Epinephelus lanceolatus (giant grouper): 117266069
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Entry
117266069 CDS
T07331
Name
(RefSeq) RLA class II histocompatibility antigen, DP alpha-1 chain-like
KO
K06752
MHC class II antigen
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04145
Phagosome
ely04514
Cell adhesion molecules
ely04672
Intestinal immune network for IgA production
ely05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117266069
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117266069
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
117266069
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117266069
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ely04147
]
117266069
Exosome [BR:
ely04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117266069
Exosomal proteins of epithelial cells
117266069
Exosomal proteins of breast milk
117266069
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_3
ig
Ig_2
C2-set_2
I-set
Motif
Other DBs
NCBI-GeneID:
117266069
NCBI-ProteinID:
XP_033496905
LinkDB
All DBs
Position
14:complement(8821660..8828136)
Genome browser
AA seq
242 aa
AA seq
DB search
MSYLFLLLLVMCLLQCSKGKHLLRFLTFCQRDVKDDGQYDIEFDGDQLLYVDPVTYRAVQ
RLPEFAKHLMIDFEMARDTYVSLGNCKYNIPRAIKGENYPPEALAIPTSMIYPKHEMELQ
VPNTLICHVNNFHPPTVAITWTRNGQPVDESEVSQTQYYSNSDFSFQISSYLYFTPQESD
IYSCSVDHISLQEPLTTFWEVAVQTDQQVVETAVCIAGVILGLIGVVTGLWFIVKANKSC
QA
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatctgttcctactgctgctggttatgtgtcttcttcagtgcagtaaaggaaaa
cacttgcttcgctttttgactttctgtcagagggacgtgaaggatgatggccagtacgat
attgaattcgatggcgatcagctcctctacgtcgaccctgtgacctatcgggcggtgcag
cgtctgccagagtttgcaaagcacttgatgattgattttgaaatggccagagacacgtac
gtgtccctgggcaactgcaagtacaacatcccacgagccataaagggagaaaattatcct
ccagaggcccttgccattcccacctccatgatctaccccaaacacgagatggagctccag
gtccccaacacactcatctgccacgtgaacaacttccatccacctacagttgccataacc
tggaccaggaacgggcagccggtggacgagagcgaggtcagtcagactcagtactactcc
aacagcgacttcagcttccaaatctcgtcctacctgtacttcactccgcaggagagcgac
atctactcctgcagcgtggaccacatcagcctgcaggagcctctcacaacattctgggag
gttgcagtccagacagaccagcaggttgtcgagacggcagtgtgtattgctggtgtgatc
ctggggctgattggagttgtcacaggactctggttcatcgtgaaagccaacaagtcctgc
caggcgtag
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