Esox lucius (northern pike): 105010659
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Entry
105010659 CDS
T04894
Name
(RefSeq) protocadherin-15 isoform X1
KO
K16500
protocadherin-15
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
els03037
]
105010659
04515 Cell adhesion molecules [BR:
els04515
]
105010659
Cilium and associated proteins [BR:
els03037
]
Primary cilia and associated proteins
USH complex and associated proteins
105010659
Cell adhesion molecules [BR:
els04515
]
Cadherins
Protocadherins
105010659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
PCDH15_12th
ECD
Cadherin_CELSR2_9th
Cadherin_FAT4_N
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
105010659
NCBI-ProteinID:
XP_019903221
LinkDB
All DBs
Position
LG06:complement(18697529..18929143)
Genome browser
AA seq
2154 aa
AA seq
DB search
MRRGSCLFTWLGIGMAFLSLAVYSRAQDVEDWQYEACKLSRSGPPATIVTIDEESPNGTI
LVENMQINGRAEDPDRTIYLKLLDNFNYWVILDPLRQRLFLNSTGRVLDRDPPSSISTIV
VNVECTNRFVGTVILHEVRIVVRDKNDNTPQFQQPRYYMSISELTPVGATIFTGFSGNNG
ATDIDDGPNGQIEYGIQYNPNDPVSNKTVVVGNTLSGDIVLAERLNYEERTRYLVIVQAN
DRAPFAANRRTATTTLTIDVLDGDDLGPMFLPCFLVNNTKDCNPLTYRVTIPELIPPIKL
NPLEVIPPIKAEDMDQNIQPPTDRPRIHYFILVGQPSTFPEYFSLNRTTAELLLLKPVNR
DLHTRFTLRIKAEQDNGHPLPAFADLIIDILDVNNQAPYFQFQSYQGYVSESSPVGTTIS
GNFNLTAPLGIMALDNDIEESKDPMLTVTLDDFSSIFAITLTGITRYLRLLKPVDREMQM
TYTFTMIASDGVQQSTRVTVNVLVIDANDNTPTFGEVSYSVKVFTDMQPGETVLQLTALD
ADEGLNGLVTYEILAGAQGDFIINNRTGRITITPGIALSVGRSYALTVKATDSAPEVQRR
SSITTVYIEVLPPNNQSPPRFPLLTYNVEVSEAMRIGAILLNLQATDRENDPIMYQILSG
DVQQVFNLSKTIGLLLLGKPLDRETTDQYRLIVTASDGNPGGTSTTTVIIVVTDVNDNDP
KFDPTMTRNLTVQEEKANVFVGQVKATDPDAGANGQVHYRIVNHPDLFTVNENGSIFTAV
PLDREFRGQYDLVVEASDGAVDPRRTMVTLSVQVTDIDDNSPEFSQKTYLVNVPENSPVG
TVVLRLSAVDADLFSNVTYRIKSEEASQLFLVNPITGELSVLQTLDFESLANMGMGATYT
FLVEAVDQLGTMPPGQATVTVRITDMNDFSPVFSQALYKGLVAPNAEKGTVITTVFAEDQ
DPPGTPASQVRYRVDEEKSPYSGSIFDVEEESGRVITKVNLNEQPSITFKLVVIAFDNGE
PVKDNRTLVEITVLQPSRIPIFTEEEYRFAPVSELAPVGRPVDSILAAAINQTIFYSIVG
GNERGDFQVNNRTGVISTAKPLDYETVTSYVLRVQADSMIVVVAQLRVPSKTNTAKVFIE
VKDENDHPPVFTRTLYIGGVAEDAKTFSSVLKIVATDVDTGNYSANAYRLIIPPSADGQD
SFVIEQYTGIIKTAIMYRNMRRSYFKFEVIATDDYGKGLSSSAGVVVSVVNQLDMQVVVS
NVPPTVVEENKEQLIAILERYVQDQIPGAKVVVESIGPRRFGDGFDQEDYTKSDLMVYAI
DPLTNRAISRQELFKFLDGKLLDINKEFQPYLGQGGRILEIRTPDIVASVKKAAQAVGYT
EGALLALAIIIILCCIPAILIVMVTYKQFKERQAECAKTARIQQALPAGKSAAPRAPTAN
LYEELGDSSMRGYGRQQQQLLRPSLLRPEELSMESGIDPGQDYYRDDYYNYDQGYDLPQY
GSRRKLISPVYDEYGDVIMEDEFYSPRGSEGRGRGRGRGRGQGGKRVGFRDLPPDDEIEQ
