Epinephelus lanceolatus (giant grouper): 117247071
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Entry
117247071 CDS
T07331
Symbol
irf3
Name
(RefSeq) interferon regulatory factor 3 isoform X1
KO
K05411
interferon regulatory factor 3
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04620
Toll-like receptor signaling pathway
ely04621
NOD-like receptor signaling pathway
ely04622
RIG-I-like receptor signaling pathway
ely04623
Cytosolic DNA-sensing pathway
ely05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117247071 (irf3)
04621 NOD-like receptor signaling pathway
117247071 (irf3)
04622 RIG-I-like receptor signaling pathway
117247071 (irf3)
04623 Cytosolic DNA-sensing pathway
117247071 (irf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117247071 (irf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117247071 (irf3)
04131 Membrane trafficking [BR:
ely04131
]
117247071 (irf3)
Transcription factors [BR:
ely03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117247071 (irf3)
Membrane trafficking [BR:
ely04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
117247071 (irf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
117247071
NCBI-ProteinID:
XP_033467108
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All DBs
Position
21:18543206..18551827
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AA seq
459 aa
AA seq
DB search
MSHSKPLLIPWLRTQIDSKRYPGVQWTNLEQTEFSIPWKHALRQDSSDMDILIFKAWAEG
SGNGRVHGDPSVWKRNFRSALRAKGFKLVSDNKNDPANPHKVFRWPDEPTSGANSSAGSQ
DQDDPDLFEDYGFPIQESQVVPCFDVYLQAADSPAGQDILQECLKGLNIGPEPEGTAGFE
PPPEQQQLQNPVVIGGHALPGQQQYPVMSEGAVGEAGLPEQPAHPMEGAVGGACDGQLVE
QFLHTITKTSDRDNFKTQFRITVYYRGVKVSEQLVQNEDGIRLVYRPDLIGPVVDHESGL
TLVSLPSPGAMLDQTQANLTQRILDKLDGLDVGVSGHVVYGLRRGGETKAFWSFSKFDRN
KQPQEISKLQPQPLYQFKDFVRGILDFIDGRDCPPCSLFFCLGEKWPDPDNRPWEKKLIM
VEVVLTSMEVLKDMAVGGGASSLQSVELQMSLEEMMEMY
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtctcattctaaaccactgctcatcccttggctgcggacccagattgacagcaaaagg
tatcctggtgtccagtggacaaacctggagcaaaccgagttctccatcccgtggaaacat
gctttaagacaggactcctctgacatggacatcctcatctttaaggcctgggcagagggg
agtggcaatgggcgggttcatggggacccctcggtgtggaagaggaacttccgcagcgcc
ctccgagccaaaggcttcaaactggtcagcgacaacaagaacgaccctgctaacccccat
aaagtgtttcgctggccggatgagccaacgtcaggagctaactcctctgctggatcccag
gaccaagatgaccctgatttgtttgaggattatggctttcctatacaagaaagccaggtc
gtcccatgctttgatgtctatcttcaagccgcagactcccctgccggccaggatattctc
caggagtgtttaaagggactgaacattggccctgaaccggagggcaccgcaggctttgag
cctcctcctgagcaacaacagctccaaaacccggttgtgattggtggacatgcgttgcct
gggcaacagcagtatccagtaatgtctgagggtgcagtcggtgaagctgggttgcctgag
caaccggcacatccaatggaaggagccgtgggaggggcctgtgatgggcagttggtggag
cagtttcttcatactattaccaagaccagtgatagagataatttcaagactcaattcagg
ataacagtgtactacagaggggtgaaggtgtccgagcagctggttcagaatgaagatgga
attcgcctcgtctacaggcctgacctcattgggccggttgtggatcacgagtcaggcctc
accctggtctctctgccaagtccgggagccatgctggatcaaacccaagccaatctgacc
caacgcatcctggacaagctggatggtttagacgtgggggtgtcgggccacgtggtctac
ggactgcgacgagggggggaaaccaaagcattctggagcttctccaagtttgacaggaac
aagcagccccaagagatttctaaactgcagcctcagccactgtaccagttcaaggacttt
gtgcgaggaatattggacttcattgatgggagagactgccctccgtgctccctgttcttc
tgcctcggggagaagtggcctgacccagacaacaggccttgggagaagaaactcatcatg
gtggaggtggtcctgacttcaatggaggtactgaaggacatggctgtaggaggtggcgcc
tcctccctgcagtctgtggagctgcagatgtctctcgaggagatgatggagatgtactga
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