccttt
gaggcctcatgcaaagtgctgtcaagaggctttgtggtcggaccttttacattccttcga
gatccatggaattggctggatttcatggtgatcagcatggcgtatgtcactgagtttgtt
gatttaggcaatgtgtcagccctcaggacgttccgtgtacttcgagcccttaaaacaatc
actgtgattcctggtttaaaaaccattgtgggtgccctggtacagtctgtgaagaaaatg
ggggacgtgatgattctcactgtgtttgccctggccgtctttgctctcatcggcctccaa
ctcttcatgggaaaccttcgcaacaagtgtattcgatggcccctcctcaactcaactgtg
tttgattacaaccccaccttgtttttcaatgacaccatgggtttcagcgaaacgatgaat
tccactatcccttttgatttccaggagtacatcaacaatgaagagaatcactactttctg
gaaggcagtctggatgcccttctttgtggaaacagctctgatgctggaaagtgcccagaa
ggatacacatgcataaaggctgggagaaaccccaactacggctataccagctacgactct
tttggctgggccttcttatccctcttccgactaatgacacaggactactgggagaacctg
ttccaactgacccttcgagcagcagggaagacctacatgatattttttgtgctagtcatc
ttcctgggttccttctacctcatcaaccttatccttgctgtggttgcaatggcctacgat
gagcagaatgtggccactctaaaagaggcccaggacagggaggaggagtttcagaggctg
ctggaacaatacagaatccaagatcagcttgctgctgctgctgctggaagtcaggcaacg
cttacgagtcggaaagagcttagtctccattcagggtcacacggcgggtctgcggatgac
gaacaaagcgtcggagaagacatcatcaaggactgtaatgggagaattgtgcccaggctg
gctatcataccagtgtcttctgagtcagaggcagttacagaggaaggaagtaaagtggat
agcatgcttcatgtggagcagccgggcctgaagaacagatcggccagtgctattagtgtc
ctcagcgctgtcatagaggagatggaggatgcccagaagccttgtccacctggctggtac
aagtttgcagacatgtttctgaagtgggactgttgcgttccctgggtgtggttgaagaag
tggttgctctttattgtgatggacccctttgtggacctaggcattaccatctgcatcgtt
ctcaacaccctcttcatggcaatggagcatttcccaatgagcccagagtttgaccacatg
ctctctgtggggaacctggttttcactgggatcttcactgcagagatggtctttaagctt
tgtgccatggatccctactactacttccaggttggctggaatgtttttgacagcattatc
gtcacgttcagtctggtggagttaggtctagccaatgtccaaggcctgtccgtcctcagg
tccttccgtttgctgcgtgtctttaaacttgccaagtcttggcccacgctcaacatgctg
atcaagattattggcaattcggtaggcgccctgggcaacctgaccctggtgctggccatc
attgtcttcatctttgctgtggtgggcatgcagctgtttggcaagagctacaaggagtgt
gtgtgtaagatcgccatcgactgcaagttgccgcgctggcacatgcacgacttcttccac
tcattcctcatcgtttttcgcatcctgtgcggggagtggatcgagacaatgtgggactgc
atggaagtggccggagccgggatgtgcctcgtggtcttcatgatggtcatggtcattgga
aacctggtggtgttgaacctgttccttgccttgctgctcagctcgttcagtggagacaac
ctgtccagtgatgatgatggtgagatgaacaatctccagattgccatcggcaggatcaac
tggggcattgactgggtgaaagcttttatccggcgcaaggtccttcagctacttggcaaa
aaatcccctggagatgaggaaggagttgagggggttgaaggaactcctgaaaaagaggct
gttgcactaaaccatttggacacgggccaggattgcaagacgctcaacaagatgagcaat
tgtgttgagggacttcaggctgacggtgatgtgagcctcacagttcccatagcccaggtg
gagtcagactttgagaatgatgatgatgacagtgggtcattaagaacagaagaagaaaag
gaacaagctgaacacataaatgtaccgatcaatggcaaaataaagaaggtaaagttactc
tgcttaaactatgattcctctgtgtgcagcactgtggactatgtacccgaaccagagcca
ggactagaggaagaagcagatgagccagaaccagaggaaccagaagaatgctttactgat
gaatgcatcgcgagatggccgtgcctgacgtttgacgtctctcaaggcagaggcaagaag
