Esox lucius (northern pike): 105009540
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Entry
105009540 CDS
T04894
Symbol
tdg
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
els
Esox lucius (northern pike)
Pathway
els03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105009540 (tdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
els03400
]
105009540 (tdg)
Enzymes [BR:
els01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
105009540 (tdg)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
105009540 (tdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Adaptin_binding
Motif
Other DBs
NCBI-GeneID:
105009540
NCBI-ProteinID:
XP_010867259
UniProt:
A0A3P8XBM0
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Position
LG19:complement(37032527..37041391)
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AA seq
479 aa
AA seq
DB search
MEEKLYGSLPVPSEYLQQWIQSTQQLQALQGQYPGINHQYSPHPHYVEAPREERVMAHAQ
MAVNPESLAQEEPTNLAKAPAKKRGRPAQPKEPKPPKMPKPPKEPKPPKPPKEPKPPKEP
KAPKAKPGPKPKKGKEGQEADSTQEKIDETFKKVKKKRDRFKGMTEDEVMNRTLTDILDY
NLDYVIIGINPGLVAAYVGRWFPGPGNHFWKCLFLSGFTDEQLNHLSDTSLPAKYKIGFT
NMVARTTPGSKDLSTKELREGALILVEKLKKYKPLIAVFNGKCIFEMFCRELFGKKPKKL
DFGLQPHKIPDCDVALYLMPSSSARCAQFPRAQDKVHFYIKLRELRDQLRGVARSDEIQE
LEYTFDLGLAKEDAKRMAIKEEAYDPGYEAAFGGAYVEEGPGPEEGQSNGHCNFSSTDNT
SQPNETPDAAEKVNASQPTAVATAAEGKLPDGQWMVQSFADQIPDIGGSKEPQAWAGDV
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagctgtatggatcactgcctgtcccctcggaatatctacaacagtggatt
cagtccactcaacagcttcaagctttgcaagggcagtatccgggcatcaaccaccaatat
agccctcacccacactacgttgaggcaccaagagaggagagggtcatggcacatgcccaa
atggctgtcaatcctgagtccctcgctcaggaagagcccaccaacttagctaaagctcca
gctaaaaaacgagggagaccggcacaaccaaaggaacccaagccaccaaaaatgccgaag
cctcctaaggagcccaaaccacccaaaccgcccaaggagcccaaaccgcccaaggagccc
aaagcacccaaggccaaaccaggacccaagcccaagaaagggaaagaaggtcaagaggcg
gacagcacacaggagaagatagacgagaccttcaagaaggtcaagaagaaaagggaccgc
ttcaagggcatgacagaggacgaggttatgaacagaactctgactgacatccttgactac
aacctggactacgtcattattggaataaacccaggtctggtggcagcctatgttggacga
tggttccctggcccagggaaccatttctggaagtgcctcttcttgtctggattcacagac
gagcagctcaaccatttgagtgacaccagcctgccagcgaaatacaagattggctttaca
aacatggtggccaggacaacgcctggaagcaaagacctctcaaccaaagagctacgtgag
ggtgccttgattcttgtagagaagctgaaaaagtacaagcccctcatagcagtttttaat
ggaaaatgtatctttgaaatgttctgcagagagttgtttgggaaaaagcccaagaaactt
gactttggtctgcagccacacaagataccggactgtgacgtggcgttgtatctgatgccc
tcgtcgagcgcacgctgtgcccagttcccccgtgctcaggacaaagtgcacttctacatt
aagcttagggaattgagggaccagctccggggcgtggcaagatcggacgagattcaggag
ctggagtacacgtttgacctgggactggccaaggaggacgcaaagaggatggcaatcaag
gaggaggcgtacgacccgggctacgaggcggcctttggcggagcgtatgtggaggagggg
cctgggccggaggagggccagagcaatgggcactgtaacttctcatccactgacaacacc
agtcagcccaatgagacaccagatgctgctgaaaaggtgaatgcttcccaacctacggct
gtcgctaccgccgcagagggaaaactcccagatggacaatggatggtgcagtctttcgca
gatcagattccagacattggtggctctaaggagccccaggcatgggcgggggatgtataa
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