Epinephelus lanceolatus (giant grouper): 117267729
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Entry
117267729 CDS
T07331
Symbol
smg6
Name
(RefSeq) telomerase-binding protein EST1A
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117267729 (smg6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117267729 (smg6)
03032 DNA replication proteins [BR:
ely03032
]
117267729 (smg6)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
117267729 (smg6)
mRNA cycle factors
Common to processing body (P body) and stress granule
117267729 (smg6)
DNA replication proteins [BR:
ely03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
117267729 (smg6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
117267729
NCBI-ProteinID:
XP_033499613
LinkDB
All DBs
Position
2:complement(13766209..13779077)
Genome browser
AA seq
1673 aa
AA seq
DB search
MANELDRVRISAAELRAEASNSVNISDCQKDEQQEHHIHKQHRKRDGKRPELQRYQPASG
HGRRHRDSEEGEPGQSDPLVTDSRDSDRPSQSKKKGVSEKVLENHGCTDGGAGTDKREED
RMRGDGSNAQNYRKGGHAQSKTEVNQEKGFAENDREHQEPAEAAKPTRKARKPDREFYQP
GSRRSIQGKDCGVGREQDKPPPMKNNQKTEPDSQLSTGEREGNKKTSIHKQGGKDEEGKG
TQENAKLSKSSETNRKQGSRDLNKPPLPSDASVEKITNKIEKLSMKGKGKVGCENQTSEE
LSCRRGETTDKERRVQGGGTKEEEEKVEKKREKGNRRRRGGEKEKERNQDSRRGEDEAGG
GKIDRGKAEKERDRKAAEADRDNKPGKIGETHQSKGRENRRESRRGDNNNNRSRDTEKDA
AKTERNSDRAVERGDRNKSNANITTPTSKRYSKSDIRRSRNRTYSSSSASSVTSLDGPGL
GMVVESTKWPCLEPRHNNKEGMANSGEGRRSHLQSWTTNGESSTESLEGSEMSDIAEDRR
RKRRGEEEPSAEKQREERNRPKGNKGGSRGILRVSIEKQSSTTPQSGVQQHRKPGLVPRG
RGGGILVLPARTDISHSPEVGQRLLFGGIRGGGASRSRGGRGGGVRRLWDPNNPDQKPAL
ASTQSSQHSSLQQPVYLQTGTGYGQLHFLDTDDEVAGSPPVPQGEHFRSQQAAAMAYYKF
QNSDNPYGYPMSTSNPHSPGTATSQRYPYPYHMGPYQMASPNGMYPGPGVSQFCGSYRGA
GYSQPGAGGSLTFEEVEQQARGELGRLLRAADAQELQLSNLLSRDRVSADGLDRMAQLRA
DLLGLYEQVILTDIDFSDSQNVDQALWKNVFYQVIERFRQLLRDPTCDNTPHIRNMLLTL
LDEGAVFFDAMLQKLQAVYQFKLEDYMDGIAIRARPLRKTVKYALISAQRCMICLGDIAR
YREQASDSANYGKARSWYLKAQQIAPKNGRPYNQLALLAVYTKRKLDAVYYYMRSLAASN
PILTAKESLMSLFEEAKRKAEQLERRRRQEHEGGSRGPAVRGRGRGEDGARVEIWIRPSG
QAATPSTQRGGSESSRDSEQDGELGSLSASDLNKRFILSFLHAHGKLFTKVGMESFPGVA
SRVLQEFRTLLQHGPSLLGSTHMLQIITINMFTIHNAHCRGEDGEVRSVLQEQSIALGLG
MFALLVQRCTELLRDTPAEPVPMADGEEEEGKGEELEGMVRVSAFPLDLRELLPSIKVWS
DWMLGQPDQWNPPPCSLDCSPDVWQCLADLCNVLARVDHEEMPLYKADTEEVEGDEELTV
LQLREDRLLAGFVPLLAAPQEPCYTDRHTDMAIAADCKRVTVLKYFLEALCGQEEPLLAF
KGGKYVSVAASPPPNQSVDTRSREDSLTEKEADDVIVEAESSLSASEGEEDAEEAGDSEN
DIRELKARRHVLANKLAMQQKRRDKIQAVLQTGGQLELEVRPLFLVPDTNGFIDHLGGLK
RLLQCGTYIIVVPLIVITELDGLAKGQDNFGGGVGSGGRSAGGRGNYNVSVAHVRAVQEK
ARLAVAFLEKGFEAREPCLRALTSRGNQLESIAFRSEDTSGQQGTNDDVILSCCLHYCKD
KAKDFMPDQRNGTVRLQREVVLLTDDRNLRVKALTRNVPVRDIPAFLSWAKVG
