Epinephelus lanceolatus (giant grouper): 117257648 Help Entry 117257648         CDS       T07331                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism ely  Epinephelus lanceolatus (giant grouper) Pathway ely04010   MAPK signaling pathway ely04120   Ubiquitin mediated proteolysis ely04140   Autophagy - animal ely04144   Endocytosis ely04620   Toll-like receptor signaling pathway ely04621   NOD-like receptor signaling pathway ely04622   RIG-I-like receptor signaling pathway ely05132   Salmonella infection ely05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:ely00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     117257648 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     117257648 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     117257648 (traf6)    04140 Autophagy - animal     117257648 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     117257648 (traf6)    04621 NOD-like receptor signaling pathway     117257648 (traf6)    04622 RIG-I-like receptor signaling pathway     117257648 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     117257648 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     117257648 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ely04131]     117257648 (traf6)    04121 Ubiquitin system [BR:ely04121]     117257648 (traf6) Enzymes [BR:ely01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      117257648 (traf6) Membrane trafficking [BR:ely04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     117257648 (traf6) Ubiquitin system [BR:ely04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     117257648 (traf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 TRAF6_Z2 RING_XB3-XBAT31 TRAF3_RING Sina_ZnF U-box CEP104_ZnF zf-TRAF_2 Prok-RING_4 zf-RING_11 DM Motif Other DBs NCBI-GeneID:  117257648 NCBI-ProteinID:  XP_033483782 LinkDB All DBs Position 1:54952016..54961169 Genome browser AA seq 570 aa AA seqDB search MACFDSNKGSLEEDSYEGAVGGELSGCALAMLEKESLLSPSESPGTFMSSTSSSLQAPAP LQGYDVDFDPPLESKYECPICLMALRNAIQTPCGHRFCKNCIEKSIRDTGQRCPVDNERL SEDQLFPDNFAKREILSLTVRCPNFGCAEKMELRHLENHLAQCQFATVPCPQCQQSVRMS HLEEHKTVECQRRPVSCPDCVTSFVYEERELHEQQCPFASVKCQYCEMDLIRDQMESHCD TDCPKAPIACNFSTFGCKERMQRHNLAQHMQEFTQMHMRYMAEFLRGLSLNGTTPKSLWA LGPSVSSEDQGAAASVSACSGPRGGAASCSSNSAPSQPTEEMQRLREMDGRLVKQDHQLR ELIILKETQAGHLAEIRRRVSMLEETVKELEAQQSHGIFIWRLRGFSAHLRSQEAGLPVV EHSPGFYTGRPGYKLCLRLHLQTPNAPRCSNFISLFVHTMQGAFDGLLTWPFQGTIRLAI LDQGPEGQHHMEVMETKPDLQAFQKPTIQRNPKGFGYVTFLHLQQLSQRAFIKDDTLLIR CEVTPRFDSMFHRDGPTVQPRGHEASVSRD NT seq 1713 nt NT seq  +upstreamnt  +downstreamnt atggcttgctttgacagtaataaagggagtttggaggaggacagctatgaaggagctgtt ggtggagagctgtccggctgtgctttggcaatgctggaaaaagaatcccttctcagcccg tcagagagccccggcaccttcatgagcagcacctcctctagtcttcaggcccctgccccc cttcaaggctatgatgtggattttgacccacccctagagagtaaatacgagtgccctatc tgccttatggctttgaggaatgccatccaaacaccctgtggtcaccgtttctgcaagaac tgcattgagaaatcaattcgtgatacaggacagaggtgccctgtggacaatgaaaggctg tcagaagaccagttgtttcctgataactttgccaaacgggagatactctcgctaactgtc cgctgtccaaactttggctgtgctgagaaaatggagctccgacatttagagaatcacttg gcacagtgtcagtttgccacggtgccttgcccacagtgtcagcagtctgtgagaatgagc cacctcgaggagcacaaaactgtcgagtgccaacggagacctgtgtcatgtccagactgt gtgacaagctttgtttatgaggagagagagcttcatgagcagcagtgtccctttgccagt gtgaagtgccagtactgtgagatggatctcatcagagaccagatggagtctcactgtgat acagattgcccaaaagcacccattgcctgtaactttagcaccttcggatgtaaggaaagg atgcagcgccacaacttggctcagcacatgcaggagttcacgcagatgcacatgcgctac atggctgagttcctgcgtggccttagcctcaacggcaccacacccaaatccctgtgggca ctaggaccttcagtttcctcggaggatcaaggagctgcagcatcagtttcagcctgtagc ggacccagaggaggagctgcaagctgcagcagcaactctgccccgtctcagcccactgag gagatgcagaggctcagggagatggatggacgattagtgaagcaggatcaccagctgcgt gagcttatcatcttaaaagagacacaggccggccatctcgcagagatcaggcgtagagtg tcaatgctggaggagacagtgaaggagctggaagcccagcaaagtcacggtatcttcatt tggcgcctcagaggtttctctgctcacctgcggagccaggaagcaggcctcccagtggtt gagcacagccccggcttctacacaggccgtccaggctacaagctgtgcctgcgcttgcac ctgcagacccccaacgccccgcgctgctccaacttcatctctctctttgtccacaccatg caaggagcttttgacgggctgctgacctggccgttccagggcaccatccgccttgccatc cttgaccagggccccgagggtcagcaccacatggaggtgatggagactaaacccgacctg caagccttccagaagcccaccatccagcgcaaccctaaaggatttggctatgtcaccttt ctgcaccttcagcagctgagtcaaagagcctttattaaagatgacactctactcatccgc tgcgaggtgacacctcgatttgacagtatgtttcaccgcgatggtccgacagtgcagccc agaggacatgaggcctcagtttcaagggactaa

DBGET integrated database retrieval system