Esox lucius (northern pike): 105024273
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Entry
105024273 CDS
T04894
Symbol
arhgef1
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
els
Esox lucius (northern pike)
Pathway
els04270
Vascular smooth muscle contraction
els04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
105024273 (arhgef1)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
105024273 (arhgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105024273 (arhgef1)
Membrane trafficking [BR:
els04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
105024273 (arhgef1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
Motif
Other DBs
NCBI-GeneID:
105024273
NCBI-ProteinID:
XP_012994870
UniProt:
A0A3P8YU66
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All DBs
Position
LG20:20797582..20837841
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AA seq
1060 aa
AA seq
DB search
MSIIGAEDEEFENDLDPTVDDNSSHFASIDLVKGRPTHLLVFLNHVILQFDCSPLLCFLH
ADLFRNLSTKETKKQFVEFYNSFLDKGAILRVQVPQIVSYELDRSRPDLLTEEQQRKFVH
EIQKAQFPEVLRQLEDFRRKRMMGMTPNEAELVEVETHHHTDRIPMEMKEKAVAETLLDK
MSDIHPSVVAEEEKCSAIFAAVVFYMKHLGVKSRVADSKKSRGFLRRPFGKNRKTEESTK
SPKQRGGFPNILTAAGGWIAGSTEVKLPKVEAEVEKEKLSLERKGSSIPAPARSSIAPDI
APPAINKKSGSVSHQGSEVCDASVNISSSPDSSLSDTGLISSRSDPQSVSEGAEVSPVGQ
AMGPSIWEPTSPAEPPLEENVEKDRRKPRRVGRSESARVDRHSSRRRGSSRAKQSRSRSD
VDLQAATATAADSSPTSPNPSVDGGMLVPEASLLGPFPSGPTIQQEEQDPRFLELEQEPP
NWREHAPPETLKDLSKKETKRQEVINELFATEHAHVRMLSVLLTVFWKPLEKAELMDTTE
LSTIFPSLDEIIELHYAFYENLKKLRQDTFIVKTIGTTLLNRFEGTEGEWFQKLTSRFCS
HQTWALELLKSRQKKDPRFHAFIQEAESRPQCRRLQLKDIIPTEMQRLTKYPLLLENIAK
CTEDSWEKEKIQRSAECCRKILNHVNEEVKQMENLLTLKDYQRKLDTSGLKPSNELYLEY
KNFDLTQQKMIYEGTLTWRVTKEKTLDVQCVLLRDLLVLLQKQDDKMVLKCQSKSNIAAQ
EGKQMLSPIIKLDSAFLREVATDRKAFYVIFTWDSGAQIYELVAQSVGERKTWTDVIKTA
VDELKKTGAPALDLKRGNSIIPGGGGYSPTLFQPPLSPTENGGDSLKHGTDPDKDSLTDE
MKSVDSRHSLIDYLSDKGFDLRGHSNSDAEKVANCALDEVMSLKRLLVGSISLSEDSLHD
KENGGGEPDLRDQDTDGSTDQGAGRDGVVEGHEGGEGRGMKIEEAGISAPLVLSQERMEE
VRVKLHGLEEKLKRLQSVEENHHRLQVALSKFSLEGGHFQ
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcattggggctgaggatgaggaattcgagaatgatctggaccctacggtggat
gacaactccagccacttcgccagtatagacctagtgaagggaagacccacccacctcctg
gtcttcctcaaccacgtcatcctgcagttcgactgctcccccctgctgtgctttcttcat
gctgacctcttcaggaatctcagtaccaaagagaccaagaagcagtttgtggagttctac
aatagcttcctggacaagggcgctattctcagggtgcaagtcccccagattgtatcctat
gaattggaccgttccagaccggacctgctcactgaagagcagcagaggaagtttgtccat
gaaatccaaaaggctcagttcccagaggtgctgcgacagctggaggacttcaggaggaag
aggatgatgggtatgacccctaatgaggcagagctggtggaggtggagactcaccaccat
actgaccgcatccccatggagatgaaggagaaagctgtggcagagactctgctagataag
atgtctgacatccatccatcggttgttgcagaggaggagaaatgttcggctatttttgca
gcagtggtcttctatatgaagcacctgggagtaaagtccagagtagctgacagcaagaag
