Epinephelus lanceolatus (giant grouper): 117247176
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Entry
117247176 CDS
T07331
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ely04040
]
117247176 (scn4aa)
Ion channels [BR:
ely04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
117247176 (scn4aa)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
GPHH
IQ
PKD_channel
EF-hand_1
DUF1492
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
117247176
NCBI-ProteinID:
XP_033467385
LinkDB
All DBs
Position
21:32056146..32097420
Genome browser
AA seq
1915 aa
AA seq
DB search
MAPLLPPPGTDMFRRFTQESLAEIERLKEERKKPAEVEGHVERKKATEEEGHEEEEPTAP
NADLEAGKSLPLIFGDPPPELLNTPLEDLDPFYKAQSTFIVITKGNTIYRFNAEPACYIL
SPFSVIRRGAIRILIHSLFSMFIMITILSNCVFMTMSNPPAWSKTVEYVFTGIYTFEATV
KVLSRGFCVGSFTFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIP
GLKTIVAALIQSVKKMVDVMILTVFALAVFALVGLQLFMGNLRHKCVRWPIDTNETAFEF
FNTTTTLNDTLSFNNTMGVNETAYSNSTFNFIEYIENTDNHYFLDGSPDALICGNSSDAG
KCPEGYTCMKAGRNPNFGYTSFDSFGWAFLALFRLMTQDYWENLFQLILRAAGKTYMLFF
VVIIFLGSFYLINLILAVVAMAYDEQNQATQREAIEKEEEFQRLLEQLKNQEQQAHALGS
RLTLTSKSLSHHTMSEMTDDESSPNNDENIKDCNGRIIPRLLVRAPTMVKPTTEYELSEK
SIGSSVHSMLHLEEPGLTQKSVSALTVLTAAAMEELEEAQRPCPPGWYKFADIFLKWDCC
PQWVLFKKWVHFVVMDPFVDLAITICIVLNTLFMAMEHYPMTPQFDHMLSVGNLVFTGIF
TAEMFFKLIAMDPYYYFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAK
SWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKISTECELPR
WHMNDFFHSFLIVFRILCGEWIETMWDCMEVAGAGMCLVVFLMVMVIGNLVVLNLFLALL
LSSFSGDNLSAGDDDGEMNNLQIAIGRITRGIDWFKAFAMRIVLQILGRKPKEPEEPERG
PTDDEDPKAEEIEMNHLDTGQNFKMADGIPNCLVEGRPSGFIVDGELSLNVPIAQGESDF
ENLGEDEEDDGDNANDSETSDEKKNKHFSENLEEEHSTLGNVKLMGALTDGDSSVCSTVD
YQPPEPEPEEEEEEEPEPEEPEACFTDDCVRRWPCLTVDITEGKGKKWWNLRRTCFTIVE
HDWFETFIIFMILLSSGALAFEDIHIERRRTIKIILEYADKVFTYVFIIEMLLKWVAYGF
KTYFTNAWCWLDFFIVDISLISLAANWMGYAELGPIKSLRTLRALRPLRALSRFEGMRVV
VNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYRCINTTSDELFPMDEVNNKSDC
MAVKEATAEARWVNVKVNYDNVGQGYLSLLQVSTFKGWMDIMYAAVDSREVEEQPSYEIN
LYMYMYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGDKDIFMTEEQKKYYDAMKKLGS
KKPQKPIPRPTNLIQGMVFDLISQQFFDIFIMVLICLNMVTMMVETDDQSPEKEDFLFKL
NVAFIVVFTGECVLKLFALRQYFFTNGWNVFDFVVVILSIAGTMLSDLIEKYFVSPTLFR
VIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVK
KQAGIDDIFNFETFGGSIICLFEITTSAGWDGLLLPMLNKEYPDCDPDIENPGTDVKGNC
GNPGMSMIFFCSYIIISFLVVVNMYIAIILENFNVAQEESGDALCEEDFEMFNETWEKFD
VDGTQFIEYSQLSDFCDTLQPPLRVAKPNRLRLIEMDLPLVIGDRIHCLDVLSAVTQMVL
GDTIEMVAMRESIEAKFILSNPTSDSFAPITTTVRHKEERIAAVVIQRAYRTHLLRRCIH
HAAFMYRCKRMGRKDEGEDAPEKEGMLARRMGVLYGSNVDLAEAMEQADLETLASQQPPT
SETVSHDTGAQSGPEEPPEPNVMVVPVEITNEVLLHSAPNPHLFTLPANLRETIV
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccctgctccctcccccaggcaccgatatgttccgccgtttcacccaggaatcg
ctggcggagatcgagaggctcaaggaggaaagaaaaaagccagcagaagtagagggccat
gtggaaagaaaaaaggccacggaagaagagggccacgaggaggaagagccaacggcccca
aatgctgatctggaggcgggcaagagtctgcccttaatattcggagaccctccgccagag
