Esox lucius (northern pike): 105023362
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Entry
105023362 CDS
T04894
Name
(RefSeq) sodium channel protein type 4 subunit alpha B
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
els04040
]
105023362
Ion channels [BR:
els04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105023362
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GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Zip
Motif
Other DBs
NCBI-GeneID:
105023362
NCBI-ProteinID:
XP_010890801
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All DBs
Position
LG11:complement(17029730..17081790)
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AA seq
1877 aa
AA seq
DB search
MANLLPPAGTQVFHRFTPESLAEIERRMAEEAKEQDRKLDLNIEVAEEDLPKPSADLEAG
KALPFIYGDPPAELLNTPLEELDPFYKSRKTFIVITKGNTIFRFNAEPACYILSPFNLLR
RGAIKILIHSLFSMFIMLTILSNCVFMTMSDPPAWSKTVEYVFTGIYTFEAGIKVLSRGF
CVGDFTFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVG
ALIQSVKKLADVMILTVFCLAVFALVGLQLFMGNLRQKCVYWPFNITYFHNITLDNRTWD
FNEYINDNENHYYLPGMIDPLLCGNASDAGLCPEGYKCFKAGKNPNFGYTSYDSFGWAYL
ALFRLMTQDFWENLFQLTLRSAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYAEQNKAT
MAEAKEKEAEYARIMEQLMERKETERLERHQEHHEHAKIAGSQTSLPSPKSENKEVEKSV
EMVAVDDESGFNMNDKALQDTNGGLMVRANSERVLTDQESVAVLRKARENKDQLEVADLQ
EKTPSLPSVYSQDDSNDLEVDLRPCPPCWYKFSDIFLKWNCCVPWVTFKKWMYLIVMDPF
VDLGITICIVLNTMFMAMEHYPMTAEFEDVLSVGNLVFTGIFTAEMVLKLIAMDPYYYFQ
VGWNIFDSIIVTMSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGA
LGNLTLVLAIIVFIFAVVGMQLFGKSYRECVCKISGDCTLPRWHMQDFFHAFLIIFRVLC
GEWIETMWDCMEVAGQGMCLIVFMMVMVIGNLVVLNLFLALLLSSFSGDNLAAPEEDGEM
NNLQIAINRITNAIDWAKVYIIKQFQIIVGKKSNGCGDEADGVVGGSNGNIDILQKDNPN
PNPNPNPNPNPNPTDDPTALELKMLDIWVDDVHPSGFLTTAELTVDVPIAKMESDNEDDN
EDDNDDDNDDGSEKDIKDHTELTQFVADNASSICSTVDNPSEVEEEEEEELDPTSPENCW
TDKCIGRCPCLDFDITTGKGKIWWNFRKTCFLIVEHNYFETFIIFMILMSSGALAFEDIY
IEQRRTIKIILEYADQVFTYVFIIEMLLKWAAYGFKTYFTNAWCWLDFLIVDVSLISLTA
NILGYSELGPIKSLRTLRALRPLRALSRFEGMKVVVNALVGAIPSIFNVLLVCLIFWLIF
SIMGVNLFAGKFYYCFNTTSEERFPADIVNNKTECLGLVAQTDTVRWMNAKVNYDNVGMG
YLSLLQIATFKGWMDIMYHAVDSRNVEDQPIYEDNVYMYIYFVIFIIFGSFFTLNLFIGV
IIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPVPKPANLIAGLIFDLISQQ
FFDIFIMVLICLNMVTMMVETDDQSKEKDEILYFINLVFIIIFTGECILKLIALRQYYFS
VGWNIFDFVVVILSIVGIMLADIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLF
ALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEAGIDDMFNFETFGNSIMCLFMIT
TSAGWDGLLSPILNSGPPDCDPDVENPGSDTRGNCGSPGLGICFFCSYIIMCFLVVVNMY
IAIILENFNVATEESGDPLCEDDFEMFYETWEKFDPDASQFISYDILSEFCDTLKDPLRI
PKPNTIKLISLDLPLVPGDKIHCLDILLALTTEVLGESGEMDTMKQSMEEKFMANNPSKV
SYEPITTTLRRKQEEVAATVIQRAYRKHLLMRAVKLASYKYCVKTQLIRKDQVPPETKGL
IAIKMNKLYGSQKSLGVDETVVDMDSYQKNQKTETQPSVQTAEEPNPVEIQSDIVLHSAP
YIIPASIRNSQLRESDV
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggccaacctgctacctcccgcaggcactcaagtgttccaccgcttcaccccagagtca
