KEGG   Epinephelus lanceolatus (giant grouper): 117248436
Entry
117248436         CDS       T07331                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
ely  Epinephelus lanceolatus (giant grouper)
Pathway
ely03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ely00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117248436 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ely03041]
    117248436 (smndc1)
Spliceosome [BR:ely03041]
 Complex A
  U2 snRNP components
   U2 related factors
    117248436 (smndc1)
 Complex B
    117248436 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    117248436 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2730 Chalcone PUA_4
Other DBs
NCBI-GeneID: 117248436
NCBI-ProteinID: XP_033469412
LinkDB
Position
22:27156106..27161582
AA seq 237 aa
MSDDLVKQLSSYKAQLQQVEVALSTDPDNEDLLKLQKDLQEVIDLTKDLLTSQPTESASS
TNGADTVPLKHAWKVGDNCMAVWNQDGQVYEAEIEEIDRENGTAAVTFAGYGNAEVIPLQ
NLRPAEEGKRSDEDGLKPKSRKEQIAEQSEYKKKKAQKKVQRMKELEQEREEQKSKWQQF
NNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYHDTSKYNVRHLMPQ
NT seq 714 nt   +upstreamnt  +downstreamnt
atgtcggacgacttggtgaaacagttgagcagctataaagctcagctacagcaagtagaa
gttgccttatctaccgacccagataatgaagacctcctcaaacttcagaaagacttacag
gaagtcatcgatttgacaaaagacctcctgacctcacagcccactgaaagtgcttccagt
accaatggcgcagacacagtgcccctgaagcatgcctggaaagtgggggacaactgtatg
gctgtgtggaatcaggatggacaggtgtatgaggctgagattgaggagatagaccgggag
aacggcactgcagcagttacctttgctgggtacgggaatgctgaagtgattcctctgcag
aacctcagaccagctgaggaggggaaacgctctgacgaggacggtctaaagccaaaatca
aggaaagagcagatagcagagcagagtgagtataagaagaagaaggcacagaagaaggtg
cagaggatgaaggaattggagcaagagagggaggaacagaagtcaaagtggcaacagttc
aacaacaaagcctactcaaagaacaagaaaggacaggtaaagaggagcatatttgcgtct
ccagaaagcgtcaatgggaaggtgggagtgggaacatgtggtattgcagacaagccaatg
acccagtaccatgacacatcaaaatacaacgtcagacatctaatgccacaatga

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