Epinephelus lanceolatus (giant grouper): 117268068
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Entry
117268068 CDS
T07331
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03420
Nucleotide excision repair
ely04110
Cell cycle
ely04114
Oocyte meiosis
ely04120
Ubiquitin mediated proteolysis
ely04141
Protein processing in endoplasmic reticulum
ely04310
Wnt signaling pathway
ely04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117268068 (rbx1)
04120 Ubiquitin mediated proteolysis
117268068 (rbx1)
09124 Replication and repair
03420 Nucleotide excision repair
117268068 (rbx1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117268068 (rbx1)
04350 TGF-beta signaling pathway
117268068 (rbx1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117268068 (rbx1)
04114 Oocyte meiosis
117268068 (rbx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117268068 (rbx1)
03400 DNA repair and recombination proteins [BR:
ely03400
]
117268068 (rbx1)
Enzymes [BR:
ely01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
117268068 (rbx1)
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
117268068 (rbx1)
Multi subunit type E3
SCF complex
Ring finger protein
117268068 (rbx1)
Cul2 complex
117268068 (rbx1)
Cul3 complex
117268068 (rbx1)
Cul4 complex
117268068 (rbx1)
Cul7 complex
117268068 (rbx1)
Cul8 complex
117268068 (rbx1)
Cul9 complex
117268068 (rbx1)
DNA repair and recombination proteins [BR:
ely03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
117268068 (rbx1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
117268068 (rbx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
117268068
NCBI-ProteinID:
XP_033500120
LinkDB
All DBs
Position
16:34981888..34985004
Genome browser
AA seq
108 aa
AA seq
DB search
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagctatggatgtagatacgccaagcggcacaaacagtggagctagcaagaag
cgatttgaagtaaagaagtggaatgctgtggcgctgtgggcgtgggacattgtggtggat
aactgtgcgatctgtaggaaccacattatggatctctgtatagagtgccaggccaaccaa
gcttctgcaacctccgaggagtgcactgtagcctggggtgtctgcaatcatgccttccat
ttccactgtatttcccgctggctgaaaacgcgacaggtgtgccctctggacaacagggag
tgggagtttcagaaatacggacactag
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