Esox lucius (northern pike): 105024486
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Entry
105024486 CDS
T04894
Name
(RefSeq) nuclear pore membrane glycoprotein 210 isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
els
Esox lucius (northern pike)
Pathway
els03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105024486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105024486
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105024486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_2nd
Ig_NUP210_1st
Ig_NUP210_15th
Ig_NUP210_4th
Ig_NUP210_3rd
Ig_NUP210_7th
Ig_NUP210_9th
Ig_NUP210_6th
Big_2
NUP210_Ig
Motif
Other DBs
NCBI-GeneID:
105024486
NCBI-ProteinID:
XP_028971736
LinkDB
All DBs
Position
LG20:17586269..17618626
Genome browser
AA seq
1881 aa
AA seq
DB search
MALLNVKVLCKLFIFILTIIAWSQSTRLNVPKLLLPSSNHNHINFTLTAEKGCYKWMSSR
PQTVSVRPLSLSMPPSTLSPSTCSQQALVSALPGSALLETSRVAIIQGEDSVTGHILRCD
VIIDQIKQIQIVTTTRQLFTEDPPLELVIMALDSGGNTFSSLAGLQFEWKLAKDSETAES
VRFVRFSEAGYSPLHHILSLEEAGQMGDRVLLEGVRSGATWVRVSLAHPEYEWLKPASVS
LVVTDRLYLSPSHDTYLLLGSALSYGVWRQVHNKQMRVALGEGQYQLSVENHLDGEEPDD
VITVDQDTGTVTAIGLGRTTLSVTHPGLTKDFTSHLPRCSVIVVEPSYLTLGVEEEKDRW
VLESDRQYQVTIRVHDQEGHTAHLAKNVVMTIELSDWLFNVLESSTNSSYHVVETLGTGR
TTVRAALFSVLTEDGIALPLIPPIRAEQEVEIYAPLTLWPCIFVFPWQPEGPLYQHHMKV
EGGSGVVTWSVSDSDVAVVTVKGEVIAGKRRGFVKIQASDTRNPLHTASGQVFVLRPDRV
ELLPKRRDCRVGESITLPLAIWGVQEEENQGLPQGSSGPQTLLEMTDCSLITLHISTEPL
GVFTPLPGSVGPGPGFCGGLLLEAVGQGHTLVSITMETEHHKITSMLRLVAYSPLKALVS
DVVLSLGASRLVVFEGGPQPWSHAPGRFHSEGRAEGKGLTVEAVSLSEPGRAQQHTFRVT
CHTLGENWLVFRCGNSPGSLNQEPGEAVEESRVRVDCSTPATLSLSLLPSTSSPLSIPPS
HLSHPCPQPHYPSSLWSLSCSRNSLLQLAVFDHRGVQFDNFSSCSVNWLSSNSSLLSLST
HMGLVDTQTSSRHSKLHGRQVLHAHDHTGTVTITVALTAAQELWVTPLTASLNLKLVEDV
QWDKRAITLYNHPDVTEKLTLVQGSGHFLVRVQDRELINITYLENSSVVQMSPLRCGLTS
VRAYDLCATPPDPAVTSISVSDIADFQIDFVDIVELGHSALVRVRVVDCYRQPFLHHYLR
LMQLKLNPSSPIVTVDPVGSLDSVSVGYRVSGQIVGVVSLHLSAVDSSGSVRTSAHKQLQ
VYPRFTLQPPSLALALGSVRQVKWEGGPHPQSSVGFSVSDNRIATVTDTGLVRGVGVGLV
KLRGALQTVTQDTGALLTFAQDEVEAEVFNLTGVRIQAPLVRLSVGSEMPVHVMGSDASQ
NPLALGSVEAGISFQWSLGKLGVLEIHPRHSQAGVTVSPAHSFSVLVRACAVGQTSLRVT
VQQANHTSSTHQQLSDEIRVVVYQEMRLSVGTSRSILMSPYSQYELQSNKDTISPVRYAL
CQCVKGEGLVTVDSQGVLRAGPDTGSALLEVVAMENCGLNQTLLISVRVSPVWFVRLFTM
SSLYSAGGGGLPAFPLGWTIRVMTLCYDSLGQLFNAHNTQTRITTNRDDLIQVTPDSDSH
SFVVQTVSAGLTVLGVQGDPTNPSLSDYTPLPVLSAISAPPHSLRPGDTLCFSSHLTGPH
GQPGQWNVSSTDVLQIDSKTGAALAKHSGKVVVSYRLEGGQQALREVTVESPAIPKVSIP
DDRFLTNWPDAPNYTVSVELDTSPINTAQCSLSQREAIEKLKPETELLCLLHFIAPYLQL
NTLQTIFITTPHYDLDSGEYSCRISVSPQSTSVLHLLSSLSLSISLSASLRGQSEVPMFP
LTGHRVQLPYLPAFHCPVSSLVLSVRHPKAEFSVLGTKDLLSTLEVHSDSTAVQTSERVQ
SDGHRVFSVTMTSWVKGQALLPPANITLYSRLTPQTEVVTVFVRADTAVEIDLIGRQSSW
TQLLHIQSILVFAVFAVVAVTAALFIVYKSNMQRGPVVSQYPITHNTVDHSMALHFSPWI
RPSSSATERTLRRRSWLWSLP
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atggcccttttaaacgttaaagtattatgtaagctatttatttttattttaacgattatt
