Esox lucius (northern pike): 105028557
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Entry
105028557 CDS
T04894
Symbol
kdm2a
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
els
Esox lucius (northern pike)
Pathway
els03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105028557 (kdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105028557 (kdm2a)
04121 Ubiquitin system [BR:
els04121
]
105028557 (kdm2a)
03036 Chromosome and associated proteins [BR:
els03036
]
105028557 (kdm2a)
Enzymes [BR:
els01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
105028557 (kdm2a)
Transcription factors [BR:
els03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
105028557 (kdm2a)
Ubiquitin system [BR:
els04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105028557 (kdm2a)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
105028557 (kdm2a)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
105028557 (kdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
JHD
F-box-like
JmjC
F-box
Cupin_8
Motif
Other DBs
NCBI-GeneID:
105028557
NCBI-ProteinID:
XP_028975123
UniProt:
A0A6Q2Y5P0
LinkDB
All DBs
Position
LG04:complement(4325054..4335217)
Genome browser
AA seq
1345 aa
AA seq
DB search
MGDQKQRYSNRLRTGTRRRYQDDGISDDEIEGKRTFDLDEKLQSNRFNSDLVKRMEGKDF
TFEYIQREGLRDPLIFETKDGLGLEMPDSDFSVSDVKLFVGSRRIVDVMDVTTQKGMEMS
MAQWRRYYETPPSERDKLYNVISLEFSHTKLENLVKRPTSVDMIDWVDNMWPRHLKERQR
DSTNSIIDMQYPKVQKYCLMSVQGCFTDFHVDFGGTSVWYHILRGGKVFWLIPPTPQNLE
LYENWVLSGKQGDIFLGDKATDCQRIELKQGYTFMIPSGWIHAVYTPEDTLVFGGNFLHS
FNIPMQLNIYNIEDRTRVPAKFRYPFYYEMCWYVLERYLYCLTNTSHLTPEFQKHSLGIG
LTRKDREKKLNGNLRNGSSEEVKVDEVGEGDDELKEKGEVPVKAEESEEECPVAAKPGLR
VSLTPLELEGLWNLLGKLEELPAHKKCVPAGIRNAPALLHDIRALLREHSNDDPQMSYTG
KPIVKWPQRPSWYQPPSPPPSVVYRPRLGTPHKSAVPRPVRPASSISALRRRRVRCKLCA
ACQRKECGECNFCKDMRRFGGPGRMKKGCVMRQCLAPGLPNSAVCALCGEGQEKQESADA
SPDSTTLMECSNCAQITHPDCIKVPGEGRINKDLPSCWECPKCYQGNEGSSSESLTSDED
TMAATPSPMSMSSKRAHREGIGVGEAGGGMRTGRRGRPPLTSSLSQRRAPPPSQRLLLQQ
QQNRKRAGALELRLRKRIKLERSKILTSKQVLSLDRSPKHLGSRSQGLLQRGVSSRLHSP
VGRLSRGRGSFRGSPYRSSPGTRLQTHQPSLSLAPAGRGEGRRERGRGRGVRFRGGGGGS
GRGRGGQRQRAEEDDTDSSSSSSSSSSSDEEEEAERRESSARGGRRDKENRPQRRGRAAA
KEEEEESAESNQNGEEEEEMEDDGGEGGHAHVEPPVLVVSDLGDDLMKGSYLTVTLQPSR
AKRDPGAIVPKLEAAVAPRPAPPGQSYAQNRNLARPPLRNHAPDAGPSRPDRHVHPRSSG
PAATRRGRRDEMRPGEPGRTNNGASSSISSAALVPSPRLPLSALQDGEREVAKGGGEPGC
EREVWVSVFRYLTRAELCVCMAVCKNWYKWSLDKRLWMRIDLSVSKAISPQALSGIIKRQ
PLTLDLSWTSISKKQLSWLIHRLPALKDLMLSGCSWSSISALSSPSCPLLRTLDLRWADG
VKDGQIRDLLNPPGCNNHSHLRNMQSFRLSGLDISDSTLRLVIRHMPLLTRLDLSHCPGV
TDQSVNLLTAVGSSTRNTLAELNLAGCCKLTDACLWYLRRLSCLSLLDLRECKGVSRKAC
EAFISELSVNTLYCLSEDKLIQRIS
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaccaaaagcaacgttacagcaatcgcttgcgtactgggacacggaggcgttat
caggatgacgggatctcggacgatgagatcgaagggaagaggaccttcgacttggatgag
aagctgcagagcaacaggttcaactccgacctggttaaacgcatggagggaaaagacttt
acgtttgagtacatccaaagggaggggctgagggacccgctcatctttgaaacgaaagat
ggtcttggcttagagatgccagactctgatttcagtgtgagtgatgttaagctgtttgta
ggcagcaggcggatcgttgacgtgatggacgtgacgacacagaaaggcatggagatgtcc
atggcccagtggagacgttactatgagacccctccctcagagcgggacaagctctacaac
gtcatcagcctggagttcagccacaccaagctggagaacctggtgaaacgccccacctca
gtggacatgatcgactgggtggacaacatgtggccccggcacctgaaggagaggcagaga
gactccaccaactccattatagacatgcagtatcccaaagtgcagaagtactgtctgatg
agtgtccagggctgcttcacggacttccacgttgactttggcggtacatcagtctggtat
cacatcctccgaggtggcaaggtgttctggcttatcccacccacgccccagaacctggag
ctgtatgagaactgggtgttgtcagggaaacaaggggacatcttcctgggagacaaggcc