ctggcggagatcgagaggcggatggccgaggaagcaaaggagcaggacaggaagttagat
ctgaacatcgaggtagcagaagaagacctgccgaagccatccgctgatctggaggccgga
aaggccctgccatttatttatggagatccaccagctgagcttctcaacacacctctggag
gaactggatccattctacaaatcacgcaaaacctttattgtcatcaccaaggggaataca
atcttcaggttcaatgctgagccggcctgctacatcctgtcgcccttcaatcttctaagg
agaggagccatcaagattctcatacattcgttgtttagcatgttcatcatgttaacaatc
ctgtccaactgtgtgttcatgacgatgagtgaccctcccgcatggagtaaaactgttgaa
tatgtcttcactgggatctatacctttgaggcaggcattaaagtcttgtccagaggcttc
tgcgttggagattttacattccttcgagatccatggaactggctggatttcatggtgata
agcatggcgtacgtcactgagtttgttgacctgggcaatgtgtcggccctcaggacgttc
cgtgtgctccgagcccttaaaacaatcactgtaattcctggtcttaaaaccattgtgggg
gctcttatccagtcagtgaagaagttagctgacgtgatgatcctaacagttttctgcttg
gcggtgttcgccctggtcggactgcaattgttcatgggaaacctgaggcagaagtgtgtt
tactggcctttcaatattacatatttccataacatcacattggacaacaggacatgggac
ttcaatgagtacatcaacgacaacgaaaaccattactacctcccggggatgatagatcct
ctgctttgtggaaacgcttctgatgctggactatgccctgaaggatacaagtgtttcaag
gctggaaagaatcccaactttggatacacaagttatgacagttttggatgggcctacctt
gcactgtttcgactgatgacacaggatttctgggaaaatcttttccagttgactcttcgc
tcggcagggaaaacctacatgatcttctttgtggtggtgatcttcctgggttccttctac
ctgatcaacctcatcctggctgtggtggccatggcttatgcagagcagaacaaggccact
atggccgaggcaaaagagaaagaggcggaatatgccaggatcatggagcaactaatggaa
cgtaaagagacggagagacttgaaaggcatcaagaacaccatgaacatgctaagatcgct
ggcagccagacgtcactgcccagtccaaaatctgaaaataaggaagttgaaaagtctgtt
gaaatggttgctgttgatgatgagtccggtttcaacatgaatgacaaggctttacaagac
accaatggaggccttatggttagagccaactctgaaagggtcctaacagaccaggagtct
gtcgcggtgttgaggaaggccagagaaaacaaagatcagctggaagtagcagatctgcag
gagaagacacccagtttgcctagtgtctacagtcaagatgactcgaacgatctggaggtg
gatcttaggccctgccccccttgttggtacaagttttcagatatattcttgaaatggaac
tgctgtgtgccttgggtgaccttcaaaaagtggatgtacctcatagtgatggatccattc
gtggacttgggcatcacaatatgcattgttctcaacaccatgttcatggccatggaacat
tacccaatgacagcggagttcgaggatgtgctgagcgttgggaacttggttttcactgga
atcttcacagcagagatggtcctaaagctcattgccatggatccatattactacttccag
gttgggtggaacatcttcgacagcatcattgtaaccatgagcctggtggagctggggctg
gccaatgttcagggtctgtccgttctccgatccttccgtctgatgcgtgtattcaagctg
gcaaaatcctggcctacgctcaacatgctgatcaagatcattggtaactctgtgggggcc
ctggggaacctcaccctggtcctggctatcatcgtcttcatctttgctgtggtgggcatg
caactgtttgggaagagctacagagaatgcgtgtgtaagatctctggagactgcacactg
cctcggtggcacatgcaagacttcttccatgctttcctcatcatcttccgggtgctgtgc
ggcgagtggatcgagaccatgtgggactgcatggaggtggccggccagggcatgtgtctt
attgtattcatgatggtcatggtcattggtaacctagtggtgctgaacctcttccttgcc
ttgctgctgagctcgttcagtggggacaatttggcggctccggaggaggatggagagatg
aacaacctgcagattgccattaataggatcacaaatgccattgactgggccaaagtctac
atcattaaacagttccagattattgtcgggaagaagtcaaacggatgtggtgatgaggct
gatggtgttgtgggtggaagtaatgggaacatagacatcctccagaaggacaaccctaac
cctaaccctaaccccaaccctaaccccaaccctaaccccactgacgacccaacagctttg
gagctgaaaatgctggacatttgggtggacgatgtacacccaagtggatttcttacaact
gctgaattgacagtagatgtacccattgccaaaatggagtcggataatgaagatgataat