gcttggagtcagtcaacaagactcaatgttcctaagttacttttgcccagctcaaatcat
aatcatatcaacttcacgttgaccgcggagaagggatgctataaatggatgtcctctcga
cctcagacagtcagtgttcggcccctttctttgtccatgccaccctccaccttgtctcca
tccacctgtagtcagcaggccctggtgtccgccctacctgggtctgctcttctggaaact
agccgagtggccatcatacagggtgaagactctgtgaccggccacatcctgcgctgtgat
gtcatcattgaccaaatcaagcagattcagattgtcacaacaactcgtcaattgtttact
gaggacccgccccttgaactagtcatcatggccctggactcaggaggcaacacattcagc
agtttggcaggtctgcagtttgagtggaagctagcaaaggactcggagacagcagagagt
gttaggtttgttcgtttctcggaggcaggctactccccgctgcatcacatcctgtcccta
gaggaagcgggtcagatgggggacagggtgttactggagggtgttcgtagtggagcaaca
tgggtcagggtctcgctcgcacatccagagtacgagtggctaaagccagcctctgtgagc
ctggtggtgacagacagactttacctcagcccctcccatgacacatacctactgttaggc
tccgccctgtcctatggagtatggagacaggtgcacaacaaacagatgagggtggcgctg
ggtgagggacagtatcagctgtcagtggagaaccacttggacggagaagagccagacgat
gtcatcacagtggaccaggacactgggactgtcaccgccattggactgggccgcaccacg
ttgtccgtcacacacccaggcctcaccaaggacttcacatcccatctgccccgctgctct
gtgattgtggtagagcccagctacctgacgctaggtgtagaagaggagaaggacaggtgg
gtgttggagagtgatcgtcagtaccaggtgaccattcgagttcatgaccaggagggacac
acagcacatcttgcaaagaatgtggtgatgaccattgagctctctgattggctgttcaat
gtcttggagtcctctactaacagttcctaccatgtagtggaaacactgggaactggccgc
actactgtacgagctgccctgttcagcgttctcactgaggatggcattgccttacctctg
attccaccaatcagagcagagcaggaagtggagatctatgcgcccctcaccctgtggccc
tgtatcttcgtgtttccctggcaacctgagggaccactctatcagcaccacatgaaggtt
gagggtggcagtggagttgtgacctggtcggtgagtgacagtgatgttgccgtagtgacc
gtcaaaggggaggtgatagcaggaaagaggcgtggctttgtgaagattcaggcatcagac
acacgcaaccctctccacactgcttctggacaggtgtttgttttgaggccagaccgtgtg
gaacttttacccaaaagacgtgactgtagggtgggggagagcatcaccctacccctggct
atttggggggtccaggaggaggagaaccaggggcttccccaggggagctctggtcctcag
accctgctggagatgacagactgctctctcatcaccctccacatctctactgaaccactg
ggtgtcttcacccctctaccagggtctgtgggtccaggcccagggttttgtggaggactg
ctgctggaagccgtgggccaaggccacacccttgtcagcatcaccatggaaacagaacac
cacaaaatcacttccatgttaaggctcgttgcctatagtcccctgaaggccttggtgtca
gatgtggtcttgtctctgggtgcttcccgtcttgttgtctttgaagggggtccgcagccc
tggtcccatgctcccggacgtttccatagtgagggccgtgctgaggggaaggggctgact
gtggaggctgttagcctatcagaacccgggagagcccagcagcacaccttcagggtcacc
tgccacaccctgggggagaattggttggtgttcaggtgtgggaactctccaggctctctg
aaccaggagcctggagaggcagtggaggagagcagagtgagagttgactgcagcacccca
gccactctgtctctttcactacttccttccacctcctctcctctctcaatccctccatcc
cacctgtctcacccatgccctcagccccactacccttccagtctgtggtctttgtcctgt
agcagaaattcgttacttcagttagcagtgtttgaccaccggggggtgcagtttgacaac
ttcagctcctgctcggttaactggttgtcttccaactcctccctgctatccctgtccaca
cacatgggcctagtggacactcagacatccagcagacacagcaaactacacggtcgtcag
gtactccacgcccatgatcacacagggactgtcaccatcactgtggcccttacagctgca
caagagttatgggtcacaccactgactgcctctctgaatctgaaactggtggaggacgta
cagtgggacaaacgtgctataaccctctataaccaccctgatgtcactgagaagctaacg
ttagttcagggttcgggacacttcttggtccgtgttcaggatagggagctgatcaacatc
acttacctggaaaacagcagtgttgtacagatgtctcccttgcggtgtggcctcacttct
