Esox lucius (northern pike): 105023359
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Entry
105023359 CDS
T04894
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
els04040
]
105023359
Ion channels [BR:
els04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105023359
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Lustrin_cystein
DUF6191
Motif
Other DBs
NCBI-GeneID:
105023359
NCBI-ProteinID:
XP_010890795
LinkDB
All DBs
Position
LG11:complement(16977377..17017357)
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AA seq
1705 aa
AA seq
DB search
MPTRMITLLEAWKRNRAFPRKKAKDLKICPRLLPLLRDPGVVASLAKQNAKMVTLLPPTG
TPVFRQFTPESLTEIDRRIEEEAKEQDRKLALNIEVAEEDPPKPSADLEAGKALPFIYGD
PPAELLNTPLEELDPFYKSRKTFIVITKGNTIFRFNAAPACYILSPFNLLRRGAIKILIH
SLFSMFIKLTLLANCMFMTMSDLPEWYKTVEYVFIGIYTFEAAIKVFSRGFCVGQFAFLR
DPWNWLDFMVISMAFITEFFDLGNISVFKTFIVVRILKIIPLVSGLKNIVGSLIQSVKKL
ADAMLITSFCLAVFALVGLQMFMGNLQQKCVRFPLNTTMYIGNDTWDYNEHINNEVNYYY
FPGMKDPLLCGNSSDAGECPSGYTCIKAGRNPNYGYTNYDSFGWAYLSLFQLMTKDFWEN
LLQLTLRSAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYAEQNEATMAEAKEKEAEYAR
IMEQLMERKKAECSAVLRRPSEDQESKEQMKVAGQQKKTPISPRVYNQDDMDDMEVDPRP
CSPCWYKFSDIFLKWNCCVPWVTFKRWMYLIVMDPFVDLGITICIILNTIFLALEHYPMT
AEFEEVLSFGNLVFIGIYTAEMVLKVIALDPYYYFQSGWNILDSIIVALCLIELLLADFE
GLSVLRTFRLMRVFKTSIFWPAFKRMLKITSNSMRALGNHTLLLVIIVIFFSILGMQLFG
KSYADEVCKISEDCTLPRWHMHDFFHAFLIIFRVLCGEWIETMWDCMEVAGQGRCLIFYL
MVIVISNLVLLNLFMALLLSSFRGENMVDLEGDRERSNLHIAVRRITKGMNWTKVYIIKQ
FQIIVGKQKKENGDHDEHGFDKDVKDQTELKQLAVDNGSSICITGVNHSEVMEKEEEVDP
TSLENCWTEKCIGRCPCLDFDITTGKGKIWWNFRKTCFLIVEHSYFKTFILFMILMSSGA
LVFEDIHFEQRRTLKIILEYADQVFTCVFVFEMLLKWAAYGFKTYFTNAWCWLDFLILDV
SLVNLMANILGYSDLRPLRAFLPLRALSRFDGIKVVVNVLVGAIPSIFSVFLVCLIFWLI
FSIIGVNMFAGKFYRCFNMTSEERFPADIVNNKTECFELIAQNDNVRWMNAKVNYDNVGM
GYLSLLQIVTFKGWMNIMYDAVDSRRIEDQPIYEDNLFIYNYFVIFIFFGVFINLILFIG
VLIDNYNQQKKKLGGKNILMTEEQNKNYNAMKKLTKKPQKPVPRPTNKIAGLIFNLISQP
FFDLFIMVLICLSLVMMMVETDDQSLEAEEILYWINFGFIIIFIIECIIKLIGLRRFYFS
DGLNIVDFLVIILSVVGIFLSEIIEKYFFSPIIFRVIRLARIGRVLRLTRATKGIQSMLF
ALRMSLPAVFNIGQLLFLIMFFFSILGMFNFAYVKREAGIDDMFNFETFGNSIICLFTIS
TTAGWDSFLLPILNRPPDCDPVMDNPGTDTLGNCSDPVFGLLFFCSYITLCILLWVYMSI
SVILENFNVAVEETSDPLCEDDFEMFNKTWEKFDPEASQFISYNILSEFCDTLKHPLRIP
KPNTIKLICMDLPLVPGDKIHCLDILLALTKEVLGESGEMDTTKQRIEERFRANYSSKVS
YVPITTTLRRKQEEVASAVIQRAYRRHILRHKVKLASCKVNEKTELIKKVDALPEKKGLI
AIKISKAHGSQQSLEGDETIVNMGS
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atgccaacccgaatgataacactgctagaagcctggaagaggaacagagcctttccaagg
aagaaagctaaagacctgaaaatatgtcctcgtttgctcccactgctcagagacccgggt
gtggtggcatcactggccaagcagaatgccaagatggtcaccctgctacctcccacaggc
