Epinephelus lanceolatus (giant grouper): 117261140
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Entry
117261140 CDS
T07331
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ely04515
]
117261140
Cell adhesion molecules [BR:
ely04515
]
Cadherins
Protocadherins
117261140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
DUF4394
Motif
Other DBs
NCBI-GeneID:
117261140
NCBI-ProteinID:
XP_033489310
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All DBs
Position
10:27818915..27822264
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AA seq
827 aa
AA seq
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MMYFTESRMTKTIGYRDWRWQALWWHHFFLLWSTINGQTRYSIPEELKQGSVVGNLAKDL
SLGLSEIFDRKLRVASEAGEQYFSVDAGKGELVVNDRIDREALCGQSASCVLPLQVVVED
PLQLHRIEVEIRDINDNSPSFISNELSLKIAEVALVGTRFLLESATDPDVGSNSLKSYTL
SKNECCSLKIKEMEGGKTVPELVLEKPLDREKKAVHKILLTALDGGNPVRSGTSQITITV
LDTNDNFPVFEKNLYKVTLGEKSLKGVIVIQPKATDADEGLNGEIEFSFGSRTPDVVLSM
FNINPLTGEITLKGELDYETTKSYDIDVIAKDKGSPEMEGHCRVQVDIIDFNDNAPEIVL
TSQPKPVREDAPSGTVVALISARDYDSGDNGKVTLQLTKDSPFNLKPSFSNNYALVTSGA
LDRESRSDYSIEITATDSGSPPLSSKKIIPVSITDVNDNPPIFTQPSYNVYLKENGVPGS
ILYSVSASDLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQ
IQVQAKDQGSPSLSSNATVHVFILDQNDNAPTVIYPSSAMGSLSHQRMPRSAKAGHLVTK
VTAVDADSGHNAWISYKVAEATDASLFTVNLYTGEVRTKRAVSEQDDSSQRLLIEIKDDG
EPVQSATVTVSIQLEDGLHEPILDLRQKAAEPSKKTGRITLYLILSLASVSVLSLVTFLI
LAVKCMRNSRSSGTCCMRRSDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFR
SCMSPMSEYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVS
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgatgtattttactgaatcaaggatgacaaagacaataggataccgagactggagatgg
caggcgctttggtggcatcatttctttctcttgtggagtacaataaatggacagactcgt
tacagcatcccggaggaactgaaacagggctctgtggtaggaaatctagccaaagatcta
agtttgggattatctgagatttttgaccgtaaactgcgtgtcgcctctgaggctggtgag
cagtatttcagtgtggatgcggggaagggcgagctggtggtgaatgacagaatagacaga
gaggctttatgtggacaaagcgccagctgtgttctacctctgcaagtggttgtagaggac
ccgttacagttacaccgaattgaggttgaaatacgagatattaatgataattctcccagt
ttcatttcaaatgaattatctttaaaaatagccgaagtagcattagtgggcactcgcttt
cttttggagagcgcaacggaccccgacgtcggaagcaattcacttaaatcatatactctg
agtaaaaatgagtgttgttcccttaaaataaaggaaatggaggggggtaaaaccgtcccg
gaacttgttttagaaaagcctctagatcgagagaaaaaagctgttcacaaaatattactt
acagcattagacggtgggaatccagtcagatccggaacctcacaaataaccataactgtg
cttgatacaaatgataactttcctgtgtttgagaagaatttatacaaagtaaccttgggt
gaaaaaagtttaaagggggttattgttatacagcccaaagcaacagatgctgatgaaggt
ttaaatggtgaaattgaattctcatttggctctcggacaccagatgtggtattgtccatg
tttaatattaaccccttaacaggtgaaatcactctgaaaggtgaattggactatgaaact
accaaatcatatgacattgacgtaattgcaaaagataaaggtagtcctgaaatggagggc
cactgtcgcgtgcaggtagacattattgacttcaatgataatgcgccagaaattgttctt
acctctcagccaaagccagtacgcgaagatgcgccaagtggcaccgtagttgctttaatc
agtgcgcgagactatgactccggtgataacggtaaagtgacgttgcagctcacaaaagac
tctccttttaatctgaaaccttctttttctaataattatgcactggtgaccagtggtgct
ttagacagagagagccgctcggactacagtattgagataacagccactgattcaggctct
cctcctctgtccagtaagaaaattatacctgtcagcatcactgatgtgaatgataaccct
cctatattcactcagccctcctataatgtttatttaaaagagaatggggtgccaggctct
atactgtactcagtatcagcatctgacctggattttggtgaaaacgccaagatctcttac
tctatactggactctaaagtgcaggacgtgtctgtctcatcttatgtttacattaactca
gataacggcagcatctacagcatgcactcgtttgactatgagaaactcaaggtgtttcag
attcaggttcaggcaaaggatcagggctctccgtctctcagcagcaacgccactgtccat
gtttttatcctggaccagaacgacaatgcccccactgttatttacccctcctccgccatg
ggctccctctctcatcagaggatgccccgctccgccaaagcgggtcacctggttaccaag
gtgacggccgtggacgctgactcgggccataacgcttggatctcctacaaagtggcggag
gccacagacgcctctctcttcactgtcaatctgtacacaggggaggtgaggactaaacgc
gctgtgtccgagcaggacgactcctctcagaggctgctcatagagatcaaggacgacgga
gaaccggtccagtccgccaccgtcacggtgtccatccagctggaggacggcctccatgag
cccatcttagacctccgacagaaagcggccgagcccagcaagaaaacgggcagaatcacc
ctttatttgattctctctctggcctcggtgtccgtgctgtctctggtgacttttctcatc
ttagcggtcaaatgcatgaggaacagcagaagcagcggtacttgctgcatgagacggagc
gactgtgatgattacaagaaccccaacagaaacctgcagattcagctcaacactgatgga
cctataaagtacgtggaggtcctgggaggagacatgttgtctcagagtcagtccttcagg
tcctgtatgtctccaatgtcagagtacagtgatttcactttgataaagcccagcagcacc
actgactttaaggaggtcatcagtgtcctggatgcgtctttgcccgacagcacctggacc
tttgagagccagcaggtgagctga
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