gtccgagcatatgacctgtgtgcgacccctcctgaccccgccgtgacctccatctcagtt
tctgacatcgctgacttccagatagactttgttgacattgtggagctgggccacagtgcc
ttggtgagagtgcgtgttgtggactgctacagacagcccttcctgcatcactacctccgt
ctgatgcagctcaagctcaatccctcctcccccatcgtcacagtggatcctgtaggttca
ttggacagcgtctccgtaggttaccgtgtgtcaggtcagatagtgggagtggtcagtctt
cacctctctgcagtggacagcagtgggagtgtccggacctctgctcacaaacagctacag
gtctaccccaggttcaccctgcagccgccaagtctggccctggcactgggcagcgtgcga
caggtaaagtgggagggtggcccccacccccagtccagtgtgggcttctctgtgagtgac
aaccgcattgccacagtaaccgacacaggattggtccgtggagttggtgtgggtttggtc
aaactcagaggggcgctgcaaactgtcactcaggacactggagcattgctcaccttcgca
caggatgaagtggaggcggaagtgttcaacctgacaggggtcaggatccaggcccccctg
gtcagactgtctgtaggctctgagatgccagtgcatgtgatgggcagtgacgccagccag
aaccccttggctctgggcagtgtggaggctggtatctccttccagtggagcctgggcaag
cttggagtcctagagatacatcccagacacagccaggcgggcgtgacggtctctcctgcc
catagtttttctgtgctggtgagggcgtgtgctgtgggacagactagcttgagagtgacg
gttcagcaggccaatcacacatcatccacccaccagcagctctctgatgagatacgggta
gtggtctaccaggagatgcggctgagcgtgggaacctccagatccatcctcatgtctccc
tactcacagtacgaactacagagcaacaaagacaccatttcccctgtgaggtacgctctg
tgtcagtgtgttaaaggggagggcctcgtaactgtggacagccagggagttctgagggcg
gggccagacacaggatccgccctcttagaggtggtggctatggagaattgtgggttaaac
cagaccctgctcatcagtgtccgggtgtctccggtgtggtttgtcaggctgttcaccatg
tccagcctctacagcgcaggagggggaggcctgcctgcctttcctttggggtggaccatc
cgagtcatgactctctgctacgacagtctggggcagctgtttaacgcccacaacacacaa
acacgtatcaccaccaacagggatgacttgatacaggtaactccagactcagacagtcat
tcctttgtggtccagacggtgtctgctggtctgaccgtcctcggggtgcagggtgacccc
accaacccctccctgagcgactacacacccctccctgttctttccgccatttctgccccc
ccacactcactaaggcccggagacacactgtgttttagcagccacctcacagggccgcat
ggccagccaggtcagtggaacgtgtcctctactgatgtgctgcagattgactcaaaaaca
ggagctgccttggcaaagcattctgggaaggtggtggtttcctacagattggaaggagga
caacaggccctcagagaggtgacggtggagtctcctgccatcccaaaagtctctattcct
gatgatcgtttcctcaccaactggcctgacgcacctaactacactgtctctgtggagcta
gacacctcccccattaacacagcccagtgtagcttgtcccagagggaggccatagagaag
ctgaagccagagacagagttgctgtgtttactgcacttcatcgccccctacctccagctc
aacacactgcagaccatatttatcaccacacctcactatgacctggacagtggtgaatac
agctgcagaatctctgtgtctccccagtccacctctgtcctgcatctcctctcctccctc
tctctctccatctctctgtctgcatctctgaggggccagtctgaagtccctatgttccct
ctcaccggtcatcgggtccagttgccatacctgcctgcgttccactgcccagtgtcttcc
ctggttctctctgtccggcatcccaaggcagagttctctgtgctgggcaccaaggatttg
ctgtctaccctagaggtccactctgacagtactgcagttcagacatctgagcgcgtccaa
tcagatggacatcgagtgttttctgtcaccatgacatcatgggtcaaaggccaggccttg
ctccctcctgccaacatcaccctgtacagccgcctgaccccacagacggaagtcgtcaca
gtgttcgtcagagcagacactgcggtggagatagatttgattggtcgccagtcctcctgg
actcagctccttcacatccagtccatcctagtctttgctgtgtttgcagttgtggccgtt
acagctgccttattcatagtgtacaaatccaacatgcagagaggccctgtggtcagccag
tacccaatcacacacaacacagtggaccacagcatggcgctgcatttctccccatggatc
agaccctcgtcttcggccacagaacggaccctccgcagacggagctggctctggagccta
ccataa
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