ctgctcaacacacctctggaggacctggaccccttctacaaagcacagagtacattcatt
gtgatcaccaaaggaaacacaatctacaggttcaacgctgaaccggcttgctacattctg
agcccctttagtgtgattagaagaggagccatcagaattctcatacattcattatttagc
atgttcatcatgattaccattctatcgaactgtgtattcatgacgatgagcaacccacca
gcatggagtaaaaccgtcgagtatgtttttactggaatctatacctttgaggcaacagtc
aaagtgttatcaagaggtttctgtgttggatcttttacattccttcgagatccatggaat
tggctggatttcatggtgatcagcatggcatacgtcactgagtttgttgaccttggcaac
gtgtcagccctcaggacatttcgtgtacttcgagccctcaaaacaattactgtgattcct
ggtttgaaaaccattgtggccgctttgatccagtcggtgaaaaaaatggtggacgtcatg
attctgaccgtcttcgccctcgctgttttcgccctcgtcggccttcagctgtttatggga
aatctgcgtcacaaatgtgtgcggtggcccatcgacacaaatgaaactgcatttgaattt
tttaacaccaccaccacgttaaacgacaccctgtccttcaacaacaccatgggcgtcaat
gagacagcatattccaacagtaccttcaatttcattgagtatattgaaaacacagataat
cactattttttggatggcagcccggatgctctgatttgtggaaacagctctgatgctgga
aagtgcccagaaggatacacatgcatgaaggctgggaggaaccccaactttggctacacc
agttttgactcttttggctgggccttcctggccctctttagactcatgacccaggactac
tgggagaacctcttccagctgatcctgcgggcggctggcaagacatacatgctgttcttt
gtggtgattatctttctgggctccttctacctcatcaacctcatcctggccgtggtagcc
atggcttatgatgaacagaatcaggcaactcagcgagaggccatagagaaagaggaggag
ttccagcggctactagagcaactcaagaatcaggaacagcaggctcacgctcttgggagc
cggctcactctaactagtaagtcactcagtcatcacaccatgtctgagatgacagatgat
gaatccagccctaacaatgacgagaatatcaaggattgtaacgggagaatcatcccccgt
ctgttagtcagagcgcccaccatggtcaagcccactacagagtatgaactcagcgagaag
tcaataggctcttctgtgcacagcatgcttcatctggaagaaccgggcctgacacagaag
tctgttagtgctctcactgtgctcactgcagctgctatggaagagttggaggaggctcag
aggccgtgcccaccgggctggtacaagtttgccgacattttcctcaagtgggactgctgc
ccgcagtgggtgctctttaagaagtgggtgcactttgtggtgatggacccttttgtcgac
ttggccatcaccatctgcatcgtgctcaacacccttttcatggccatggagcactaccca
atgaccccgcagtttgaccacatgctctcagtggggaatctggttttcactgggatcttc
acagcggagatgttcttcaagctgatcgccatggatccctactactactttcaagttggc
tggaacattttcgacagcatcattgtcactctcagtctggtggagctggggctggccaat
gtccaggggctgtctgtcctcaggtccttccgtctgcttcgtgtcttcaaactagccaag
tcctggcccacgctcaacatgctgatcaagattatcggtaactcagtaggagctttagga
aacctgactttggtgctggccatcatcgtcttcatctttgccgtggtcggtatgcaactc
tttggcaagagctacaaggactgcgtgtgcaagatctccacagagtgcgagctgccgcgc
tggcacatgaatgacttcttccactcgttcctcatcgtgttccgcatcctgtgtggggaa
tggatcgagaccatgtgggactgcatggaggtggccggagctgggatgtgtttggtcgtc
ttcctgatggtcatggtcatcggaaatctagtggtgttgaacctcttcctggccttgctg
ctcagctcgttcagcggggacaacctctctgcgggggacgacgacggagagatgaacaac
ctccagattgccatcggcaggatcacgcgaggcatcgactggttcaaagccttcgccatg
cgaattgtcctgcagattctcggcaggaagcccaaagagccagaggagcccgagcggggt
ccgacggacgacgaggaccctaaagcagaggaaattgaaatgaaccacttggacaccggt
cagaatttcaaaatggcagatgggatacctaattgtttggttgaaggccggccctctgga
tttattgtggatggagaactcagtctcaacgtgccgatcgctcagggagagtcagacttt
gaaaacctgggcgaggatgaagaggatgatggtgataatgccaatgactcagagacttca
gatgagaaaaaaaacaaacacttctcggaaaacttagaagaagaacatagtacgctggga
