Epinephelus lanceolatus (giant grouper): 117245819
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Entry
117245819 CDS
T07331
Symbol
trpc5a
Name
(RefSeq) short transient receptor potential channel 5a
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ely01009
]
117245819 (trpc5a)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ely04040
]
117245819 (trpc5a)
Protein phosphatases and associated proteins [BR:
ely01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117245819 (trpc5a)
Ion channels [BR:
ely04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117245819 (trpc5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_5
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
117245819
NCBI-ProteinID:
XP_033465255
LinkDB
All DBs
Position
20:complement(33253668..33485616)
Genome browser
AA seq
1090 aa
AA seq
DB search
MNPMTQLYYKKATYSPYRDRIPLQIVRAEVELSAEERAYLTAVEKGDYAGVKHALREAEV
YYNMDVNCLDPLGRSALLIAIENENLEIMELLLDHGIHTGDALLYAIRKEVVGAVELLLS
HRRPSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKRFAKDLLDQARSSRELETILNHRDNDQSEELDPRQCHDLAKLKLAIKY
HQKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFIIGLLFPVFSLIYLLAPKSSL
GRFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTIVEWMILPWVLGFIW
AEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASEEPNNCKGIRCERQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIIPSPKSILYLLVWLHNKLCRRGQPPGDDTHKCENLREFTERHADSLIQNQHYQ
EVIRNLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRRPPRRNYSSS
SETAKDDGAVASEDDSESGDGGGGQRSKGVTFMTPLEDDATPSPTLGVSALVRSISGMTR
IEGGGEGEEEELEEGIGWGEEEEEEEGKPKSNGLKTTVIPPSSTTVLPSPSSSFSSTFSS
SLARTRSRLQRLSTPGTKADSFKRLSYLFSRSKRKAPPMPLPLQSPPSYTISDGLLRPLG
THSHSDFGLSDVTRSETHLNEVGRSVDINNPSFSPRRTNGRDSLLTLPLPPPCPCQSLHC
ASNMSESSSRLLDSSEDVFQGGGVGGAGEGGVDGGGGRGGVMMIGGWVGPCDDVIEDSCE
VIEDSVTTQL
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatgacacagttgtactacaagaaggcgacatactcgccgtaccgcgaccgc
atcccgcttcagatcgtccgggctgaggtggagctgtctgcagaggagagggcctacctc
accgccgtggagaaaggtgactatgcgggtgtcaaacatgccctccgggaggcggaggtc
tactacaacatggacgtaaactgcctggacccgctgggccgcagcgcgctcctcatcgcc
atcgagaacgagaacctggagatcatggagctcctgcttgaccacggcatccacacgggc
gacgccttgctctacgccatcaggaaggaggtcgtgggcgccgtggagctgctgctgtca
cacaggaggcccagcggcgagaaacaggttccctcactgatgatggacagtcagttttca
gagttcaccccggacataactcccatcatgcttgctgctcacaccaacaactacgagatc
atcaagctcctcgtccagcggaaggtcaccattcccagaccacaccagatacgatgtgac
tgtgtcgagtgtgtatccagttcagaggtcgacagtcttcggcattcaaggtctcgactc
aacatctacaaggctctggcctcaccctccctcatcgctctgtccagtgaagatcccatc
ctcactgccttcagactgggctgggaactcaaagagctcagcaaggtggagaatgagttt
cgtcaggaatacgaggagctgtcgcagcagtgcaagcggttcgccaaagaccttctggac
caggccaggagttctagagagctggaaaccatcctgaaccacagagacaacgaccagagc
gaggaactggaccccaggcagtgccacgacctggccaagctcaaactggccatcaaatac
caccaaaaagagtttgtggctcagcccaactgccagcagctgctggcaacgctgtggtac
gacggcttcccgggctggaggagacgacactgggccgtcaaactggtcacctgcttcatc
atcggactcctgtttcctgttttctcactgatctacctgttggctccaaagagctctctg
ggacgcttcatcaagaagcctttcatcaaattcatctgtcacacggcgtcctacctgact
ttcctcttcctcctgctgctggcctcgcagcacatcgcccgcaccaacctgcacatgcag
ggacctccacccaccatcgtcgagtggatgatcctcccatgggtgctggggttcatctgg
gcggagattaaggagatgtgggacgggggattcacagagtacatccatgactggtggaac
ctgatggactttgccatgaactctctctacctggccaccatatcactgaagatcgtggcc
tacgttaagtataactcctctcgtcccagggaggagtgggagatgtggcaccccacgctg
atagccgaggctctgttcgccatcgccaacatcttcagctcgctcagactcatctccctc
ttcaccgccaactctcacctcgggcccctgcagatctcactggggaggatgctgctggac
atcctcaagttcctcttcatttactgtctggtcctgctggcgttcgccaacggtctgaac
cagctgtatttctactatgagacaaaggcctcagaggaacccaacaactgcaagggcatc
cgctgtgagaggcagaacaacgccttctcaacgttattcgagactctccagtctctgttc
tggtcgatattcgggctgctgaacctgtacgtcaccaacgtgaaggcccggcacgagttc
accgagttcgtcggggcgaccatgttcgggacgtacaacgtcatctcgctggttgttctg
ctcaacatgctcatcgccatgatgaacaactcctaccagctcatcgctgaccacgccgac
atcgagtggaagtttgcccgcaccaagctgtggatgagttactttgacgagggcggcacg
ctgccgcctccgttcaacatcatccccagccccaagtccatcctgtacctgctcgtgtgg
ctccacaacaagctgtgcaggagaggccagccacccggggacgacacgcacaaatgtgaa
aacctccgagagttcaccgaacgccacgctgacagtctgatacagaatcagcattaccag
gaagtgatccggaacctggtgaagaggtacgtggcggccatgatacgcagcgccaagacg
gacgagggactgacggaggagaactttaaggagttgaagcaggacatctccagtttccgc
tacgaggtcctggatctcctcggcaaccggcgtcctccccggcgaaattactcctcctca
agtgagacagcaaaagacgatggcgccgtggcctcagaggatgacagcgaatcaggtgac
ggcggcggaggccagaggtcaaagggcgtgaccttcatgaccccgttggaggacgacgcg
acgccgtcaccaacgcttggtgtgtccgccttggtgcgctccatttctgggatgacccga
atagaaggagggggagagggtgaggaggaggagctggaggagggcattggatggggggaa
gaggaggaggaagaggaggggaaaccaaagagcaacgggctgaagacgaccgtcatccct
ccatcctccaccaccgtcctcccctccccgtcttcgtcattctcctcaaccttctcctca
tcattagctcgcacaaggagccgcctgcagcgcctctccactccaggaacaaaggcggac
tctttcaagcgcctctcctacctgttctcacgctccaaacgcaaagccccacccatgcct
ctccccctccagtccccaccctcatacaccatctccgatgggttgctccgccccctggga
acccacagccactccgatttcggactcagtgacgtgaccagaagcgagactcacctgaac
gaggtgggccgctcagtcgacatcaataacccctcgttctccccgcggagaacaaatggg
cgggactccctcctgacgctgcccctccctcccccatgcccctgccaatccctgcactgt
gcttccaacatgtccgagtccagctcgcgcctcctggactccagcgaggacgttttccag
ggcggaggcgtgggtggagcgggcgagggcggcgtggatggaggagggggaagaggaggg
gtgatgatgattggcgggtgggtgggaccctgcgatgatgtcatagaggacagctgtgag
gtcatagaggactctgtcaccacgcagctatag
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