Elizabethkingia sp. JS20170427COW: FGE20_05405
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Entry
FGE20_05405 CDS
T06442
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
elt
Elizabethkingia sp. JS20170427COW
Pathway
elt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
elt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FGE20_05405 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elt03400
]
FGE20_05405 (nth)
Enzymes [BR:
elt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FGE20_05405 (nth)
DNA repair and recombination proteins [BR:
elt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FGE20_05405 (nth)
Prokaryotic type
FGE20_05405 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
DUF3349
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
QCX53201
UniProt:
A0A5B7UDD1
LinkDB
All DBs
Position
1197060..1197695
Genome browser
AA seq
211 aa
AA seq
DB search
MTKKQRAVLVIQELEKLYPEVAIPLDHFDPYTLLVAVALSAQTTDKKVNEVTPILFSHAK
TPFEMRKLEVEEIKDLIKEIGLSNTKAKNLKAMAEMLVEKHNGVVPQSFEELEELPGVGH
KTASVVMAQAFNIPAFPVDTHIHRLMTQWKLSEGKNVKQVEKDAKKLFPKDKWNKLHIQI
ILYGREYSPARGKGEKDFLTKMLFEKPIKRA
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaagcaaagggctgtattggtgattcaagagttggaaaaactatatcctgag
gttgctattccgctagatcattttgatccttatactttattggtagccgttgctttatcg
gcacaaacgaccgataaaaaagtaaatgaggtaactcccattcttttttctcatgcaaaa
actccttttgagatgagaaaattagaggtggaagaaattaaagatcttattaaagagata
ggtctttccaatactaaagctaaaaacctaaaagcaatggcggaaatgctagtggaaaaa
cataatggagtagtccctcaatcatttgaggagctagaagaattgccaggggttggacat
aaaaccgcttctgtagtaatggcacaggcttttaatattcctgcctttcctgtagatacc
catatccatcggttgatgacacaatggaaactgtcggaaggtaaaaatgtaaaacaagtg
gaaaaggatgcaaaaaaactttttcctaaggataaatggaataagttgcacatccagatt
attctgtatggaagagaatattcccccgcaagaggaaaaggagaaaaagattttttaaca
aaaatgttatttgaaaaacctataaaaagagcctaa
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