aatgtcaaactgatgggtgctttgactgatggggattcttcagtgtgtagcacagtggac
tatcagccacctgagcctgaaccagaagaagaggaggaagaagagccagaacctgaggag
ccagaggcctgcttcactgacgactgcgtcaggcgctggccgtgtctgactgtggacatc
accgaaggtaaaggcaagaaatggtggaacctccgcagaacttgcttcacaattgtggag
cacgactggtttgaaaccttcatcatcttcatgatcctccttagcagcggagctctggcc
tttgaggacatacacatagaaagacgccgaaccatcaaaattattctggagtacgcagac
aaagttttcacctacgtatttatcatcgagatgctccttaaatgggtggcgtacggcttc
aagacctacttcaccaatgcctggtgttggttagactttttcatcgtagatatttccctg
attagtttagctgccaactggatgggatacgctgagcttggaccaatcaaatccctcagg
actctcagggcgctgaggcctcttcgagcgctgtcaagatttgaagggatgagggtggtg
gtgaacgctctcgttggagcgattccctccatcttcaatgtgctgctggtgtgtctcatc
ttctggctcatcttcagcatcatgggagtcaacctgtttgctgggaagttctaccgctgt
atcaataccacctcggatgagcttttccccatggacgaggtcaacaacaagagcgactgc
atggccgtgaaagaggccacagcggaggcccgctgggtcaacgtcaaagtcaactatgac
aatgtgggacaaggctacctgtctctgcttcaagtgtcaacttttaaaggctggatggac
atcatgtatgctgccgttgactcaagagaggtagaggagcagccttcttatgagatcaac
ctctacatgtacatgtactttgtcatcttcatcatctttggctctttcttcacactcaac
ctcttcattggtgtcatcatcgacaatttcaaccaacagaagaaaaagtttggagataaa
gacatcttcatgactgaggaacaaaagaagtactacgacgccatgaagaaacttggttcc
aagaagccacagaagccaattccacgtccaacgaacctaatccagggaatggtgtttgac
ctcatcagtcagcagttctttgacatcttcatcatggtgctcatctgcctcaacatggtg
accatgatggtggagacggacgaccagagcccggagaaggaagacttcctgtttaagcta
aacgtggctttcattgtcgtcttcactggggagtgcgtgttgaagctgtttgccctgcga
caatacttcttcaccaacggatggaacgtttttgactttgttgtggtcatcttgtccata
gcgggtacaatgctctctgacctgatcgagaagtactttgtgtcaccgactctgttcaga
gtcatcagacttgccagaataggcaggattctgcgtcttattaaaggagcaaagggcatt
cggacgcttctctttgctctcatgatgtcacttcctgccctattcaacattggccttctg
ctcttcctcattatgttcatcttctccatatttggcatgtcaaactttgcctatgttaaa
aaacaggccggaattgacgatatatttaattttgagacgtttggtggcagcattatttgc
ttgtttgagatcacgacgtcagccggctgggatgggcttttacttccaatgctgaacaag
gagtatccagactgcgatccagacattgagaacccgggcacggatgtaaaggggaattgc
ggcaacccgggcatgagcatgatattcttctgcagctacatcatcatctctttcttagtg
gtggtcaacatgtacatcgccattatcttagagaacttcaatgtggcgcaggaggagagt
ggcgacgctctctgtgaggaagactttgagatgttcaatgagacatgggagaagtttgat
gtagatggaactcagttcattgagtacagccagctctcagatttctgtgacaccttgcag
ccgccactgagggttgccaagcccaacaggctccgcctgattgaaatggatctacccctg
gtcattggggaccggatccactgcctggatgtcctgtcggccgtcacgcagatggtattg
ggagacacaattgagatggtggccatgcgggagagcattgaggccaagttcatcctgagc
aaccccacctcagactcctttgcaccgatcaccacgacggtgcgccacaaagaagagagg
atagctgctgtagtcattcagagggcttaccgcacccacctgctgagacgctgcatacac
catgctgcttttatgtaccgctgtaagaggatgggtagaaaggacgaaggtgaagatgca
ccggagaaagagggcatgctcgctcgaaggatgggagtgctctatggaagcaacgtggac
cttgcagaggcgatggagcaggctgatttagaaactctagcaagccaacagcctcctact
tctgagacagtgtcacatgacacaggggcccagagtggtccagaggagccccccgagcca
aatgtcatggttgttcctgtagagattactaatgaggttttattacattctgccccgaac
ccacacctctttaccctccctgcaaatctgagagagacgatcgtataa
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integrated database retrieval system