TGAGEGEEPCEPSLAAKRMKSVMKLSKLLAAGKSGDKMAAAGEAGLSPWKKAKMFKMFGA
KKDKDYAKLMSARRIDSQESLTGGPAADVPVDTTRSRLSKVMKRINLSNRLKMRRKSQSS
ISRSSATGSEKDEDASRAATSDEEKSKVSISVTEESEPEASGSGKGKGSDEESESSSVAP
STEDKDYLKVDLDRDDTNESTVDSEEEPEEHPDDSDDESKSKSDGDETEKEHDTEKESGT
EKESDSEKESGSAGTEKGSESEEGSDSESGSDSEKESDSEKESDSVKESETEKESGTEKS
GSESSTEKVSGTERDSDEESEEDEGSRESSTRSSMKSSGTATERSSGGTHGSMKSSASGI
SGGRDSGSGSISGSRTGSAASQHGSSIISSSSTRGSEMSSTGSKTGKEGASESSSGSSVY
SGGSQSQLSGSEDSESLPGSERSSTSSRSTGGSRKSILTHSSQETIDEESEEENEEQSEQ
EGSAVNESKESTDELSDSSASRRSSIVSAGEGPSHSPYAGTLHGSDFSSTEEASEETFGG
LSPITEVDEDAITQSEKSSLSDTSSKGSAVRSQSGATEETTDANSESEGNSTAF
NT seq
6465 nt
NT seq
+upstream
nt +downstream
nt
atgcgacggggctcatgtctcttcacgtggctggggattggcatggcgttcctctctctg
gccgtctatagtagggcccaggacgtggaagactggcagtatgaggcatgtaaactgtcc
cggtcaggccctccagctaccatagtgaccatagatgaagagagcccaaatggtacaatt
ctggtggagaatatgcagatcaatgggagagcagaggacccagacaggaccatctacctg
aaactgctggacaacttcaattactgggtcatcctggatcctctcagacaaagactgttt
ctcaacagtactggacgtgtcctggacagagatcccccctcctccatatctactattgtg
gtgaacgtcgagtgcaccaataggtttgtggggacagtaattctccacgaggtccgcatc
gtagtcagggacaaaaatgacaacacgccgcagtttcagcagccacgctactatatgtcc
atcagtgagctcactcccgtcggggccactatattcacaggatttagtggaaacaacggg
gctacagacatcgatgatgggccgaacggacagatagaatatggcatccagtacaacccc
aacgacccagtgtctaataaaactgtggtcgtggggaatactctctctggggacattgtt
ctggctgagagactcaactatgaagagagaactcgctacctggtgattgttcaagccaac
gaccgtgccccgttcgctgccaacaggcggactgctaccaccacgctgaccatagatgtt
cttgacggcgatgacctcgggcccatgttcctgccctgtttcctggtcaacaacaccaag
gactgcaaccctctcacctatcgtgtcaccataccagagttgataccaccgattaaactg
aacccactggaggtaatcccacctataaaagcagaggatatggaccaaaacatccagcct
cccactgacaggccaaggatccattacttcatactggttggtcagccctcaacgttccca
gagtacttctccctgaacaggacaaccgcagaactccttctcctaaaaccagtcaacaga
gacctacacaccagatttaccctcagaatcaaggctgaacaggacaacggccaccctctc
ccagccttcgctgacctgatcatagatattctggatgtgaacaaccaggctccatacttt
cagttccagtcttaccagggctacgtcagcgagtcgtcccccgtgggcaccaccatctct
ggcaatttcaacctcactgctcccttaggcattatggccctagacaacgacattgaagag
agcaaagaccccatgttgacggtgactctggacgacttcagcagcatatttgccataacc
ctaactgggattactcgctacctcagactcctcaagcctgtggacagagagatgcagatg
acctacaccttcacaatgatagcttcagatggagtacagcagagcaccagggtgactgtc
aatgtgctggtgattgatgccaacgacaacactcccacctttggcgaggtctcctacagc
gtcaaggtgtttactgacatgcagccaggagaaacagtactacagttgacagcattggat
gctgatgaggggttgaatggtctggtgacttatgagatactggctggagcacagggtgat
ttcatcatcaataaccgcaccggacgaatcaccatcacacctggcatagcccttagcgtg
