Esox lucius (northern pike): 105012009
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Entry
105012009 CDS
T04894
Name
(RefSeq) HLA class II histocompatibility antigen, DQ beta 1 chain
KO
K06752
MHC class II antigen
Organism
els
Esox lucius (northern pike)
Pathway
els04145
Phagosome
els04514
Cell adhesion molecules
els04672
Intestinal immune network for IgA production
els05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105012009
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105012009
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
105012009
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105012009
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
els04147
]
105012009
Exosome [BR:
els04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105012009
Exosomal proteins of epithelial cells
105012009
Exosomal proteins of breast milk
105012009
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
C2-set_2
C2-set_3
Ig_3
MHC_II_beta
Motif
Other DBs
NCBI-GeneID:
105012009
NCBI-ProteinID:
XP_028978176
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Position
LG09:complement(6889500..6897671)
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AA seq
245 aa
AA seq
DB search
MMACLRSYLLSIGMISIFTPNAGHFYTIHHLCFFRGEETEYILREISDMTKVLEYNSTLN
RFTGFTPLGISNAERFNKDTLLLAFMEDVLNFYCKDYRANFTRLVETHVEPSVHLRSMKP
QSSTHTSMLKCSAYKFFPKKIRVTWLRDGQEVPMSSNEELANGDWFYQIHSYLEFTPTSG
ENISCMVEHPSLTEPMILHWDASLPESERSKTVIGVSGLVLGVVFTAAGLVHYHRRKYSS
VGADM
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttgcttgcggtcttatttgttgtccataggcatgatttcaatcttcactcca
aatgctgggcacttttacaccatccaccatctttgttttttcagaggggaagaaactgag
tacattttaagagaaatttcagacatgacaaaggtgttggaatacaacagcactctcaac
cgattcactgggtttaccccgttagggatatctaatgctgagagatttaacaaagatacc
ttacttctggcctttatggaagatgttttaaatttttactgcaaggattatagggccaac
tttactagattggttgaaacccatgttgagccctctgtccatcttcgatccatgaagccc
caaagcagcacacacacatccatgctaaagtgcagcgcctacaagttcttccccaaaaag
atcagggtgacctggttgagggatggacaggaagtgcccatgtcatctaatgaggagctg
gcgaatggtgactggttctaccagatccactcctacctggagttcacgcccacatctgga
gagaatatctcctgcatggtggaacaccccagcctcaccgagcccatgatcctccactgg
gatgcgtccctgcctgagtctgagaggagtaagacagtgattggagtgtctggtctggta
ctgggggtggtctttactgctgccgggctcgtccactaccacaggaggaagtacagtagt
gttggtgccgacatgtga
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