Epinephelus lanceolatus (giant grouper): 117268640
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Entry
117268640 CDS
T07331
Symbol
smcr8a
Name
(RefSeq) guanine nucleotide exchange protein smcr8a
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117268640 (smcr8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117268640 (smcr8a)
Membrane trafficking [BR:
ely04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
117268640 (smcr8a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
117268640
NCBI-ProteinID:
XP_033501150
LinkDB
All DBs
Position
18:36315152..36330187
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AA seq
939 aa
AA seq
DB search
MIGSPDVVAFTKEDEYGQTTPDPWALPEEFSVPLHPLADSNPWAKTSYAKFTKDFILISE
FSEQVGPQPLLTIPDDPKVCGTFDLNYFSLRIMSVDYQASFVGHPPGSGYPRLSFVEDSR
VVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYVSADERKIMLQFQELSLRFSQASEC
LKAGNRRAFAKELQRKLQDLEYTHSVLQKEEGLQREASPQCMYSAHAVEKANELANVEKS
IYEHRDLLRQISSYHHRPRRDPHAVTCQKCVTECLSECEQLLEKYAKLANPFKYTDKEEK
GEEGQGPVDDEGGEQEVDEDEDEVNKRRPSYTPQLIKAKSAKCFDKRLKTLQELCDDTFY
EATVELLKETERSFRGDLCYLHTRRLERALCRKQRVTNFLFEEDLGDDEEDVGGTLRPFC
AVNHAVDNFTLLNPPPIVLGPEPLELHVLEPPDPLNRTQERELGIADNLESSPSDQTLET
QESSEETKGSFSSDKSGVGLAEIQQNLSSMKSEAPDPDSDLTPDPDHNTDLERESSSEEM
ETTAGDDDGDETPVSLLEVVSELEASREDECDGVTDGACEEESDLLVPLDTACCMAQEGF
LYEASAPEAVSRLGQSPQPQPCETLVVNQEPQALLPLQDDYAVGSPCSDSPAAGLELPVG
PLGDAVSRTSVEDGSDCTMSASTGSDRAASPLGYGGVVTLRQRKKAGQGALRFVRQYPFA
MQALWCLLSGRTLVVLGADEGRVRRLVAALALFVPGPGKCGERVQAWLSCSFTLTDLQRW
KLIGLQRVASPVGSSMLYSLSRYSRYISILDADQKTLRCPPYRGQLLANIADHRTYIRRG
STYFLHLQSTLCHMAARAFLFTFTHHLHLPVSPTEGPEVVEGRRRCFLQEQLGLGEEDSQ
ILLYLSQLITQQYLQPDTGSSAAAPCFSFNYTTSVLYKI
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgataggctcacctgacgtggtggcattcactaaagaggatgagtatgggcagacaact
cccgacccctgggctctgcctgaggagttctctgtccctctccatccgcttgctgactcc
aacccctgggctaaaacctcttacgccaagttcaccaaagacttcatcctcatctctgag
ttctctgagcaggtgggccctcagccgctcctcaccatccccgacgaccccaaagtctgt
ggcacctttgatctcaactacttctccctgcgcatcatgtcagtggactaccaagcctcc
tttgtgggacacccgcctgggagtggctacccaaggctcagctttgtggaggactcaagg
gtggtgctgggtgactcaaaggaaggggcgttcgcctacgtccatcacctcacgctttac
gacctggaggcgaggggctttgttcgaccattctgtatggcctacgtctcagcagacgaa
aggaagatcatgctgcagtttcaggagctgtccctgcgcttctcacaggcctctgagtgt
ctgaaagccgggaacaggagagcgtttgccaaggaactccagaggaagctccaagacctg
gagtacactcactctgtgctgcagaaggaggagggcctgcagagagaggcgagtcctcag
tgcatgtactctgctcatgctgtcgagaaagccaacgagcttgcgaacgtggagaagagc
atctacgaacacagagacctgctgagacagatcagctcctaccatcaccgcccgcgccgc
gatcctcatgctgtcacctgtcagaagtgtgtcactgagtgcttgagcgagtgcgagcag
ctgttagagaaatacgccaagcttgccaaccccttcaaatacactgacaaagaggagaag
ggggaggaagggcagggtccagttgatgatgaaggaggtgaacaagaagtggacgaggat
gaagatgaagtcaataaacgcaggccctcctacacgccacagctgatcaaagccaagtcc
gcgaagtgttttgacaagcgcctgaagacgctgcaagagctgtgtgacgatacgttctac
gaggccactgttgagctcctgaaggagactgagaggagttttcggggagacctgtgttat
ctgcacacacgccgcctggagagggcactgtgcaggaaacagagagttaccaacttcctg
tttgaggaggacctcggtgatgatgaggaggacgtagggggaacactgagaccattctgt
gctgtgaaccatgctgtagataattttacactcttaaatccacctcctattgtgctggga
ccagaacctctagagctacatgtcctggagcctccagaccctctcaaccgtactcaagag
cgtgagctcgggattgcagacaatctggagtcctccccctcagaccagactctggagacc
caggagagctctgaggagaccaaaggaagcttcagcagcgataagagcggggtgggtctt
gccgagatccaacagaatctatcaagtatgaagtcagaagctcctgatcctgattctgac
ttgacccctgaccctgatcataacactgacctggagagggagagcagcagtgaggagatg
gagaccactgctggggatgatgacggagacgagacacctgtgtctttgctggaggtggtg
tctgagctggaggctagcagggaggacgagtgtgatggagttactgacggggcttgtgag
gaggagtctgacttgttggttcctttagatacagcatgctgtatggcccaagagggtttc
ctttatgaggcttctgccccggaggcggtgtctcgtcttggccaaagcccccagccgcag
ccctgtgaaaccctggtggtcaaccaggagccccaggccctccttccactacaggatgac
tacgcggtgggttctccctgctcagacagccctgcagctgggctcgagctgcctgtcggg
ccccttggagatgcggtttcccgtacctcagtggaggatgggtcagactgcaccatgagt
gcttctacagggtctgatcgggctgcttctcctcttggctatgggggagtggtgaccctg
cgtcagaggaagaaggctggacaaggagccttgaggtttgtgcgacagtacccctttgcg
atgcaagctctgtggtgtctgctgagcggcaggaccctggtggtgctcggggcagatgag
gggagagtccgcagactggttgctgctctggccctcttcgtgcctggtcctgggaagtgt
ggtgagagggttcaagcctggctgtcctgctccttcacccttactgacctgcagaggtgg
aaactcattggattgcaaagagtagcctcccctgtgggctccagtatgctttactcgctg
tcccgctacagtcgctacatctctatcctggatgctgaccagaagaccttgcgctgtccg
ccgtatcgcggccaactcctcgccaacatagccgaccaccgcacttacatccgccgtggc
tccacctacttccttcacttacagagcaccctctgtcacatggcagccagggccttcctg
tttaccttcacccaccacctccacctgccggtcagccccacggaggggcccgaggtcgtg
gagggccgacgccgctgcttcctgcaggagcagctggggctgggagaggaggacagccaa
atactgctctacctcagccagctcatcactcagcagtacctacagcccgacaccgggagc
agtgcagcagcaccttgttttagttttaattacaccaccagcgttttatataaaatctga
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