Esox lucius (northern pike): 105023313
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Entry
105023313 CDS
T04894
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
els
Esox lucius (northern pike)
Pathway
els04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105023313 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105023313 (c9orf72)
Membrane trafficking [BR:
els04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
105023313 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
105023313
NCBI-ProteinID:
XP_010890707
UniProt:
A0A3P8YB20
LinkDB
All DBs
Position
LG15:complement(17695157..17706679)
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AA seq
461 aa
AA seq
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MSSGPPQSPAVAKTEVTVEGECPLLAATFAYWDNILGPRVRHIWAPRCEQPLLLSDGEVT
FLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQTE
LAFYLPLHTVCVERLKHIIRKGRIWMQKGYNIISVLTSEIVPIMELLSSMKTHSVPEDID
IKDTILNDDDIGDSCHEDFLHKAISSHLQTCGCSMVVGSNSDKVNKIVRTLCLFLTPAER
KCSRLCKADSSFKYDTGLFVQGLLKDSMGSFVLPFRQVLYSPYPTTHIDVDINTVKQMPP
CHEHTYNQRRYMRSELSALWKAASEEDIAPDTVIHTDEFFTPDLNIFQDVMHRDTLVKSF
LDEVFMLKPGLNLRSTYLAQFLLILHRKALTLLKYIEDETQKGKKPFRSLRSLKTDLDLM
VEGDLNIIMALAEKLRAGLHSFVFGKPFYTSVHERDVLMSF
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccggcccacctcagtcacctgcggtggctaagacagaggtaactgtcgaagga
gaatgtccgctccttgctgcaacctttgcctactgggacaacatcctcggcccacgggta
cgccacatctgggctccccggtgtgagcaaccactgttgctaagtgatggtgaggtcacc
ttcctggccaatcacacattgaatggggagattcttcgcagtgcagagtgtggagcggtg
gatgtcaagttctttgtcctagctgagaagggtgttatcatcgtatccctcatatttgat
ggtgaactgaagggggacaagaacacatgtgccttgtccatcatcttgccacagacagag
ctggctttctacctgcccttgcacactgtctgtgtggagaggctaaaacacataatccgc
aaaggacgcatctggatgcagaagggatataacataatttctgtgctgacgtcagagatt
gtccccattatggagctgctgtcctccatgaagacacacagtgtcccagaggatatagat
atcaaggatactatcttaaatgacgatgacattggagacagctgccatgaagatttcttg
cacaaggcaatcagttctcatcttcaaacctgtggctgctccatggtagttggaagcaat
tcagacaaagtcaacaagatagtacgcacactgtgcctcttcctcacacctgctgagagg
aagtgctctcggctctgtaaggctgactcctctttcaagtacgacacaggactgtttgta
caaggtctcctcaaggactccatgggcagcttcgtcttgcccttccgccaggtgctgtac
tcaccctaccccaccactcacatcgacgtggacatcaacacggtgaagcagatgccgccc
tgccatgagcacacttataaccagcgccgctacatgcgctctgagctcagcgccctctgg
aaagcagctagtgaggaggacattgctcctgacactgtcatccacaccgacgagttcttc
acccctgacctaaatatctttcaggacgttatgcatagagacaccctggtgaagtcattt
ttagatgaggtgttcatgctaaagccaggcctcaatctgcgaagtacttacttagcccag
ttcttgctcatacttcacaggaaagcactcacactactcaaatacattgaagatgagaca
caaaagggaaagaagcctttccgctccttgcgcagcttgaagacagacctcgacttgatg
gtggaaggtgatctgaatatcatcatggcactggctgagaagctgagggctggattgcac
tcatttgtatttgggaagccattctacaccagtgtgcatgagcgtgatgtgctcatgagc
ttttga
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