Epinephelus lanceolatus (giant grouper): 117259116
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Entry
117259116 CDS
T07331
Name
(RefSeq) LOW QUALITY PROTEIN: breast cancer type 1 susceptibility protein homolog
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03440
Homologous recombination
ely03460
Fanconi anemia pathway
ely04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117259116
09124 Replication and repair
03440 Homologous recombination
117259116
03460 Fanconi anemia pathway
117259116
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ely01009
]
117259116
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117259116
03036 Chromosome and associated proteins [BR:
ely03036
]
117259116
03400 DNA repair and recombination proteins [BR:
ely03400
]
117259116
Enzymes [BR:
ely01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117259116
Protein phosphatases and associated proteins [BR:
ely01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117259116
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117259116
Multi subunit type E3
BRCC complex
117259116
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
117259116
DNA repair and recombination proteins [BR:
ely03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
117259116
BRCA1-A complex
117259116
BRCA1-B complex
117259116
BRCA1-C complex
117259116
BRCA complex
117259116
FA (Fanconi anemia) pathway
Downstream FA components
117259116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
RTT107_BRCT_5
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
zf-RING_UBOX
zf-Nse
zf-RING_5
zf-RING_4
zf-MIZ
zf-RING_10
zf-RING_6
Prok-RING_4
TRAF3_RING
PTCB-BRCT
zf-ANAPC11
Sina_RING
RING_ZNF598
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
117259116
NCBI-ProteinID:
XP_033486240
LinkDB
All DBs
Position
9:2239892..2274696
Genome browser
AA seq
1406 aa
AA seq
DB search
MKTPTASDVRKGISVLWETLQCPICLDLMTAPVSTKCDHQFCKFCMTKLLDNTKQNMASC
PVCKTNITKRGLQESPGFQRLVAGLQDMIMAYEHDTGTNYFTGMSQQKEQSGVTDAEASK
RCHDMSLEDTPGSDHDNVENVDSDALPRSHSSTIAAQNGFARLMGLEDTSPLMTQNEGLD
SGLGDAPPTSDRKVHSSTDNLDPAEIDMSEVVENATSTHKTRGKIESRKLEKASVHLPLT
PDETEQEPLRKSXRKKRKKDSESDKILGEKQKKSLQKVAEWLMKVPTEESLELEKPDEDD
EDSDSSSSASTIDIKQHNIDLNLGRVDRAKALEDQVFGAVYRRGRRGTRAISPPLNVFAE
PSTTGETQVATQKKNTLTPAAVIEKTSSDDKSEGDIEEEQQMIEKVNETSSDIFKEVEQM
EENDIDNDREEASNLPESDKDNSKDEDLCPASDIERKQPGRNSKRKRPNTLQQVDSDLQE
QAKSESTEQKKTEKRKCKNMRSEKGKPARVPKPLVLVGVQNGETSPETRPRSEEIQVHIE
NYPSSEDQDIPVARSTRRSRRLQHFVEEVQEGHKKANLKASIAKKDRNVAKQSDKAKDGT
LDQTASPKNGNTTKVAERNGCIYDEDLGGIENMESSERASSTEDVKESIAEVPNAKTLSE
ASSAWHVPVVPNSTSPAETAMVGPTFESDTPINHFPNSNHLETFANETKCAETENEEDKN