accccagtgttccgccaattcacccctgagtcgctgacggagatcgacaggcggattgaa
gaggaagcaaaggagcaggacaggaagttagctctgaacatcgaggtagcagaagaagac
ccgccgaagccatccgctgatctggaggccggaaaggccctgccatttatttatggagat
ccaccagctgagcttctcaacacacctctggaggaactggatccattctacaaatcacgc
aaaacctttattgtcatcaccaaggggaatacaatcttcaggttcaatgctgcaccggcc
tgctacatcctgtcgcccttcaatcttctaaggagaggagccatcaagattcttatacat
tcgttgtttagcatgttcatcaagttaacactcctggccaactgtatgttcatgacgatg
agtgaccttcctgaatggtataaaactgttgaatatgtcttcattgggatctataccttt
gaggcagccattaaagtcttctccagaggcttctgcgttgggcaatttgcattccttcga
gatccgtggaactggttggatttcatggtgataagcatggcgttcatcactgagtttttt
gacctgggcaacatatcggtcttcaagacgttcattgtggtccgaatccttaaaataatc
cctctagtttctggtcttaaaaacattgtgggttctctgatccagtcagtgaagaagctg
gctgatgcgatgttgataacttcgttctgcttggctgtgttcgccctggtcggactgcaa
atgttcatgggaaatctacagcagaagtgtgttagatttcctttaaataccacaatgtac
ataggcaatgacacatgggactacaatgagcacatcaacaatgaagtaaactactactac
ttcccagggatgaaggaccctctactttgtggaaattcttctgatgcaggagaatgtccg
tcaggatacacatgtataaaggctggtcgaaatcccaactatggatacacaaactatgac
agttttggatgggcctacctctccctgtttcaactcatgacaaaggatttctgggaaaat
cttctccagctgactcttcgctcggcagggaaaacctacatgatcttctttgtggtggtg
atcttcctgggttcgttctacctgatcaacctcatcctggctgtggtggccatggcgtat
gcagagcagaacgaggccactatggctgaggcaaaagagaaggaggcggagtatgccagg
atcatggagcaactgatggaacgaaaaaaggcggagtgttctgctgtgctgaggaggccc
agtgaagaccaagagagtaaagaacagatgaaagttgcaggccagcagaagaagacaccc
atttcacccagagtctacaaccaagatgacatggatgatatggaggtggatccgaggccc
tgctccccttgctggtacaagttttcagacatcttcttgaaatggaactgctgtgtgcct
tgggtgaccttcaagaggtggatgtacctcatagtgatggacccattcgtggacctgggc
atcacaatctgtatcattctcaacacaattttccttgccctagaacattacccaatgaca
gcagagtttgaggaggtcctgagctttgggaacttggttttcattgggatctacactgca
gagatggtgctgaaagtaattgccttggatccatattactacttccagagtgggtggaac
atcttggacagcatcattgtggccctgtgcttgattgagctgctgttggctgattttgag
ggtctgtctgtgctccgaaccttccgtctgatgcgtgttttcaagacttccatattctgg
cctgcattcaagaggatgctaaagatcaccagtaactccatgagggccctggggaatcac
accttgctcctggtcatcatcgtcattttcttttctatattgggcatgcaactgtttggg
aagagctatgcagatgaagtgtgtaagatctctgaagactgcacactgcctcggtggcac
atgcatgacttcttccatgctttcctcatcatcttccgggtgctgtgtggcgagtggatc
gagaccatgtgggactgcatggaggtggccggccagggcaggtgtctcatcttctacctg
atggtcatagtcattagtaacctagtgctgttgaacctcttcatggccttgctgctgagc
tccttcaggggggaaaacatggtggatctggagggggacagggagaggagcaacctgcac
attgcagtcaggaggatcaccaagggcatgaactggaccaaagtctacatcattaaacaa
ttccagattattgtcgggaagcagaagaaagaaaatggtgatcacgacgaacacggcttt
gataaggatgttaaagaccaaaccgagttaaagcagttagcggtggacaatggctcttca
atctgcatcacaggggtcaatcattctgaagtgatggaaaaggaggaagaggtagacccc