tggtggaatctccgcagggcctgttttaccatcgtagaaaatgactactttgagaccttc
attgtcttcatgattctcctgagcagtggcgctctggcttttgaggatatttacattgag
aggagaagaacgattaaaattatcctggagtatgcagataaaatcttcacctatgtgttt
atcattgagatgctcttaaaatgggtagcgtatggcttcaagacgtacttcaccaatgct
tggtgttggttggacttcctcattgtggatgtttccttagtcactctaggagctaattgg
atgggctactctgaccttggaccaatcaaatctcttaggacactcagagctctaaggcca
cttcgagccctgtcacgatttgaagggatgagggtggtggtgaacgcactcatcggcgcc
atcccctccatcttcaatgtgttgttggtgtgccttatcttctggctcatcttcagcata
atgggagtcaacctgtttgccggaaagttctaccgctgcattaacaccaccacagatgtc
attttccccatgacagaggttaacaacaagagcgactgcttagctctccaacttgctacc
caggaagcacgctgggtcaacgccaagatcaactttgacaacgtgggcctaggatacctt
tctcttctgcaagtggcaacatttaaaggatggatggacatcatgtatgctgcagtggac
tctcgagaggtggaggagcagccctcatacgagataaacctgtacatgtacatctacttc
gtcatcttcatcatctttggctctttctttacactcaatctctttattggtgtcattatt
gacaatttcaaccagcaaaagaaaaagttcggtgacgacatcttcatgacagaggagcag
aagaaatatcatgaagccatgaagaaacttggctcgaagaagccggtgaagcctatccca
aggcctacgaatatgatccaaggcgtggtgtttgatttcatcagtcaacagttctttgac
atcttcattatggtcctcatctgcctcaacatggtcaccatgatggtggagacggatgac
cagagtgtggagaaggaagacgtcctcttcaagatcaacttggccttcatcgttgtcttc
accggcgaatgtctgctcaagctatttgcccttcgccaatattttttcacgatcggatgg
aacatatttgacttcgttgtggtcattttgtccgtcgctggtataatgctgtctgacctc
atagagaagtactttgtgtcacccaccttgtttagggtcatcaggcttgctaggataggc
agggtcctgcgtctcatcaaaggggccaagggcattcggacgctattgtttgcgctgatg
atgtcacttcctgccctgttcaacattggcctcttgctcttccttatcatgtttatcttc
tccatctttggcatgtctaactttgcctatgtcaaaaaagaggccggcattgatgacatc
ttcaattttgagacgttcggcaacagtattatctgcctttttgagatcaccacctcagcg
ggttgggacggccttctgctgccaattctaaacagtgttcctccagagtgcgacccagac
cttgagaacccaggctctgatgtgcggggcaactgcggcaatccgggaatgggcatcatg
tttttctgcagttacatcatcatgtccttcctggtggtggtcaacatgtacattgccatc
atcctggagaactttaacacggcccaagaggagagcggggacctgctgtgcgaggatgac
tttgagatgttttatgaaacctgggagaaatttgacccggaggcaacacagttcatagag
tacgccaagctttcagacttctgtgacaccctgctggaacctctacgcatcgccaagccc
aaccgacttaagctgatttctatggacctgccgctggtcaccggcgacaagatccactgc
ctggatatattgctggctgtcacccaggaggtgctgggagaaggggtagagatgacagcc
atgaaagtgagcattgaggccaagttcaatatgagcaaccccacggcggactcatacgag
cccatcaccaccacacttcggcgcaaggaggaggaggcggcggccgtggtcatccagcgg
gccttccggaagcgtctgcttaagcgttccatccgacatgcttccttcatgtgccgttcc
aaaaggcaggtgaggcgagttgaggatgaggagcccccggagacggatggactgctagca
cgcaagatgaacgtactctatggtagcgacctggacctggcagctgagatggaactggct
gggttacaagtgcagcccagctcgcaaacacagccctcagggccggagcgcacaggacga
gagcccacagggtcagagctgtccgggcccaacatttcagtggtccccgtgcaggtcacc
agtgaggtggtgttacactcctccccttattcgcgtagtcctcaatcaataaacatcctg
cgtgagtcaattgtataa
DBGET
integrated database retrieval system