gaggatgataatgatgatgataacgatgatggctcagaaaaggatattaaagaccatact
gagttaacacagtttgtagcggacaatgcctcttcaatctgcagcacagtggacaatcct
tctgaagtggaggaagaggaggaggaagagttagaccccaccagccctgagaactgctgg
actgacaaatgcatcggtcgatgtccatgccttgactttgacatcacaacgggcaaagga
aagatttggtggaacttccggaaaacatgttttctcattgtggagcacaactacttcgag
accttcatcattttcatgattctgatgagtagtggagctctggcttttgaagacatatac
attgagcagcgcaggaccattaaaatcatcctagaatatgctgatcaagttttcacctat
gtgtttattattgagatgctacttaagtgggcggcttatgggttcaagacctacttcaca
aatgcatggtgctggctggacttcctgattgtggatgtgtctttgatcagcttaacggca
aacatcctgggctactctgaacttggaccaatcaaatctcttcgaacattaagggcatta
cggcccctcagagcgttgtccagatttgaggggatgaaggttgtagtgaacgctctggtg
ggggccattccttccatctttaacgtgctcctggtttgcctcatcttctggctcatcttc
agcatcatgggagtcaacctgtttgctgggaaattctattactgcttcaacaccacatct
gaggagaggtttccagctgacattgtaaataacaagactgaatgtttgggactagtggca
cagactgacactgtgcgctggatgaacgccaaggtcaactatgacaacgtgggcatgggc
tacctttccctcctgcaaatagcaacatttaaaggatggatggacataatgtaccatgct
gtggattcacgtaatgtggaagatcagcccatatatgaagacaatgtttacatgtacatc
tacttcgtcatattcatcatctttggttccttcttcaccttaaatctattcattggtgtc
attatcgacaactttaaccaacagaaaaagaagtttggaggtaaagatatcttcatgacg
gaggaacaaaagaaatactacaatgccatgaagaagcttggttccaaaaagccacagaaa
cctgttcctaaacccgcgaacttaatcgcgggcctcattttcgacctgatctcccaacaa
ttctttgacatcttcatcatggtgctgatctgcctcaacatggtgacaatgatggtggag
acggatgaccagagcaaggagaaggatgaaatcctctatttcatcaaccttgtgttcatc
atcatcttcaccggagagtgtatcctcaagctgattgcgctgcgacagtactacttctcc
gtcggttggaatatttttgattttgtcgtcgtcattctttctatcgttggtataatgctg
gcagacatcatagagaaatattttgtttcacccacacttttccgtgtgataagactggcc
aggattggtcgggttctgagactcatccgaggcgctaaaggcatccgaacattgttgttt
gcgctgatgatgtcacttcctgctctcttcaacattggactcctgcttttcctcatcatg
tttatcttctcaatttttggaatgtccaactttgcatatgtcaaaaaggaggctgggatt
gatgatatgttcaattttgaaacttttggcaacagtatcatgtgtcttttcatgatcaca
acatctgccggttgggacggtcttctctcacccattctgaatagtggacctccagactgt
gacccagacgtggaaaatcctggctcagatacacgaggcaactgcggcagtccgggattg
ggcatttgttttttctgcagctacatcatcatgtgtttcctggttgtggttaacatgtac
attgctatcatccttgagaacttcaatgtggccacagaggagagtggtgacccactgtgt
gaggatgactttgagatgttctacgagacctgggagaagttcgaccctgacgcatcacaa
ttcatctcctatgacattttgtcagagttctgtgacacgctgaaagatccgctcagaatc
cccaaaccaaacacaatcaagctgatctccttggacctccccctggtccctggggataag
atccactgtctggacatccttctggctttgactacagaagtgctgggagagtcgggagag
atggacaccatgaaacaaagcatggaggagaagttcatggccaacaacccctctaaagtc
tcatacgagccaatcacaaccaccctgaggcgaaaacaggaagaggtagcagctactgtt
atccagagagcgtatcgtaagcacctactgatgcgtgcagttaaacttgcttcctacaag
tactgcgttaagacacagttaatcaggaaggaccaagtgccgccagagacaaagggattg
attgccatcaaaatgaacaaactttatggaagccaaaaatccttgggagtggatgaaaca
gttgtagatatggattcttatcaaaaaaaccaaaagacagagacacaaccttctgtgcag
actgctgaggagccgaatcctgtggagattcagagtgatattgttttgcactccgctcct
tacatcatccctgcctccatccgtaattctcagctgagggagtccgatgtttga
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