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaactggacagagtacgaatctcagctgcggaactccgagctgaagcgtcg
aattcagtcaacatttctgactgtcagaaagatgagcaacaggagcatcacatacacaag
cagcataggaagcgtgatggaaagcgtcctgaactgcagcgctaccagccggcatccgga
catggacggcgtcaccgtgacagtgaggagggagaacctggtcaaagtgatcccctggtc
actgattcacgtgacagtgatcgaccatcacagagcaagaaaaagggtgtctctgaaaaa
gttttagagaaccatgggtgcacagacggtggggcaggcacagacaaaagggaagaggac
aggatgagaggtgacggtagtaacgctcagaactatcgaaagggcggccacgcacagtct
aaaacagaagtaaaccaagagaaaggctttgctgaaaatgacagagaacatcaggagcct
gctgaagctgctaagccaacacggaaagcccgcaaaccagaccgagaattttatcaacct
gggagtcggaggagcatccagggaaaggattgtggagttggaagagagcaggataagcct
ccccctatgaagaacaatcagaaaactgagccagattcccagctgagtacaggtgaaagg
gaggggaacaaaaaaacttctatacataagcagggagggaaagatgaagaaggaaaaggt
acacaggaaaatgcaaaattatctaaatccagtgaaacaaacagaaagcaaggaagcaga
gatttgaacaaacctccgttaccctctgatgcttcggttgagaaaattactaacaaaata
gaaaaactcagcatgaaaggaaagggcaaagtgggatgtgaaaaccaaaccagtgaagag
ttaagttgcaggagaggggaaacaactgacaaggaaaggagagtccaagggggaggaaca
aaagaggaggaagaaaaggtagagaagaagagggaaaaggggaatcgcaggagacgggga
ggggagaaggaaaaagagaggaatcaggattccagaagaggagaagatgaagctggtgga
ggaaagatagaccgggggaaagctgagaaggaaagagacaggaaagcagcagaagcagac
agggataacaaaccaggaaagataggagagacacatcaaagcaaaggaagagagaatcgt
agagagagcagaagaggagacaacaacaacaaccggtccagagacactgagaaagatgct
gctaagacagaaagaaattcagacagggctgttgaaagaggcgatagaaacaaatccaat
gcaaacatcacaacaccaacctcaaaacgctattccaaatcagatattcgacgctcacgg
aatcgaacgtacagcagtagctcagccagcagtgtgaccagccttgatggtcctggacta
gggatggttgttgagagtacaaagtggccatgcttagagcctcggcacaataacaaagag
gggatggcaaatagtggagaaggaagaaggagtcatttacaaagctggacaaccaatggg
gaatcatctacagaatcactggaagggagtgagatgagtgacatagcagaagatagaagg
aggaaaagacgtggggaggaagaaccaagtgcagagaagcagagggaagaaaggaacaga
ccaaagggaaacaaaggtggcagtagagggatcctgagggtttctattgaaaaacagtca
agcaccacgccacaaagtggggtgcaacaacatcgcaaaccgggtttggttcctcgtggc
agaggtgggggtatcctggtgcttccagcccgcacagacatctctcattcacctgaggtt
ggacaaaggcttctttttggtggaattaggggaggaggagctagcaggagtagaggaggc
agaggaggaggagtgagacgactctgggatccaaataaccctgaccagaaacctgctctt
gctagcacccagtcatcacagcattcatctctccagcagcctgtatatcttcagacgggg
accggttatggacaacttcactttctggacacagacgatgaggtagcaggcagtcctcca
gtcccccagggtgagcactttcgatcccagcaggctgctgccatggcctactacaaattc
caaaactctgacaacccctacggctaccccatgtctaccagcaacccacatagccctggc
actgccaccagccagcgctatccatatccttatcacatggggccgtaccagatggcttcc
cctaatggtatgtacccaggccctggtgtgagccagttctgtgggagttacaggggagca
ggttattcccagcctggtgcagggggtagtttgacatttgaagaggtggagcaacaagcc
agaggggagctggggaggctgctgagggctgcagatgcacaggagctccagctgagtaac
ctgctgtccagggacagagtgagtgctgatggactggatcgcatggcccagctaagagcc
gaccttttggggctatatgagcaggtcatcctgacagacatcgacttctcagactcacag