tccagaggattcttgaggagaccctttgggaagaatagaaagacagaggagtctactaaa
tcacccaaacagaggggggggtttcccaacatcctcaccgccgctggtggctggattgct
ggcagcactgaggtcaaactgcctaaagtggaggctgaagtggagaaggagaaattatct
ctggagcggaagggttccagcatccccgcccccgctcgatcctcaatcgcccctgacatc
gcccctccggcaataaacaagaagtctggttctgtctctcatcaggggtcagaggtctgt
gatgcctcagtcaacatcagctccagtccagactcctccctcagtgacaccggtttgatc
agcagccgttcagaccctcagtcagtgtcggagggggccgaagtctcccccgtgggacag
gctatgggcccatccatctgggagcccacctctcccgcagagccccctctagaggaaaat
gtagagaaagacagacgcaagccaaggcgtgtggggcgcagtgagagtgctcgcgtggac
aggcattcttctcgtcgtcgtggctcttcccgggccaaacagtcacgttcccgtagcgac
gtggacctgcaagccgccaccgccacggcagcagactcctccccaacctcccctaacccc
tctgttgacggagggatgttggtccctgaggcgtccctcctgggccctttcccctctggc
cctaccatccagcaggaggagcaggaccctcgtttcctggagctggagcaggaaccccca
aactggagagaacacgcccccccagagacactcaaagacctcagcaagaaggagacgaag
agacaggaggtcatcaatgagctgtttgcgacagagcatgcccatgtgcgtatgctgagt
gttctgctgaccgtgttctggaagcctctggagaaggcagagctcatggacaccaccgag
ctgtccacaatcttccccagcctggatgagatcatagaactgcactatgccttctatgag
aacctgaagaagctgcggcaggacaccttcatcgtcaagaccattggaaccacgctactc
aacagatttgaaggaacggagggtgagtggtttcagaagctgacatccaggttctgtagt
caccaaacgtgggccctggaactgttgaagagtagacaaaagaaggatcctcgctttcac
gccttcatacaggaggcagagagcaggcctcagtgtcgtaggctgcagttaaaggacatc
atccccactgagatgcagagacttaccaaatacccactcctgctggagaacatcgccaag
tgcacagaggacagctgggagaaggagaaaatccagcggagtgctgagtgctgcaggaag
attctcaaccatgtcaacgaggaggtcaaacagatggagaacctgctgaccttgaaagac
tatcagcgcaagctggacacctcaggcctgaagcccagtaatgagctgtacttggaatac
aagaactttgatctgacccagcaaaagatgatctatgaagggacactgacttggagagtg
accaaggagaaaactctagacgtccagtgtgtgttgctgagggacctgttggtgctctta
cagaagcaagatgataagatggtgctgaagtgtcaaagtaagagtaacatcgcagcgcag
gaaggcaagcagatgcttagccccatcatcaaactggactctgctttcctccgtgaggta
gcgacagaccgtaaagctttctacgtgatcttcacctgggacagcggggctcagatctat
gagctggtggctcagtctgtcggggagagaaagacctggacagatgtgataaagacagcg
gtggatgagctgaagaagactggcgctcctgctctggacctgaagagaggcaacagcatc
atacctggaggaggagggtacagccccaccctgtttcaaccccctctcagccccactgaa
aacggcggagattcgttgaaacatggcactgatccagataaggacagcctgaccgatgag
atgaagtctgtagactctcgtcattccttaatagattatctctcggacaaaggctttgac
ctgaggggtcacagcaacagcgatgcggaaaaggtggcaaattgtgctttagatgaagtc
atgtccttgaagaggctattggttggcagcatcagcctatcggaggactcactccatgat
aaggagaatggagggggggagccagatttgcgggaccaagacactgatggctcaaccgac
caaggcgccggcagggatggagtagtggaagggcatgagggaggagagggccgagggatg
aagattgaggaggcagggatcagtgctcccctggttctgtcacaggagaggatggaggag
gtgcgcgtgaaactacacggactggaggagaagctgaagagactgcagagtgttgaggag
aaccaccacaggctgcaggtggccctgtcaaagttctccctggagggaggccacttccaa
tga
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integrated database retrieval system
