Epinephelus lanceolatus (giant grouper): 117263580
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Entry
117263580 CDS
T07331
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain-like isoform X1
KO
K06751
MHC class I antigen
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04144
Endocytosis
ely04145
Phagosome
ely04218
Cellular senescence
ely04514
Cell adhesion molecules
ely05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117263580
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117263580
04145 Phagosome
117263580
09143 Cell growth and death
04218 Cellular senescence
117263580
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117263580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ely04147
]
117263580
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ely00537
]
117263580
Exosome [BR:
ely04147
]
Exosomal proteins
Proteins found in most exosomes
117263580
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ely00537
]
Antigens
117263580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
New_glue
SID-1_RNA_chan
MHC_I_3
ECSCR
Adeno_E3_CR2
SpoIIIAH
Syndecan
DUF5849
DUF4834
EphA2_TM
DUF4079
Motif
Other DBs
NCBI-GeneID:
117263580
NCBI-ProteinID:
XP_033492996
LinkDB
All DBs
Position
12:complement(11536051..11549152)
Genome browser
AA seq
410 aa
AA seq
DB search
MRRIILLLLLCHAASAMIHTLKYFYTASSQVPNFPEFVAVGLVDEVQMFHYDSYTRRAEP
KQDWMSRVTADDPQYWQRQTDIAVGAQQTFKANIEILKPRFNQTGGVHIFQQMSGCEWDD
ETGKVNGYFQDGYDGEDFLAFDINTETWIAPKHWAFITKQKWDSDKAFIANLKSYLTQIC
PDWLKKYVDYGRNSLLRNDLPSVSLLQKSPSSPVSCHATGFYPNSTMMFWRKDGEELHED
VDHGEILPNHDGSFQMSSDLDLSSVPPVDWRRYDCVFQLSGVKEDIITKLDKAVIRTNRG
DAVAKGIMFSEKPSDMTIPIIAAVVVLALVLIAVIGFVVYKRKKAKSPQHKSKISSSSVS
STESRNSDTPLIKESETTSSSGSSTESLSSNTPLIKDLSDSVKGRGKSTP
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggatcattttattgctgcttctctgccacgctgcgtctgcaatgattcacact
ctgaagtatttctacactgcgtcttctcaagtcccaaacttcccagagtttgtggctgtt
gggttggttgatgaagttcagatgttccactatgacagttacaccaggagagcagaaccc
aaacaggactggatgagcagagtcacagcagatgatcctcagtactggcagagacagact
gacattgctgtgggtgcccagcagaccttcaaagccaacattgagattttaaagccacgc
ttcaaccaaactggaggtgtccacattttccagcagatgagtggctgtgagtgggacgat
gagactggaaaggttaatggttattttcaagatggttatgatggagaagactttttagca
tttgacattaacacagagacatggatcgctccgaaacattgggctttcatcaccaaacag
aagtgggacagtgacaaagcttttatagcaaatctgaagtcttacctcactcagatttgt
cccgactggctgaagaagtatgtggactatgggaggaactctctgctgagaaatgacctt
ccctcagtgtctctcctccagaagtctccctcctctccagtcagctgccacgctacaggt
ttctacccaaacagcaccatgatgttctggaggaaagatggagaggagcttcatgaggac
gtggaccacggagagatcctccccaaccatgatggatccttccagatgagtagtgacctg
gacctttcatcagtcccacctgtagactggaggaggtacgactgtgtgtttcagctctct
ggtgtgaaggaggacattatcaccaaactggacaaagcagtgatcaggaccaacagaggt
gacgctgtggctaaaggcatcatgttttcagaaaagcccagtgacatgaccattcccatc
attgctgcagttgttgttcttgctcttgtactcatcgctgtcattggatttgtggtgtac
aaaagaaagaaagctaagtcccctcaacacaagtcaaagatttcttcttcaagtgtctct
tctacagaaagtagaaacagcgacacaccattaatcaaagagtcagagacgacttcttca
agtggctcttctacagaaagtctaagcagcaacacaccattaatcaaagatttgagtgac
agtgtgaaggggagggggaaatccactccgtaa
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