DSELDTEQLLKSFKATKRKSFHLGGPNVKKSRSLDQENVQAAEVEDQMYTKASEITNQEA
LRDHESSVCSDLISPSTSPALKGKPAVEKPDQEVVEASIPDSSCSGQDSVGGICVSRNSV
SSTLTPNKVSKRETGSPHLSVVPQVVDSGLCFVATEHEELNEPSKCSQIKESQLDCTVRN
AGKGTEIRDVGKHSVGITENVLNTESSLTPDGLGGPVGQTIHEAKSNSCGSGELSSHSSI
KSVPRKKTRRLESSSESDCSEEGLPTLKEIFGTSAPPCAVTEDQGDCSRANRCEGEAEQL
SRPPPCPSPDCVNSSQASVDLFGTPDECDAPVNDINVSMESSQFSSEVLVTQQKIEMQKE
LVRLEKLMALVSEVLQEKEDSPAKEAPSKTDRETVPEAEQDSSTRPSDGKGVTQPNVSKQ
HSTAEMAVQRSTHTETSVRGTGATKTPCSSSAVRTLKSNGSPTDGQEDKENNSPPKDRSK
AKMVLASSGLGPNEQIMVKKFAKRVGARVVSQVTPEVTHIIMHTDEQLVCERTLKYFLGI
AGRKWVVSFQWISECFKQKKLLDESVFEVRGDVVNGPNHQGPMRARTTEDNNLLMKGYKI
CFEGPFTDMTTDEMEWMVELCGAAVVKDPLLLDSKQKSHQLVIVQPGSESTSTYSSLSRN
ATVVTRGWLLDTVATYTLQNHNKYTT
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccccaacagcctccgatgtcagaaaggggatttcagtcctttgggagactctg
cagtgccccatatgcttggatttaatgactgcacctgtttctaccaagtgtgaccatcag
ttttgcaaattttgtatgacaaaacttttggacaacaccaaacaaaacatggctagctgt
ccagtgtgtaaaaccaatataaccaaaaggggcttgcaggagagccctgggtttcagagg
cttgtagcaggattgcaggacatgataatggcatatgaacatgacactggcacaaactac
ttcactgggatgtcacagcaaaaagaacaatcaggagtcacagatgctgaagcttctaaa
cgttgccatgatatgtcacttgaagacacacctggcagtgaccatgacaatgtggaaaat
gttgacagtgatgctcttccaaggtctcactcctcgactatagcagctcagaatggattt
gctagactgatgggacttgaagacacaagtcctttgatgacacaaaatgaaggcctggac
agtggcctcggggatgcaccaccaacgtctgataggaaagtgcacagctctacagataat
ttggacccagcagaaattgacatgtcagaagttgtggaaaatgcaacatcaacacacaaa
actagaggtaaaattgaatcccgcaaattggagaaagcctccgttcatctaccattgact
ccagatgagactgaacaagaacctttaagaaagtcctagaggaagaagcgtaaaaaggat
tcagagtctgacaagattcttggggagaaacagaagaaaagtctacagaaagtcgctgag
tggcttatgaaggttccaacagaagaaagtcttgagttagagaaacctgatgaagacgac
gaggactctgacagcagctcttccgcttcaacgatagatatcaagcaacacaacattgat
ttgaatcttgggagagtggatcgtgctaaagccctcgaagatcaggtgtttggggctgtg
tacagacgagggcgaagagggaccagggctatctctcctccacttaatgtttttgctgag
ccttcaacaacaggagaaacacaagtggccacccaaaaaaagaacactctcactcctgct
gctgtcatcgagaaaacaagctctgacgataaaagtgaaggtgacatagaggaagaacag
caaatgatagaaaaagtaaatgaaaccagcagtgacatttttaaagaagtagaacagatg
gaggaaaatgatatagacaacgacagggaagaggcaagcaacttgccagaaagtgacaaa
gacaatagcaaagatgaggatctctgtccagcgtctgatattgaacgaaagcaaccaggc
agaaactcaaagagaaagaggcctaacactctgcagcaggtcgacagtgatttgcaagag
caggcaaagtcagaaagtacagagcaaaaaaagactgagaagaggaagtgtaagaacatg
aggtcagaaaaaggcaagcctgccagagtgcctaaacctcttgttctggttggagttcaa
aatggagaaaccagtcctgagaccagacccaggtcagaggaaattcaggttcatattgag
aattaccccagcagcgaggaccaagatatccctgttgctaggagcaccaggagaagtaga
agacttcaacactttgttgaggaggtccaggaaggtcacaagaaagcaaacttgaaagcc
agtatagctaaaaaagacaggaatgttgcaaagcagtcagacaaagctaaagatggaact
