Esox lucius (northern pike): 105025839
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Entry
105025839 CDS
T04894
Name
(RefSeq) platelet-derived growth factor receptor beta-like isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
els
Esox lucius (northern pike)
Pathway
els04010
MAPK signaling pathway
els04020
Calcium signaling pathway
els04510
Focal adhesion
els04540
Gap junction
els04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105025839
04020 Calcium signaling pathway
105025839
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105025839
04540 Gap junction
105025839
09142 Cell motility
04810 Regulation of actin cytoskeleton
105025839
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
els01001
]
105025839
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
els04090
]
105025839
Enzymes [BR:
els01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
105025839
Protein kinases [BR:
els01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
105025839
CD molecules [BR:
els04090
]
Proteins
105025839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
Ig_6
Adeno_E3_CR1
RIFIN
C2-set_2
VEGFR-1-like_Ig-like
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
105025839
NCBI-ProteinID:
XP_010895133
UniProt:
A0A3P8YJY2
LinkDB
All DBs
Position
LG04:12137352..12163171
Genome browser
AA seq
1081 aa
AA seq
DB search
MTSVQLTVLLTAILHLYPKFQCLEIKPNNTEVIMKPGNTIGFNCYGQGTVKWTFKRDDNV
PNFRNETKAMTSVLFLDDVTWKHTGVYVCTETQTNETQEVAVFVSDPDVWFVESSHGMTT
RTSEVGTIPCVVTNPQIAVSLHERDSDMKVHGYYIPHEGYRALLEDRTYVCRGELNGEVK
ESQSFNVLSIIVPEALDPYINASKTVLKQGESLTVTCTVHGVDLVSFFWTYPNQDMEHVK
PTTDVLPQSMRSYLWFATATLANAGQYVCLVLDVVQDQTATANVNITVLERGFVELSPVQ
QGKVSVKLYQNVELRVEIEAYPAPHVYWTKDNTSIKGDKTIITKQEHVTRYVSTLTLVRI
RAEQKGLYTILVTNGDDTKEVTFDLEVKVPAQITDLSDHHLPGHRHAVTCVAEGVPFPSI
NWFSCDSMLKCSNRSTVWQPLVSDSETLSLQTNVSFNESRKVGQVRSQVTFHKPQQATIR
CEASNEGGIRWRDVKLVSSTLFSQVAVLAAILALVVIIIISVIILIAVWRKKPRYEIRWK
VIESVSLDGHEYIYVDPIHLPYDLAWEMPRDSLVLGRTLGSGAFGRVVEATVYGLGHSQS
CMKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKQGPLYLVTEYCRYG
DLVDYLHRNKHTFLEYYAEKNQEDSGCRISGGSTPLSQRKGYVSFGSECDGGYMDMSKDE
PTMYVPMQELKDTIKYADIQPSPYESPYQHDLYQEEDQTTVSALVISDSTTLSYTDLIGF
SYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDDNYISKGSTFLP
LKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYSALKRGYRMSKP
NHATDEVYEVMQKCWDEKYEKRPEFSLLVHTMGNMLTDSYKKRYSQVNDEFFKSDHPAVV
RTKPRLSSPFPTPVFTPSTTPATPQDTNPYPLTGDFRAEADSQEIVPSYNDYIIPIPDPK
PEEEVCSESPASSLTTDEEADSISPETAEAGTVSEEEDLHANQALVPLESSGTPEVEDSF
L
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtgttcaactgacggtccttcttacagctattctgcacctctaccctaagttc
caatgcttggagatcaaacctaacaacacagaggtcattatgaaaccgggcaacaccatt
ggcttcaactgttacggacagggcacagtcaaatggacatttaaacgggatgacaatgtt
ccaaattttagaaatgaaaccaaagccatgaccagtgttctctttctggatgatgtcacg
tggaaacacacaggagtgtatgtctgtaccgagacacagaccaacgagactcaagaggtg
gccgtgtttgtgtcagacccagatgtgtggtttgttgagagctcccacggcatgacgacc
cggaccagtgaagtgggcaccataccctgcgtggtcaccaatccccagatcgctgtcagc