ggacgttcttatgctcttacagtaaaggctacggatagtgcacctgaggtccagagaagg
agctctataaccacggtgtacattgaggtcctgccccctaataaccaaagccccccacgc
ttccctctactgacctacaatgtagaggtcagcgaggcaatgaggataggagccattctg
cttaacctacaggccacagacagagagaatgacccaatcatgtaccagatattgagtggg
gatgtgcagcaagtcttcaatctctctaaaactataggcctgctgcttttggggaagcct
ctggacagagaaaccactgaccagtaccgtctcattgtcactgcctctgatggcaaccca
ggagggacctccaccaccacagtgattatagtggtgactgacgtgaatgataacgacccg
aagtttgacccaaccatgaccaggaacctcactgttcaggaggagaaggccaacgtgttt
gtgggtcaagtcaaggccacggatccagatgccggtgctaacggtcaggtgcactaccgg
atagtcaatcacccggaccttttcaccgtcaacgagaatggcagcatcttcaccgccgtt
cctctggaccgggagttcagaggtcagtacgacctggtggtggaggcctcagacggggct
gtggatccccgaaggactatggtcacactctctgtccaggtgaccgacatcgacgacaac
agtccagagttctcgcaaaagacctacctggtcaacgtgccagagaacagccctgtggga
actgtggtgctgcgcctcagtgcggtggatgcagacttgttctctaatgtgacataccga
atcaagtctgaagaggccagccagcttttcttggtgaacccgatcaccggcgagctgtcg
gtgctgcagaccctggattttgagagcctagctaatatgggcatgggggcaacatatacc
tttctggtggaggccgtggaccagttagggaccatgcctcccggtcaggccactgtcact
gttaggatcacggatatgaatgacttttccccagtgtttagccaagcgctttataagggc
ttggtggcccctaacgcagaaaaaggaacggtcattaccactgtttttgccgaggaccaa
gaccctcctggtactccagccagtcaggtgcgctacagagtggatgaggagaaatcccct
tacagtggtagcatttttgatgtggaggaagagtccgggagagtaatcaccaaagtcaac
ctcaatgaacaacccagcatcaccttcaagctggttgtgatagcctttgacaatggagag
ccagtgaaggataaccggaccctggttgagatcactgtcctccagccatctagaatcccc
atattcactgaggaggagtacaggtttgctcctgtcagtgagttggccccagtaggcaga
ccagtggacagcatcctggcagccgccatcaaccaaactatcttctactccatagtggga
ggaaatgaacgcggtgatttccaagtgaataatcggacaggtgtgatctctacagctaaa
ccgttggattatgaaacggtcaccagctacgtgctgagggtacaagctgactccatgatc
gtggtcgttgcccaactacgggtcccctccaaaaccaacacagctaaggtgtttattgag
gtaaaggatgagaacgaccacccccctgtcttcaccagaaccctttacattggtggtgtc
gctgaagacgcaaagaccttctcttctgttctaaagatagtggctactgatgttgataca
gggaactacagcgccaatgcataccgcctgatcatcccaccttcagcagatggtcaggac
agctttgtgatcgagcagtacacaggcatcatcaagacggctatcatgtaccgtaacatg
cgtaggtcctactttaagtttgaggtgattgccacggacgactacggaaagggcctgagc
agtagcgctggtgtggtggtgtctgtggtcaaccagctagatatgcaggtggtggtgtcc
aatgtcccacccactgtggtggaggagaataaagagcaacttattgctattctggagcga
tatgtccaggaccagattccaggggccaaggtggtggtggagtccatcggcccacggagg
tttggagatggatttgaccaggaggactacaccaaatcagacctgatggtgtacgccatt
gacccactcaccaaccgggccatctcacgccaggagctctttaagtttctggatgggaag
ctgctggatatcaacaaggagttccagccctatctgggtcagggaggacgcatcctggag
atccgcacacctgacatcgtggcgagcgtgaagaaagccgctcaggccgtgggctacaca
