Escherichia coli W: ECW_m2985
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Entry
ECW_m2985 CDS
T02002
Symbol
ygcF
Name
(GenBank) conserved protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
elw
Escherichia coli W
Pathway
elw00790
Folate biosynthesis
elw01100
Metabolic pathways
Module
elw_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
elw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
ECW_m2985 (ygcF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
elw03016
]
ECW_m2985 (ygcF)
Enzymes [BR:
elw01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
ECW_m2985 (ygcF)
Transfer RNA biogenesis [BR:
elw03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
ECW_m2985 (ygcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ADT76385
UniProt:
E0J240
LinkDB
All DBs
Position
complement(3057985..3058656)
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AA seq
223 aa
AA seq
DB search
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAK
TKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETS
GTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTD
DKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacccgattaacgagatgttccagaccctgcaaggtgagggttactttaccggc
gtccccgccatttttattcgtttacagggatgcccggttggctgtgcctggtgcgacacc
aaacacacctgggaaaagcttgaggatcgggaagtctcccttttcagcattctggcgaag
accaaagagagtgataagtggggggcggcgagcagtgaagatttgctggctgtcattggt
cggcagggatataccgcgcggcatgtggtgattacgggtggtgagccttgcattcatgat
ttgctgccactgactgacctgctcgaaaaaaacggttttagctgccagatcgaaaccagt
ggaactcatgaagtacgctgcacaccgaatacctgggttaccgtatcaccaaagctgaac
atgcgcggcggctatgaagtgttgtcacaggcactggagcgagccaacgaaatcaagcat
ccagtggggcgcgtacgtgatattgaagcactggatgaactactggcaacgctgaccgat
gataaaccgcgagtcattgcactgcagccgattagccaaaaggatgatgccacacgtttg
tgcattgaaacctgcattgcgcgtaattggcgtttgtcgatgcaaacacataaatatcta
aatattgcctga
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