ctccatgagagggacagtgacatgaaggtccacgggtactacatcccccacgagggctac
agggccctgctggaggacaggacctacgtgtgccgcggggagctcaacggggaggtgaaa
gagtcccagtcattcaacgtcctcagtattattgtcccggaggcgctcgacccctacatc
aacgcgtcgaagacggtgctgaagcagggcgagtccctgacggtgacctgcacggtgcat
ggagtggatctggtctccttcttctggacctatcccaaccaagatatggagcacgttaag
ccgaccactgacgtcctgccacagagcatgcgctcctacctctggttcgccacggctaca
ctggccaatgctgggcagtatgtgtgtctggtattggatgtcgtccaggaccagacagcc
acagccaacgtcaacatcactgttctcgagcgaggcttcgtggagctgagtccggtccag
cagggcaaagtctcggtcaagctataccagaatgtagagctgagggtggagattgaggcc
taccctgctccacatgtttactggacaaaagacaacaccagcatcaaaggggacaaaact
atcatcacaaagcaggagcacgtgaccaggtatgtcagtactttgactttggtgaggatc
agggcggaacagaagggcctttataccattcttgtcaccaatggagatgacaccaaggaa
gttacctttgatttggaggtcaaagttcccgctcagatcactgacctatcggaccaccac
ctcccaggacacaggcatgctgtgacctgtgtagctgaaggggtccccttcccatccatc
aattggttcagctgtgacagcatgctcaagtgcagtaaccggagcacagtgtggcagccc
ctggtgtcagactctgagaccttgagcctccagaccaacgtcagcttcaacgagagccgc
aaggtcggccaggtccgaagccaggtcaccttccacaagccccagcaggcgaccattcgc
tgtgaagccagcaatgagggaggaatccgctggagggacgtcaaactggtgtctagcact
ctgttctctcaggtggcggtgttggcagcgattctagccctggtcgtcatcatcatcatc
tccgtcatcatcctcattgctgtgtggaggaagaagccgcgttatgagatcaggtggaag
gtcatagagtctgtgagtctggacggccacgaatacatctatgtcgaccccatccacctg
ccctatgacctggcttgggagatgcccagggacagcctggtgctgggtcgaacccttggg
tctggagcgtttggcagggtggtcgaggcgactgtgtatggtcttggccattcccagtcc
tgcatgaaagttgccgtgaaaatgctcaaatccacagcaaggagaagtgagactcaggcc
cttatgtcagagctgaagattatgagtcacctcgggcctcacctgaacatcgttaacctg
ctgggagcatgtaccaaacagggtcctctctacctagtgactgagtactgtcgctacgga
gacctggtggactacttgcacaggaacaagcatacgtttctggagtactacgctgagaag
aaccaggaagactccggctgtcgcatctctggagggagcacccctctcagccagaggaaa
ggctacgtgtcgtttggcagtgagtgtgacggcggttatatggacatgagtaaggatgag
cccaccatgtacgtccccatgcaagagctgaaagacaccatcaaatatgccgacatccag
ccgtctccctacgagtctccataccagcacgacctataccaggaagaagaccagaccaca
gtctcagccctggtcattagtgactccaccaccctcagctatactgacctcatcggtttc
agctaccaggtggccaaaggcatggagttccttgcatccaagaactgtgtccatcgtgat
ctggccgccagaaacgtgttgatctgtgagggtaaactggttaagatctgtgactttggc
ctagccagagacattatgcacgatgacaactacatctccaaaggcagcacgttcctgccg
ctgaagtggatggccccggagagtatcttccataacctgtacactaccttgagtgatgtt
tggtcctatggcatactgctctgggagatcttcaccctgggaggaacgccttaccctgac
ctgcctatgaatgagttgttctacagcgccttaaagagaggctatcgcatgagcaaacct
aatcatgccacagatgaagtctatgaagtcatgcagaagtgctgggatgagaagtatgag
aagagaccagagttctcccttctggtccacactatggggaacatgctcacagacagctat
aaaaagagatatagccaggtcaacgacgagttctttaaaagtgaccacccagccgtggtc
cgcaccaaacccaggctctcctctcccttccccaccccggtctttaccccctccacaacc
ccagccaccccccaagacacaaacccctatcctctcaccggagacttcagagcggaggca
gacagccaagaaattgtgccgtcctacaacgactacataatcccaatcccggacccaaaa
ccagaggaggaagtctgttctgaaagccccgcgagctctctgactacggacgaggaggct
gattcaatctccccagagactgcagaggcaggcaccgtttcagaggaggaggatctccat
gccaaccaggcgctggttcctctggaatcatctggaacaccagaagtggaggatagcttc
ctgtag
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