ttggatcaaacagcatcacctaagaatggaaacacaacaaaggtggctgaaagaaacgga
tgtatttatgatgaagacttaggaggaatagaaaacatggaatccagtgagagagcatct
tcaacagaagatgttaaagagtccattgctgaagtgccaaatgctaaaactttgtctgaa
gctagttctgcttggcatgtccctgtggtcccaaactccacaagtccagctgaaacggcc
atggtaggtccaacatttgaaagtgacactccaataaatcatttcccaaacagtaatcat
ttggaaacattcgccaacgagacaaagtgtgcagaaacagaaaatgaggaggataagaat
gacagcgagctggacactgagcaactgctcaagagcttcaaagccaccaaaaggaaatct
ttccatcttggcggcccaaacgtgaaaaagagccgaagtttggaccaagaaaacgtgcag
gctgctgaagtagaagatcagatgtacacaaaagcatctgaaatcaccaaccaagaggca
ttaagagaccacgaaagctcagtttgcagtgatttgatatccccgtctacatcacctgcc
ctgaaaggaaaaccagctgttgagaaaccagatcaagaggtggttgaagcctccatccct
gatagcagttgttcaggtcaggacagcgttggtggtatctgtgtctccaggaatagtgtc
agcagcaccctcactcctaataaagtgtcaaagcgtgaaacaggaagtcctcatctttct
gttgtgccccaagtagtagattctgggctctgcttcgtcgccactgaacatgaggagcta
aatgaaccctcaaagtgttctcaaatcaaagagagtcagcttgattgtaccgtgaggaat
gctggcaaagggacagagataagagacgttggaaaacattcagtcggcatcactgaaaat
gttttaaacacagagtcctctttaactcccgatggcctcggaggaccagttggacaaact
atccatgaagcaaagtcaaacagttgtggtagcggagagctcagctcccattcctccatc
aagagcgtgccaaggaagaagacaaggaggctcgaatcgtcatccgagtcagactgcagt
gaagagggattaccaactttgaaagaaattttcggaacatcagctcctccctgtgctgtg
acagaggatcagggagactgcagtagagctaatagatgtgagggtgaagcagaacagctg
agccgtccacctccgtgccccagccccgactgtgttaactccagccaagcgtctgtggac
ctgtttggcacgccagatgaatgtgatgccccagtaaatgacatcaacgtttccatggaa
tcatcacagttttcaagtgaggtccttgtcacacagcaaaagatcgaaatgcagaaggag
ctggtgaggttggagaagttgatggctctggtgtcagaggtgcttcaggagaaggaagac
agtcctgcaaaagaggcgccctcaaaaacagaccgggaaactgttccagaagcagagcaa
gactccagcacaagaccatctgatggcaaaggggtcacgcagcccaatgtgtcgaagcaa
cacagcactgcagagatggctgtgcagcgctctacacacacagagacaagtgtaagaggc
accggagccactaagacgccctgttcaagttcagcagtcagaacattaaagagcaatggt
tcaccgacagatgggcaagaggacaaagaaaataacagtcctccgaaagatagaagcaaa
gctaaaatggtgcttgcgtcatctggattaggccccaatgaacagataatggtgaaaaag
tttgccaagcgagttggtgcccgtgtggtttcccaggtgacgccggaggtgacccatatc
ataatgcacacagatgaacaactggtctgcgagcgcacactcaagtacttccttggcatc
gcaggcaggaagtgggtagtgagcttccagtggatttcagagtgcttcaaacaaaagaaa
ctcttagatgagagcgtctttgaagtgagaggtgacgtggtgaatggaccaaaccaccag
ggccccatgagagctcgtaccactgaagacaataacttgctcatgaagggctacaagatc
tgcttcgagggcccgtttacagacatgactacagatgaaatggagtggatggtggagctt
tgtggagcagctgtagtcaaagatcctcttctcctcgacagtaaacagaagtcccatcag
ctggtcattgtacagcccggatcagagtcgacgtccacgtacagcagtctctctagaaac
gctacagtcgtgacacgtggttggctcctggacaccgtggcaacctacacactccaaaac
cacaataagtacacaacatga
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integrated database retrieval system
