Epinephelus lanceolatus (giant grouper): 117255500
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Entry
117255500 CDS
T07331
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha
KO
K08536
liver X receptor alpha
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03320
PPAR signaling pathway
ely04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117255500 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
117255500 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117255500 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ely03310
]
117255500 (nr1h3)
Transcription factors [BR:
ely03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117255500 (nr1h3)
Nuclear receptors [BR:
ely03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
117255500 (nr1h3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
117255500
NCBI-ProteinID:
XP_033480370
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Position
1:complement(56043495..56064026)
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AA seq
464 aa
AA seq
DB search
MSTLSVTDIPDVGHDESKVFDGASELQLDCMVEESSGSTTMKHDGLLSLADLSQPDDFPV
PPHNGPSLTDMSSPLPVEPSDIKLDPSAGDTSASIDGQPVKRKKGPAPKMLGNEVCSVCG
DKASGFHYNVLSCEGCKGFFRRSVIKSAQYNCKNNGRCEMDMYMRRKCQQCRLRKCREAG
MLEQCVLSEEQIRLKKMKKQQEEETARTSTVVTPTPPQETAALDPQQQEMIEKLVAMQKQ
CNKRSFLDRPKVTPWPQSQDLQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTR
EDQIALLKTSTIEIMLLETSRRYNPAIDSITFLKDFSYNKEDFAKAGLQFEFINPIFEFS
KGMNDLHLDEAEYALLIAINIFSADRPNVQDHDLVERLQQPYVDALRSYIMIKRPNDHLM
FPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVNE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgctgtctgtgactgatatcccagatgttggtcatgatgagagtaaggtgttt
gacggggcctctgagctgcagctggactgcatggttgaggagagcagtggaagcaccaca
atgaagcacgatggcctgctgtcgctggctgacctctcccagccagatgacttccccgtc
cccccccataatggcccttcactaactgacatgagcagccctctgccggtagagccgagc
gacattaagttggatccatctgcaggtgacacatctgccagcatagatggccagccagtg
aagagaaagaaggggcccgcgccaaagatgcttggcaatgaggtgtgcagcgtatgtggt
gacaaggcctctggtttccattacaacgtgttgagctgtgagggctgcaagggcttcttt
cggcgcagcgtcattaaaagtgcccagtacaactgcaaaaacaacggccgctgtgaaatg
gacatgtacatgcggcgcaagtgccagcagtgccgcctgcgcaagtgtcgggaggcgggc
atgctggagcagtgtgtgctctctgaggagcaaatcagactgaagaagatgaagaagcag
caggaggaggaaacagcccgcacgtccacagtggtcacccccacccctccgcaggaaaca
gccgcgctcgatccacagcagcaggagatgattgagaagctggtggccatgcagaagcaa
tgcaacaaaaggtctttccttgaccgaccgaaagtgacaccgtggccacagagtcaggac
ctgcagaaccgagaagtgcgtcagcagcggttcgcccacttcactgagctagcaatcatg
tcagtccaggagattgtggattttgctaagcagcttcctggtttcctggagctcacgagg
gaagaccagatcgctctactgaagacatcaaccattgagattatgctgcttgagacatca
cggcggtacaaccctgctatcgacagcattacatttcttaaggatttcagctacaataag
gaagattttgccaaagcagggcttcagtttgagttcattaaccccatctttgagttttct
aaaggaatgaacgacctgcacctggatgaggcagaatatgcgctgcttattgccatcaac
atcttttctgcagatcgcccgaatgtgcaggatcacgatctggtggagaggctgcagcag
ccctatgtggacgcactgcgctcttacatcatgataaagagaccaaatgatcatttgatg
tttccccgtatgctgatgaagttggtgagcctccgcacactaagcagcgtccactcggag
caggttttcgcccttcgcctccaggacaagaagctgcccccgctgctctctgaaatttgg
gacgtgaacgagtga
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