aatgtggatcaggctttgtggaagaatgtcttttaccaggtcatagagcgcttcaggcag
ctactcagagaccccacctgtgacaacacccctcatataagaaacatgctgctcacgcta
cttgatgagggggcagtattctttgatgcgatgcttcagaagctgcaggcagtgtaccag
ttcaagttggaggattacatggatggcatagctatcagggctcggccattgcgcaaaacg
gtgaagtatgcacttatcagtgctcagcgctgcatgatttgtctgggagatatagcacgt
taccgggaacaagccagtgactccgccaactatggcaaggctcgcagttggtacctgaaa
gcccagcagattgccccaaaaaatggacgaccatataaccagctggccctgctggcagtc
tatacaaagcggaagttggacgctgtgtattattacatgcgcagcttggcagcttctaac
cctatccttactgcaaaggaaagcctgatgagtctgtttgaggaagctaaacgcaaggca
gagcagcttgagcgaaggcggaggcaggaacatgaaggaggctccaggggccccgcagta
agaggaagaggaagaggggaagacggagcacgtgtggagatttggattcgccctagcgga
caagcagcaacaccatccactcagagaggaggtagcgaatccagcagagactctgagcag
gatggagagctgggcagtctcagtgctagtgatctaaacaagagattcattctgagtttc
ctgcatgcacatggaaagctcttcactaaagttggcatggaatccttccctggagtggcg
agccgtgttctgcaggagttcaggacactactccagcatggcccctcgctactgggcagc
acacacatgctgcagatcatcactattaacatgttcaccatacacaatgcccactgcaga
ggtgaagatggagaagtgcggtcagttttacaagagcagagcatcgccctgggtctcggc
atgttcgcactgctggtgcagcgctgcacggagctgctcagggacactcctgcagaacca
gtccccatggctgatggagaggaggaggagggtaaaggggaagagctcgagggtatggtg
agggtctctgccttcccattggaccttagagaactactgccaagtatcaaagtctggtct
gattggatgttgggacaaccagaccagtggaacccaccaccatgcagtttagattgtagc
cctgatgtttggcagtgcctggctgacctgtgtaacgtgttggcgcgtgtggaccacgag
gaaatgccgctgtacaaagccgacacagaagaagtcgagggagatgaggagttgactgta
ctgcagttaagggaggaccggctacttgctggctttgtaccactgctcgctgcaccacag
gaaccttgttacacagacagacacactgacatggcaatagcagcagattgtaagagagtg
actgtgctgaagtactttctggaggcattgtgtggtcaggaagagcctctgttggccttc
aagggaggcaaatacgtctctgtggcagcttcacctccacctaaccagtcagtggacaca
aggagcagggaggactctctaacagagaaagaggctgatgatgtcatagtcgaggcagag
tcgtctctctccgcatcagagggggaggaggatgccgaggaggcgggagacagtgagaat
gacatcagagagctgaaggcacgacgccacgtccttgccaacaaactggcaatgcaacag
aagcgcagggataaaatacaggcggtactgcagacgggcgggcagttggagctggaagtg
aggcctctctttttggtcccagataccaatggattcattgaccacttgggagggttaaag
agactccttcagtgtggaacatacataatagttgtgccactcattgtgatcacagagtta
gatggcttagctaaaggccaggacaactttggtggaggagtggggtcaggaggacgcagc
gctggtggtcgaggcaactataatgttagtgtggcccatgtgcgggccgtgcaggagaag
gcccggttggcagtggctttcctagagaaaggatttgaagccagggagccgtgtctcaga
gccctgacgagcaggggaaatcagctcgagtctattgccttccgcagtgaagacacctct
ggacagcagggtaccaatgatgatgtgattctttcctgctgcctgcactactgcaaagac
aaggcaaaagacttcatgcctgaccagagaaacgggacagtgaggctccagagggaggtg
gtactcctcacagatgaccgtaaccttagagtgaaagctctgacccgcaacgtcccggtc
cgagacatccctgctttcctcagctgggccaaagttggctga
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integrated database retrieval system
