Esox lucius (northern pike): 105020171
Help
Entry
105020171 CDS
T04894
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
els
Esox lucius (northern pike)
Pathway
els04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
105020171 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105020171 (irf5)
Transcription factors [BR:
els03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
105020171 (irf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
105020171
NCBI-ProteinID:
XP_010885243
LinkDB
All DBs
Position
LG23:complement(17895459..17907037)
Genome browser
AA seq
492 aa
AA seq
DB search
MSVQPRRIRLKPWLLAQVNSGRYPGLQWLGQDQRLFQIPWKHATRHLPTSEEENTIFKAW
ALETGKYQEGLDEPDPAKWKANLRCALNKSREFKLKYDGTKETPVQPVKIYEVCDQPYNG
DTVDEDDEEMPNIVELSIDPRISAVHSVPFTHMHPAVNGGLTVGEELPPPIMAPPEFPSH
IPLEHGGFIHSGPTGPSNEMAGGGMPPVVTEVPPMVPSEPPVAPIAPNSATVEAMAGVQN
QEEGQAGFPYKYDLLNSLPLTDLDMKFQYRGRMMGSLTVSNPQGCRLYYGHLEPTPEQVD
LFGPVTLNQVLFPGSADIQNEKQRFYTEQLLDVMDRGLILEIWEQDIYAIRLCQCKVYWS
GPGVDEHGPPNPMERERKYKVFSLNNFLHGLILFQKGEAPTPPPFELYFCFGEDWPDQRK
PKEKKLIIVQVIPVVARILTEMFSGELSWSTDSIRLQISNPDMKDHTVEQFKELQRLLQS
QYGQGPWATNAP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcagcctcggaggatccgtctgaagccttggctgttagcccaggtgaacagc
ggaaggtacccaggcttgcaatggctcggtcaggaccagcggctcttccagattccatgg
aaacatgccacgagacacctgcccacctctgaggaagagaacactatcttcaaggcctgg
gctctggagacagggaagtaccaggagggtctggatgagcctgacccagccaaatggaag
gccaacctgcgctgtgctctcaacaagagccgtgagttcaaactgaaatacgacggtacc
aaggagacccccgttcaacccgttaagatctacgaggtgtgcgaccagccctacaatgga
gacacagttgatgaagatgatgaagagatgccaaatattgttgaactctctattgacccc
aggataagtgctgtacacagcgttcctttcacccacatgcaccccgctgtcaacgggggc
ctgactgttggagaggaactccctccaccaatcatggctcctccagagtttccttcccac
atcccattggaacatgggggctttatacactcgggacccacgggaccctccaatgagatg
gccggagggggcatgcctcctgtggtcacagaggtgccccccatggtgccttccgaacca
cccgtggctccgattgcccctaactctgctacagtggaggccatggctggagtccagaac
caggaagagggccaggctggattcccctacaaatatgacctgctgaacagtctgccattg
actgacctggatatgaagttccagtaccggggtcgcatgatgggctccctgacggtcagt
aacccccagggctgccggctctactacgggcacctggagcccacaccagagcaggtggac
ctgtttggcccagtcaccctcaaccaggtcctcttccccggctcggctgacatccagaac
gagaagcagaggttctacactgagcagctgctggacgtgatggaccgaggcctcatcctg
gagatctgggagcaggacatatatgctataaggctctgccaatgtaaggtgtactggtct
gggcccggtgtggatgagcatgggcctcccaaccctatggagagggaaaggaagtacaag
gttttcagcctcaataacttcctgcatgggctcatcttgttccagaaaggggaagctcca
acccctccccctttcgagctctacttctgctttggagaggattggcccgatcaacggaaa
cccaaggagaagaagctcatcattgtgcaggtgattccagtggtggctcggatcctgacg
gagatgttttccggagagctgtcctggtccacagacagcatccgactgcagatctccaac
ccagatatgaaggaccacactgtggagcagttcaaggagctccagaggctccttcaaagc
caatatgggcagggaccgtgggccaccaacgcaccctga
DBGET
integrated database retrieval system