gagggggccctccttgccctcgctataatcatcatcctctgctgcatccctgccatcctc
atcgtcatggtcacctacaaacaattcaaagagagacaggctgaatgtgccaaaactgcc
aggattcagcaggctcttccagctggcaagtctgctgccccacgtgccccaaccgccaat
ctatatgaagaactgggtgacagcagcatgagaggatatggcagacagcaacagcaactg
cttaggccatctctgctgagacctgaggagctctctatggagtcaggaattgacccaggc
caagactactacagggatgactactataattacgatcaagggtatgaccttcctcaatat
ggcagtcgccggaagctgatatctcctgtgtatgatgagtatggagatgtgattatggag
gatgaattctacagccctcgtggatctgaggggcgaggcagagggcgtggaaggggtcga
ggtcaaggaggcaaaagggtgggattcagggaccttccaccagatgatgaaattgagcag
acaggggcaggagagggtgaggaaccctgcgaaccttccttggctgcaaagagaatgaag
tccgtcatgaagctcagcaagctgctagcagccggtaagagtggagacaaaatggctgca
gccggagaagcaggcttgtctccctggaagaaggcaaagatgttcaagatgtttggtgca
aagaaggacaaggactacgctaaacttatgtcagcccgtcgcattgacagccaagagagt
ctgacggggggacctgctgctgatgttcctgttgacacgaccagaagccgattgagcaag
gtgatgaagcgcatcaacttgagcaacaggctgaagatgaggagaaaatcgcagagcagt
attagtcgaagttctgccacaggcagcgagaaagatgaagatgcttctcgagctgccact
agcgacgaggagaagtccaaggtgtccatcagtgtgactgaggaaagtgaaccagaggcg
agtggaagtgggaaggggaagggttctgatgaagaatcagagagcagcagtgttgctcct
tctactgaggacaaagattacttgaaggtggatctggaccgagacgataccaatgaaagc
actgtggactcagaagaggagccagaagagcacccagatgattctgatgatgagagcaaa
tccaagtcagacggtgatgagaccgagaaggaacatgacacagaaaaggaatcagggacg
gaaaaagagtcagattcagagaaagagtcaggctcagctgggacagagaagggatcagaa
tctgaggaaggttctgattcagagtccggttctgactcagaaaaggaatcagattctgag
aaagagtctgacagcgtaaaagagtcagagacagagaaagaatcaggaactgaaaaatca
ggaagtgaatccagtacagagaaagtctctgggactgagagagattctgacgaagaatct
gaagaagatgaagggtctagggagtcctccactcgatcttctatgaaatcatctggcacg
gctactgagcggtccagtggcgggacacatggtagcatgaagagcagtgcatctggcatc
agtggtggtagagacagtgggagtggtagcattagtggtagccgcacaggcagtgctgct
tcccagcatggttcttccataatatcttcatcaagtaccagaggctcagagatgtcaagc
acaggcagtaagacaggcaaagaaggggcgtcagagtcttcatcaggaagctctgtatac
agtggaggcagccagagccagctatctggatcagaggacagtgagtctctaccgggcagt
gagaggagctccaccagctccaggtccaccggaggcagccgcaagtccatcctgactcac
agctcacaggaaaccatcgatgaggagagtgaagaggagaacgaagaacaatcagagcag
gaaggtagtgcagtcaatgagagcaaagagtctacagatgagttgagtgacagttcagca
tccagaaggtccagtattgtgtctgctggagaagggcccagccacagtccctatgctgga
acgctccatggatcagatttcagcagcacggaagaagcctcagaggagacatttggagga
ctttccccgatcacagaggtagacgaggatgccattacacaatctgagaaatcctcactg
tctgacaccagtagcaaggggtcagctgttagatcccaatctggagccacagaagagaca
accgatgcaaattcagagtctgaagggaactccacagccttctga
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integrated database retrieval system
