Epinephelus lanceolatus (giant grouper): 117260792
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Entry
117260792 CDS
T07331
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04010
MAPK signaling pathway
ely04020
Calcium signaling pathway
ely04510
Focal adhesion
ely04540
Gap junction
ely04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117260792 (pdgfrb)
04020 Calcium signaling pathway
117260792 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117260792 (pdgfrb)
04540 Gap junction
117260792 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117260792 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ely01001
]
117260792 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ely04090
]
117260792 (pdgfrb)
Enzymes [BR:
ely01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117260792 (pdgfrb)
Protein kinases [BR:
ely01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
117260792 (pdgfrb)
CD molecules [BR:
ely04090
]
Proteins
117260792 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Adeno_E3_CR1
VEGFR-1-like_Ig-like
RIFIN
Ig_VEGFR-1-like_5th
PPC
Haspin_kinase
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
117260792
NCBI-ProteinID:
XP_033488779
LinkDB
All DBs
Position
10:complement(25936254..25971178)
Genome browser
AA seq
1097 aa
AA seq
DB search
MASKLHLTVTVTAALLYFCTELYCLEITPNDKVLVLTEGSSLTLTCSGSGETTWEFKRDD
VPYFQVQNGGQSYEIVQSSTTSSVLKLKDVSWRHTGVYQCIDQHNGETKEVAVFVPDPDM
WFIESSHGMVTKTSEESTIPCVVTNPSINVTLYERDTDLPISGHYVPSEGYKALLEDRNY
VCRGELNGKVKESQSFYVFSIVVPEAIDAYINASKTVLKQGEPLTVNCTVHGVELVFFSW
DIPNRETINIEPLTDVLPDMSMHSCLIFPRATIAHSGNYICHVHEDIQGQSASASINITV
LERGFVDVKVPQHQNISAKLQENVELRVEIEAYPTPQVRWIKDGATIKGDKPITTRQEHE
IRYVTILTLVRVRTEQKGLYTVLVTNGDDTKEVTFDLEVQVPSQIKDLTDHPLPGKRHMV
TCVAEGVPTPTIQWYSCDSMHKCSNQTAMWQPLTPEPEVLSIQTNASYSKTRKTSQVRSQ
VTFHKLQHVTVRCETTNQAGLLDRRDVKLVSSTLYSQVAVLAAVLALVAIIIISIIILIA
VWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMPRDNLVLGRTLGSGAFGRV
VEATAYGLTHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKH
GPLYLVTEYCRYGDLVDYLHRNKHTLLQYYAEKNQDDSCLISRGSTPLSQRKGYVSFGSE
SDGGYMDMSKDEPSLYVPMQEQIDTIKYADIQPSPYESPYQQDIYQEQGGGRLDLAISDS
SVLTYDDLLGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDS
NYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYS
ALKRGYRMAKPVHASDDVYEIMKKCWDEKFEKRPEFSFLVHSVGNMLADSYKKKYNQVND
NFLKSDHPAVARTKPRLSSPFPIANPAFGSPSPPYIPPDPYNQSPSPREFTQEADTQEVI
TSYNEYIIPIPDPKPEDVFTDVPSESPASSLALEEETDSLSQDTADTLPEEDRLEETSER
DALLGSSGTPEVEDSFL
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaagctccatctgacagtcacggttacagcagctctgctgtatttctgcacc
gagctctactgtctggagatcacacccaatgacaaagtgctcgtccttactgagggctct
tctctcaccctcacctgctccggctcgggggaaacgacgtgggagttcaaaagagacgat
gtgccgtacttccaagttcaaaatggtgggcaaagctacgaaatcgtgcaaagcagtacc
acgtccagtgttttgaagttgaaggacgtgagttggaggcacacaggggtgtatcagtgc
attgatcaacacaatggagagactaaggaggtggctgtttttgttccagaccctgatatg
tggttcatagagagctcccatggcatggtaacaaagaccagtgaggagagcaccatcccc
tgtgtagtcaccaatcccagcatcaatgttaccctatatgagagggacaccgatctgccc
