Epinephelus lanceolatus (giant grouper): 117267267
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Entry
117267267 CDS
T07331
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04620
Toll-like receptor signaling pathway
ely04621
NOD-like receptor signaling pathway
ely04622
RIG-I-like receptor signaling pathway
ely05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117267267 (traf3)
04621 NOD-like receptor signaling pathway
117267267 (traf3)
04622 RIG-I-like receptor signaling pathway
117267267 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117267267 (traf3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
ATG16
CCDC113_CCDC96_CC
zf-TRAF_2
Baculo_PEP_C
Sina_ZnF
zf-RING_4
MctB
RING_XB3-XBAT31
AAA_13
Fzo_mitofusin
Snapin_Pallidin
TPR_MLP1_2
DUF724
KxDL
FapA
Fez1
GAS
DUF1664
Motif
Other DBs
NCBI-GeneID:
117267267
NCBI-ProteinID:
XP_033498941
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All DBs
Position
15:31614275..31635767
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AA seq
588 aa
AA seq
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MSAGRSADGREVQIPLQQVAPSLTTPLSVVPPIPQPSHRQANPWPPSDPTASQGVPAGFL
PLHGGFRDHFVETPEAKYCCEACRLVLCQPRQTECGHRFCQSCIKDILSHPNPVCPADME
PLFKDKIFRDVCCHREIMALKVYCRSEANGCQEQMSLQQIPDHLNVCPFYEVPCPLGKCK
ERMMRKEIPDHLSWKCKHRETSCEFCMTKMPLTDLQKHKETVCPAFPVSCPNHCTFSSLP
RSELSSHQHDCPKAQVSCQFHRYGCTFKGLNQDMRQHESTFAAEHLRMMASRNSTLENKV
EDIKGELLERYKVLPALSSRLSELENQNDELREKNRQMEQKLATMQKLMSSHSEKLLEVE
LELRSLRVLRDEVENLRGTLENVRTRLNALEQGGRSGTGSTTHTLASLETQLSVHEIRLA
DMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVAAKTLSLYSQPFYTGYFGYKMCARVYL
NGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFKPDPNSSS
FRRPAAEMNIASGCPLFVSQSVLETGSYIKDDTIFIKVTVDTSDLPDP
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggggaggagtgctgacgggagggaggtgcagattcccctccagcaggtggcg
ccctccctgaccacgcccctatcggtggtcccgcccatccctcagccctctcaccgccaa
gccaatccctggcctcccagcgaccccactgcttcacaaggtgtccctgcaggtttcctg
cctcttcacggaggattcagagatcactttgtagaaactccagaagccaaatactgctgc
gaggcctgcaggctggtcctgtgtcagccccgccagactgagtgtggacaccgcttctgt
cagagctgcatcaaggacatcctcagtcacccaaacccggtatgtccagctgacatggag
cctttgttcaaagacaagatcttccgagacgtttgctgccatcgggagatcatggcacta
aaggtttactgtcgtagtgaagctaacggctgtcaggagcagatgagtctgcagcagata
cctgaccacttgaatgtgtgtccgttctacgaagttccctgtccattggggaaatgtaaa
gagcgaatgatgaggaaagagattcccgaccacctgagctggaaatgtaaacacagagag
accagctgcgagttctgcatgaccaagatgcctctgactgacctgcagaaacacaaagag
acggtgtgtccagcgttcccagtgtcgtgtccaaaccactgcactttctcgtcccttccc
cgcagtgagctgtccagtcaccaacatgactgtcccaaagctcaggtgagctgtcagttc
caccgctacggctgcaccttcaagggtttgaaccaggacatgaggcaacatgagtcgacc
tttgcagctgaacacctgagaatgatggccagcagaaactccacgttagagaacaaggtg
gaggatattaaaggtgagctgttggagaggtataaggtgcttcctgctctcagcagtcga
ctgtctgaactggagaaccagaacgatgagctgagagagaagaaccgacagatggagcag
aaactggccaccatgcagaaactaatgagctcgcactcagagaagctcctggaggtggag
ctggaacttcgttctctccgcgtgctcagagatgaggtggagaacctgagaggaacgctg
gagaacgtccggacgagactgaacgctctggaacaggggggacgcagcgggaccgggtcc
acaacacacactctggcttccctggagactcagctaagtgtccatgagatccgattggcc
gacatggacctgcgtttccaggtgctggagacagcaagctacaatgggactctgatctgg
aagattcgtgactacaagagacggaaacaggaagcggtagctgcaaagacactgtccttg
tactcgcagccattttacaccggatacttcgggtacaaaatgtgcgcccgcgtctacctg
aacggagacggcatgggcaagggaacgcatctgtcgctgttttttgtggtgatgaggggc
gagtacgacgcactgctgccctggcccttcaaacagaaggtgactctgatgctgatggac
cagggaccgtccaggaaacacttgggggacgcctttaagcctgatccaaacagcagcagc
ttcaggcgtcctgcagcagagatgaacatcgcctccggctgccctctgtttgtgtctcag
agcgtcctggagaccggcagctacatcaaagacgacaccatcttcatcaaagttaccgtg
gatacctctgaccttcctgacccgtga
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