Candidatus Enterovibrio altilux: BTN50_0070
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Entry
BTN50_0070 CDS
T09803
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
elux
Candidatus Enterovibrio altilux
Pathway
elux03030
DNA replication
elux03410
Base excision repair
elux03420
Nucleotide excision repair
elux03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
elux00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BTN50_0070
03410 Base excision repair
BTN50_0070
03420 Nucleotide excision repair
BTN50_0070
03430 Mismatch repair
BTN50_0070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
elux03032
]
BTN50_0070
03400 DNA repair and recombination proteins [BR:
elux03400
]
BTN50_0070
Enzymes [BR:
elux01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BTN50_0070
DNA replication proteins [BR:
elux03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BTN50_0070
DNA repair and recombination proteins [BR:
elux03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BTN50_0070
NER (nucleotide excision repair)
GGR (global genome repair) factors
BTN50_0070
MMR (mismatch excision repair)
DNA ligase
BTN50_0070
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BTN50_0070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
DZR_2
Motif
Other DBs
NCBI-ProteinID:
ATF08614
UniProt:
A0A291B6I6
LinkDB
All DBs
Position
1:64667..66679
Genome browser
AA seq
670 aa
AA seq
DB search
MTTNIQQQLQKLKAQLNYHGHLYYVENKSELPDAEYDQLMQQLRAIEADHPENISADSPS
QRVGGRSLNAFMQVHHEIPMLSLDNAFDDTDLLAFEKRIKERLNRADDFTFSCEPKLDGL
AVSLMYEKGVLVRAATRGDGTTGENITNNARTIKNVPLQLQGTDWPVQLEVRGEVLMLKE
GFNKLNEKNLKKGKKIFVNSRNAAAGSIRQLDPKITATRPLRFYAYSLGLISEVVDDSHF
GRLKQLHQWGIPLSSEVKKVKGLSNVIAYYQNMIALRNTLPYEIDGVVIKVDAIATQKQL
GFIARAPRWAIAYKFPAQEKITIVLDVEFQVGRTGAITPVAKLAPIVIGGVTISNATLHN
ADKIVRLDIKIGDTVIIRRAGDVIPQIVCVVKSRRPDYAKKIVFPTECPVCHSHVKRIEG
EAVTRCSGRLICLAQRKETIKHFFSRKALNVNGLGDKIIKQLIDKELVKEPADLFKLSAE
QIAMLKRMGPRSAQKIMLSIKKAKKTTLARFIYSLGIREVGETMAATLAHSFVTLKVLRT
ASEKQLVSVHNVGAVIAKHVTSFFGEEKNKNAINALLEVGIHWHEIKLRDKSKSLLLDGK
VVVLTGSLSQMTRSDAKAALQAFGAKITGSVSTKTDLLIAGEAAGSKLAKAQTLGIEILN
ENEMIKLFLN
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaccactaacattcaacaacaattgcagaaactgaaagctcaactgaactatcatggc
catctttactatgtagaaaataaatctgagcttcctgatgctgagtatgatcaattgatg
cagcagttgcgggcaatagaagcagatcatcctgaaaatatttctgctgattcgccaagc
cagcgtgttggtggccgatcattaaatgcgtttatgcaagtgcaccacgaaattccgatg
ctgtctcttgataatgcgtttgatgacacagacctactggcgttcgaaaaacggatcaaa
gagagattgaatcgtgcagacgattttacatttagttgtgaaccgaaactggatggacta
gcggttagtttaatgtatgaaaaaggtgtgcttgttcgagcagcaacacgtggtgatggt
accacaggagaaaatattactaacaatgcgcgcacgattaaaaatgtacccttacagtta
caaggcactgattggccagtacagttagaagtacgtggtgaagtacttatgttaaaagag
ggcttcaataagctgaacgaaaaaaatttaaaaaaaggtaaaaaaatttttgttaactca
cgaaatgcggcagcaggcagcattcgtcaactagaccctaaaataacggctacgcgccca
ctacgcttttatgcctactctcttggtcttatatcagaagtagttgacgattcacatttt
ggccgtttaaagcagttacatcaatggggaataccactgagctctgaagtaaaaaaagtg
aagggattgagtaatgtaattgcttactaccaaaacatgatagcgctccgtaatacactt
ccatacgaaattgatggtgttgtcattaaagttgatgctattgctactcaaaaacaacta
ggttttattgcaagagctccacgttgggctattgcctataaattccctgcacaagaaaaa
atcacaattgtattggacgtggagttccaagttggtagaacaggtgctattacacctgtc
gcaaagttggccccaattgttattggtggtgttaccatttccaacgcaacgctgcacaat
gccgataaaatagtgcgtttagacattaaaattggtgatacggtgattattcgtcgtgct
ggagatgtgattcctcaaattgtatgtgttgtaaaaagtcgtcggcctgattatgccaaa
aaaattgtgtttcctacggaatgtcctgtttgtcattcgcatgttaaacgtattgaaggt
gaagctgtgacacgttgttctggaagactcatttgtttggcgcaacgcaaagaaactatt
aaacattttttttcgcgtaaagccttaaacgtaaatggtcttggtgataaaattattaag
cagttgattgataaagaattagttaaagagccagcagaccttttcaagctgtcagcagag
caaattgcgatgcttaagcgtatgggacctagatctgcacaaaagatcatgctttctatc
aagaaagcaaaaaaaaccacactcgctcgctttatttattcactgggtatccgagaggtg
ggtgaaacaatggcagcgacccttgcgcattctttcgttactttaaaagtgcttcgtact
gcttcagaaaaacaattggttagcgtgcataatgtaggtgccgttatcgcaaaacatgtg
acatctttctttggcgaagaaaaaaataaaaacgccattaatgcattgcttgaagttggt
attcattggcatgaaattaaacttcgtgataaaagcaaatcattattgcttgatggtaag
gttgtagttcttacaggttctttgtcacaaatgactcgtagtgatgcaaaagcagcatta
caagcctttggcgcgaaaatcactggtagcgtgtctacaaaaactgatttacttatcgca
ggtgaggctgcggggtcgaaattagctaaagcacaaacattaggcatcgaaattttaaat
gaaaatgagatgattaaactatttttaaattaa
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