atcagtgggcattatgtccccagtgaggggtacaaggcactgctggaggacaggaactac
gtgtgccgtggagagctgaacgggaaggtgaaagagtctcagtccttctacgtcttcagt
attgttgtcccagaggccatcgacgcctacatcaatgcgtcaaagaccgtcctgaagcag
ggcgaaccgctgacagtaaactgcacggtgcacggagtggagctggtgtttttttcctgg
gatatccccaacagagagactattaacatcgagccgctgacagacgtcctgcccgacatg
agcatgcactcctgcctgatcttccctagggccacgattgcccacagcggaaactacatc
tgccatgtccacgaggatatccaaggccagagtgcctctgccagcatcaacatcaccgtg
ctcgagcgaggcttcgtggatgtgaaagttcctcagcatcaaaacatttcagccaagctc
caagagaacgtggagctgagagtggagatagaagcctaccctacccctcaggtccgctgg
atcaaagatggcgccaccatcaagggagacaaacccatcacaaccagacaagagcatgag
atcaggtatgtcactattctcaccttggtgagggtgagaacggagcagaagggcctttac
actgtccttgtcacaaacggagatgacacaaaggaggtgacctttgacctggaggtccaa
gttccctctcagattaaagacctgaccgaccaccccctgcctgggaagagacacatggtg
acctgcgtagccgagggggtcccaaccccaactatccagtggtacagctgtgacagcatg
cacaagtgtagcaaccagacagcgatgtggcagccgctgacaccggagccagaggtgctg
agcatccagaccaacgccagctacagcaagactcgtaaaaccagccaggtgcggagccag
gtgaccttccacaagctccagcatgtcacggtgcgctgtgagaccaccaaccaagcagga
ctccttgacagaagagacgtcaaactggtgtccagcacgctgtactcccaggtggcagta
ttggctgctgttctagccttggtggccattattatcatatccatcatcatcctcattgct
gtgtggaggaagaaacctcgctacgagatcaggtggaaggtgatagaatctgtgagccag
gacggtcatgagtacatctatgtggaccccatccacctgccctatgacctggcctgggag
atgccgcgagacaacctggtgctgggtcgcactcttggatcaggagcctttggcagagtg
gtggaggcaaccgcgtatggtctcactcattcccagtccagcacaaaggtggctgtgaaa
atgctgaaatctacagccaggaggagtgagactcaggctctgatgtcagagttaaagatc
atgagtcacctgggtcctcacctcaacatcgtcaacttgctgggagcttgcaccaaacat
ggccctctgtacctggtgaccgagtactgtcgctatggcgatctggtggactacctgcac
aggaacaagcacaccctcctgcagtactacgctgagaagaaccaagacgacagctgcctc
atctctagaggaagcactccgctgagccagaggaaaggctacgtgtcctttggaagtgag
agtgatgggggatacatggacatgagtaaagatgagccctcactctacgtgcccatgcag
gagcagatcgacaccatcaagtatgcggacatccagccctccccatacgagtctccctac
cagcaggacatctaccaggagcaaggtggcggcagattggacctggccatcagtgactct
tctgttctcacctatgacgacctgttgggcttcagctaccaagttgcgaaggggatggag
ttccttgcctccaagaattgcgtccatcgtgacctcgctgcccgtaatgtgttgatctgc
gagggcaaactggtgaagatctgcgacttcggcctggccagagacatcatgcatgattcc
aactacatctccaaaggcagcaccttcctgcccctgaagtggatggcaccagaaagtatt
ttccataatttgtacaccaccctgagcgacgtgtggtcatatggcattcttctttgggag
attttcacactgggaggaaccccctaccctgatttgcccatgaatgagttgttctacagc
gctttgaagagaggctaccgaatggccaaacctgtccatgcctcggatgacgtttacgag
atcatgaagaagtgctgggacgagaagtttgagaagaggcctgagttctccttcctggtc
cacagtgtggggaacatgttggcagacagctataaaaagaaatacaaccaagtcaacgac
aacttcctaaagagtgaccaccctgcagtcgcccgcaccaaacccagactctcctcaccc
tttccgatcgccaacccagcatttggctccccatctcccccctacatccccccggacccc
tacaaccagagcccgagccccagggaattcacacaagaggcagacacacaggaagtcata
acttcgtacaacgaatacatcattcccatcccagaccccaagccggaggatgttttcact
gacgtgccgtcagaaagccctgcaagctctctggctctggaggaggagactgactccctg
tcacaggacactgctgacaccctcccagaggaggacaggctggaggagaccagcgagaga
gacgctctgctgggatcttccgggacgcccgaggtagaagacagcttcttgtag
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