Epinephelus lanceolatus (giant grouper): 117261142
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Entry
117261142 CDS
T07331
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ely04515
]
117261142
Cell adhesion molecules [BR:
ely04515
]
Cadherins
Protocadherins
117261142
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
DUF4394
Motif
Other DBs
NCBI-GeneID:
117261142
NCBI-ProteinID:
XP_033489312
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Position
10:27792103..27794702
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AA seq
824 aa
AA seq
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MGFMERGIMWNKLPAWQVFLWWHHFFLLWSTIDGQTRYSIPEELKQGSVVGNLAKDLGLV
VSELYQRKLRITSEAGKQYFNVDLGKGELVVIDRIDREELCGQRPSCLLPLELVIDNPLQ
LHRVEIEIQDTNDNSPSFFTKEKVVKIAELVNPGARFPLESAQDPDVGPNSVRSYLISKN
DNFKLTVKNHKDGRKIPELVLEKPLDREKLPVHNLILTAVDGGDPVRSGTSEITVIVLDN
NDNAPQFERNIYEANVSEKATPGREILQVKATDADEGLNGKIEYLFAEQTTDLILSLFHI
DPSSGVIVVKGALDHETTPLHRFDVTAKDKGNPEMDGHCGVEIKVVDINDNIPEIIVTSL
TTPVPEDSAVGTVIALISARDPDSGVNGKVTLSVSSKSPFKLNPSVSNHYSLVTNGPLDR
EKNDRYSVKISATDSGKPPLSSEKIILVELLDVNDNPPVFSQPSYVVYVKENHSPGKILC
SVSAADPDSGDNAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQV
QAKDQGSPSLSSNATVHVFILDQNDNAPAVIYPSSAMGSLSHQRMPRSAKAGHLVTKVTA
VDADSGHNAWISYKVAEATDASLFTVNLYTGEVRTKRAVSEQDDSSQRLLIEIKDDGEPV
QSATVTVSIQLEDGLHEPILDLRQKAAEPSKKTGRITLYLILSLASVSVLSLVTFLILAV
KCMRNSRSSGTCCMRRSDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCM
SPMSEYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVS
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgggatttatggagcgaggaataatgtggaacaaattgcctgcatggcaggtgtttttg
tggtggcatcatttctttctcttgtggagtacaatagacggacagacgcgctacagcatc
ccggaggaactcaaacagggctctgtggtaggaaatctagccaaagatttgggtttggtt
gtatctgaactgtaccagcgtaaattgcggataacctctgaagctggtaagcagtatttt
aatgtggacttggggaagggagaactggtggtgattgataggatagacagggaggaactg
tgtggacaaagaccgtcgtgtttgctgcctttggaactagtcatagataaccccctgcag
ctgcacagggtcgaaatagaaatacaggacacaaacgataactctcctagtttctttact
aaagagaaagtggtgaaaattgcagagctggtcaatccaggcgcgcgatttcctttagaa
agtgcacaggatcctgatgtcggccctaattctgttcgctcttacctcataagcaaaaat
gataatttcaaattgactgttaaaaaccacaaggacggcagaaagattcctgaactggtc
ctggaaaaacctcttgatcgagaaaagctgcctgtgcacaatcttatcctcactgctgta
gatggtggagatccggtgcgttcaggcacatctgaaattacagttatagtgcttgacaac
aatgataatgcgccgcagtttgaaagaaatatatacgaagctaatgtcagcgaaaaggca
acacctggaagagaaatattgcaagttaaagctacagatgcagacgaaggactaaatgga
aaaattgaatatttgtttgcagaacaaactacggatctgattttatcattatttcacatt
gacccttcttctggagttattgttgtcaaaggagctttagaccatgaaacgaccccttta
cacagatttgacgtaactgctaaagacaagggtaatcctgagatggacgggcactgtggc
gttgaaattaaagtagttgacattaacgacaacattcctgaaattattgtgacgtcttta
acaacccctgttccagaggattctgcagttggaacagttattgcattaataagtgcaaga
gacccagattcaggcgtcaatggcaaggtcacgttaagtgtgtcttctaaatctcccttc
aagttaaatccttcagtctctaaccactactcattagtgacgaatgggccactagaccgc
gaaaaaaatgaccggtatagtgtcaaaataagtgctactgattctggaaaacccccatta
tcgagtgaaaaaataatacttgttgaactgctagatgtaaatgacaacccaccagttttc
tcccagccttcttatgtcgtttatgtaaaagagaaccattctcctgggaaaatattgtgt
tcagtatcagcagctgatcctgattcaggagacaacgccaagatctcttactctatactg
gactctaaagtgcaggacgtgtctgtctcatcttatgtttacattaactcagataacggc
agcatctacagcatgcactcgtttgactatgagaaactcaaggtgtttcagattcaggtt
caggcaaaggatcagggctctccgtctctcagcagcaacgccactgtccatgtttttatc
ctggaccagaacgacaatgcccccgctgttatttacccctcctccgccatgggctccctc
tctcatcagaggatgccccgctccgctaaagcgggtcacctggttaccaaggtgacggcc
gtggacgctgactcgggccataacgcctggatctcctacaaagtggcggaggccacagac
gcctctctcttcactgtcaatctgtacacaggggaggtgaggactaaacgcgctgtgtcc
gagcaggacgactcctctcagaggctgctcatagagatcaaggacgacggggaaccggtc
cagtccgccaccgtcacggtgtccatccagctggaggacggcctccatgagcccatctta
gacctccgacagaaagcggccgagcccagcaagaaaacgggcagaatcaccctttatttg
attctctctctggcctcggtgtccgtgctgtctctggtgacttttctcatcttagcggtc
aaatgcatgaggaacagcagaagcagcggtacttgctgcatgagacggagcgactgtgat
gattacaagaaccccaacagaaacctgcagattcagctcaacactgatggacctataaag
tacgtggaggtcctgggaggagacatgttgtctcagagtcagtccttcaggtcctgtatg
tctccaatgtcagagtacagtgatttcactttgataaagcccagcagcaccactgacttt
aaggaggtcataagtgtcctggatgcgtctctgcccgacagcacctggacctttgagagc
cagcaggtgagctga
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