Epinephelus lanceolatus (giant grouper): 117249602
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Entry
117249602 CDS
T07331
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117249602 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117249602 (irf5)
Transcription factors [BR:
ely03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117249602 (irf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
117249602
NCBI-ProteinID:
XP_033471233
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All DBs
Position
23:6789877..6803508
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AA seq
493 aa
AA seq
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MSVQPRRIRLKPWLLAQVNSGRYPGLQWLSPDHRLFQIPWKHATRHTPSSDEENTIFKAW
ALETGKYQEGVDEPDPAKWKANLRCALNKSREFQLKYDGTKETPVQPYKIYEVCEQSGNI
DAGDDDDEEMPNLMDLSINPRTSDSASFNSFPPHSDVDHFSMSSNGSFGLPHVIPVPLLP
DRGLPMNSDLQAQSGMVDQGSFVHPVGHPNGLQDLSSLPPSAASGPPQPASMEASSMGDV
QNQGDPQNHQPCKYDLLSSVPLTDLDLKFQYRGRTMGSLTVSNPQGCRLYYGHLEPTPEQ
VDLFGPVTLQQVRFPGTSEIQNQKQRFYTEALLDVMDRGLILEIWEQDIYAVRLCQCKVF
WSGLGMPEQGPPNPMEREKKIKVFSLNNFLQGLISFQKGEAQNPPPFEVYFCFGEDWPDK
KPKEKKLIIVQVVPVVARILTEMFSGELSWSTDSIRLQISNPDVKDQTVEQFKELQRLLQ
SQHIQGPWTPNVP
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtccagccccgcaggatccgtctgaagccctggttgttggctcaggtgaacagt
ggcaggtatcctggtctccagtggctcagtccggatcaccgcctcttccagatcccctgg
aaacatgccacacgccacacaccatcatcagatgaggaaaacaccatctttaaggcgtgg
gctctggagacaggtaaatatcaggaaggcgtggacgaacccgaccctgccaagtggaaa
gcaaaccttcgctgcgctctaaacaaaagtcgagagtttcagctaaagtacgacggcacc
aaagaaactccggtgcagccgtacaaaatctacgaggtgtgtgagcagagcgggaacata
gacgctggtgatgatgatgatgaagagatgccgaacctgatggacctcagcattaacccc
aggaccagtgactccgcctccttcaactcctttccacctcattcagatgtggaccacttc
agtatgtcctccaacgggtcatttggacttccacatgtgatcccagtacctctcctcccc
gacagaggcctccccatgaactctgacctccaggctcagagtgggatggtggatcagggg
agcttcgtccatcctgtaggacaccctaatggactccaggacctgagttctctcccccct
tcagctgcctctggtcccccccagccggcttcaatggaggccagcagcatgggggacgtc
cagaaccagggggaccctcagaaccaccaaccctgcaagtacgacctgctgagcagcgtc
ccactaacagatctggacctgaagttccagtaccggggccggacgatgggctccctcacc
gtcagtaaccctcagggctgccggttgtactacggacacctggagccaaccccggagcag
gtggacctgttcggacccgtcaccctgcagcaggtccggttcccggggacatctgagatc
cagaaccagaagcaaaggttctacactgaggccctgctggatgtgatggaccgcggcctg
atcctagagatctgggagcaggacatctacgccgtccgcctctgtcagtgcaaggttttc
tggtctggactgggcatgcccgaacaaggtccgcctaaccccatggagagggagaagaag
atcaaagtgttcagcctcaacaacttcctgcaaggtctgatttcgttccagaaaggtgaa
gctcaaaaccctccacccttcgaggtctacttctgcttcggggaggactggcccgacaag
aaacccaaagagaagaagctcatcatcgtccaggtggtccccgtggtggctcggatcctg
acagagatgttctcaggagaactcagctggtctaccgacagcatccgtctgcagatctcg
aacccggatgtgaaggaccagacggtggagcagttcaaagagcttcagaggctcctgcag
agccaacacatccaggggccctggacccctaacgtcccctga
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