acggattgtcagaggatagaactgaagcagggctacacctttatgatcccctctgggtgg
atccatgcggtctacacccctgaggacacacttgtgtttgggggaaacttcctccacagc
ttcaatatccccatgcagcttaacatctacaacattgaagaccgcactcgagtccccgct
aagtttcgatatccgttctactatgagatgtgctggtatgtgctggagagatacctctac
tgcctaacgaacacctcccacctcaccccagagttccagaagcactcgctcgggattgga
ctgacccgtaaagaccgagagaagaaactcaacggcaacttgcgaaacggttcatcggag
gaggtcaaagtggacgaggtgggcgagggagacgacgagcttaaagagaaaggcgaggta
ccggtcaaagccgaagagtcggaggaagagtgtcccgtcgcagccaagccggggttgagg
gtgagcctcactccgctggagctggaggggctgtggaacctccttgggaagctggaggag
cttccagcccacaagaagtgtgtccccgcgggcatccgcaacgcccctgccctgctccac
gacatacgggccctcttgcgggagcacagcaacgacgacccccagatgtcctacactggg
aagcccatcgtcaagtggccccagaggccctcgtggtaccagcccccctcgccccctccc
tcggtggtgtaccggccgcgcctgggcactccccacaagagcgcggtccctcgacccgtc
aggccggcctcctccatctcggcgctgaggaggcgacgggtacgctgtaagctctgcgcg
gcgtgccagaggaaggagtgtggggagtgcaacttctgcaaggacatgaggaggttcgga
ggcccggggcgcatgaagaagggctgtgtcatgcgccagtgtctcgctcctggccttccc
aactcagcggtctgtgctctgtgcggagagggccaggagaaacaggagtccgcggacgcc
agccctgactccacaacactcatggagtgctccaactgtgctcagatcacccaccccgac
tgcatcaaggtacctggggagggccggatcaataaggaccttcccagctgctgggagtgt
cccaaatgttaccagggcaacgaaggctcctcgtcagagtcgttaaccagtgacgaggac
accatggccgccacgccctctcctatgtccatgtcgtcgaagcgtgcccaccgcgagggc
atcggagtaggggaggccggaggtgggatgaggacgggtcgacgtggcaggccccccctg
acgtcctccctgtcccagcggagagcgccccctccctctcagcggctgctactgcagcaa
cagcagaacaggaagcgagccggagccctggagcttcggctgagaaagaggataaaactg
gagcgcagcaaaatcttaacatcgaaacaggtgttgtccctggaccggtctcctaagcat
ttaggctcccgaagtcagggcctcctccagaggggtgtgtcctctcgcctccactctccc
gtcggcagactgtctcggggccgcggctccttccgaggctccccctaccgctcctctccc
gggacgcgcctccagacccaccaacccagcctcagcctggcccccgccggcaggggagag
ggacgcagggagcgggggagggggagaggagttcgcttcagaggaggaggaggaggttct
ggcagaggaagaggagggcagagacaaagagcggaggaggacgacactgacagcagcagc
agcagcagcagcagctccagtagtgacgaggaggaggaggcagagaggagagagagcagc
gcgaggggaggaagacgggacaaagaaaacaggccacagagacgaggaagagcagcagcc
aaagaggaggaagaggagagtgcggagtccaaccaaaacggagaagaggaagaggagatg
gaggacgacgggggcgaaggaggtcatgctcacgtggagccgccggtccttgtggtgtcg
gacctcggcgacgacctaatgaagggctcatatctcacggtgaccctccagccatcgagg
gccaagcgtgacccgggcgccatcgtccccaaactggaggctgcggttgcgccccgcccg
gccccccccggccagagttatgcccagaaccggaacctggccaggccacccctcaggaac
cacgcccccgacgccgggccgtcgcgcccggacaggcacgtgcacccccggagcagtggc
cccgcggcgacgcgcagaggccggcgagacgagatgaggcccggcgaacccgggagaaca
aacaatggtgcttcctcctccatctcctccgctgccctggttccttcaccgcgcctccct
ctgtctgccttacaggatggggagagggaggtagccaaaggggggggtgagccaggctgt
gagagggaggtgtgggtgtccgtcttccgttacctgactcgagccgagctctgtgtctgc
atggccgtctgcaagaactggtacaaatggagtctggacaagaggctctggatgcgtatc
gatctgagcgtgtctaaagccatcagtccccaggccctgtcgggcatcatcaaacgccag
ccgttgacccttgacctctcgtggacgtccatctctaagaaacaactctcctggctcatc
caccgcctgccagcgctgaaggacctcatgttgtctggctgttcctggtcttccatttcg
gctctgagctcacccagttgccccctcctgcgcaccctggacctgcggtgggccgacggg
gtgaaggacggacagatccgggacctgctcaaccccccgggctgcaataaccacagccat
ttaaggaacatgcagtctttccggctgtcggggctagacatcagcgactccaccctgagg
ctggtgatccggcacatgcccctgctgacccgactggacctgtcccactgcccaggcgtc
acggaccagtctgtcaacctcctcaccgccgtgggctcctccacacgcaacacgctcgcc
gagctcaacctggcaggctgctgtaagctgacggacgcgtgtctctggtacctccgtcgg
ctatcctgcctctcgctgctcgacctgcgggaatgcaagggcgtgtcccgcaaagcgtgt
gaggccttcatctccgagctgtccgtcaacaccctctactgcctatcggaggacaagctg
atccagcggatatcctag
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integrated database retrieval system