accagcctggagaactgctggaccgagaaatgcatcggtcgatgtccatgccttgacttt
gacatcaccacgggaaaaggaaagatttggtggaacttccggaaaacatgttttctcatt
gtggagcacagttacttcaagaccttcatccttttcatgattctgatgagtagtggagct
ctggtgtttgaagacatacactttgaacaacgcaggaccttgaaaatcatcctggaatat
gctgatcaagtcttcacctgtgtgtttgtttttgagatgctacttaagtgggcagcttat
gggttcaagacctacttcacaaatgcatggtgctggctggacttcctgattttggatgtg
tctttggtcaacttaatggcaaacatcttgggctactctgaccttcgaccattaagggca
tttcttcccctccgagccttgtccagatttgacggaataaaggttgtagtgaatgttctg
gtgggggccattccttccatctttagcgttttcctggtttgcctcattttctggctcatc
ttcagcatcattggagtcaatatgtttgctgggaaattctatcgctgcttcaacatgacc
tctgaggagaggtttccagctgacattgtaaataacaagactgaatgttttgaactaata
gcgcagaatgacaatgtgcgctggatgaacgccaaggtcaactatgacaacgtgggcatg
ggatacctttccctcctccaaattgtaacatttaaaggatggatgaacataatgtatgat
gctgtggattcacgaaggattgaagatcagcccatatatgaggataatcttttcatctac
aactactttgtcatattcatcttctttggggtcttcatcaacctgattctattcattggt
gtcttaattgacaactataatcaacagaaaaaaaagttaggaggtaaaaatatcttaatg
acagaggaacaaaataaaaactacaatgccatgaagaagctcaccaagaaaccacagaag
cctgtgcctagaccaacgaacaaaatcgcaggcctcattttcaacctgatctcccaacca
ttctttgacctcttcatcatggtgctgatctgcctgagcttggtgatgatgatggtggag
acggatgaccagagcctggaggcggaggaaatcctatattggatcaactttgggttcatc
atcatcttcattattgagtgtatcatcaagctgattggactacgacggttctatttctct
gatggattgaatattgtggattttcttgtcatcattctttctgttgttggtatttttctg
tcagaaatcatagagaaatattttttctcacctatcatattccgtgtgataagactggcc
aggattggtcgggttctgagactcacccgagctactaaaggcatccagtcgatgttgttt
gccctgaggatgtcacttcctgctgtcttcaacattggacagctgcttttccttatcatg
tttttcttctctattttgggaatgtttaactttgcctacgtgaaaagggaggctgggata
gacgatatgttcaattttgaaacttttggcaacagtatcatatgtcttttcacaatttca
acaacagccggttgggatagttttctcttacccattctaaacagacctccagactgtgac
ccagttatggataatcccggcacagatacgctaggaaactgcagcgatcctgtattcggc
ctactttttttctgcagctacatcacattatgtatcctgctttgggtctacatgtccatt
tctgttatcctcgagaacttcaatgtggccgtggaggaaaccagtgacccactttgtgag
gatgactttgagatgttcaacaagacctgggagaagttcgaccctgaagcttcacagttc
atctcctacaacattttgtcagagttctgtgacacgctgaaacacccgctcaggatcccc
aaaccaaacacaatcaagctgatctgcatggacctccccctggtccctggggataagatc
cactgtctggacattcttctggctttgactaaggaggtgctgggagagtcgggggagatg
gacaccacaaaacaaagaattgaggagaggttcagagccaactactcctctaaagtctca
tacgtgccaatcacaaccaccctgaggcgaaaacaggaagaggtagcttctgctgttatc
cagagagcgtatcgtaggcacatactgagacacaaagtgaaacttgcttcttgcaaggtc
aatgagaagaccgagttaatcaagaaggttgatgcactgccagaaaaaaagggcctgata
gccatcaagataagcaaagcgcatggaagccaacaatccttggaaggggatgaaactatt
gtcaatatgggttcttaa
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integrated database retrieval system
