Epinephelus lanceolatus (giant grouper): 117268976
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Entry
117268976 CDS
T07331
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117268976 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ely03041
]
117268976 (eftud2)
Spliceosome [BR:
ely03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
117268976 (eftud2)
Complex C
U5 SnRNP specific factors
117268976 (eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
117268976
NCBI-ProteinID:
XP_033501670
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Position
16:complement(16200674..16218886)
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AA seq
971 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSDDDEDDLDAEDRDVDEGDEDDDDEPADADEDVPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKNKQFTLMEQELPATVYDMEFLAD
LMDGPELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDVDLRYTDILFTEQERGVGI
KSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSIRISDGVVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTYSTDENLVVS
PLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYNEFAKRLWGDIYFNPKTRKFTKKAP
SSNSQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLTKEELKLNIRPLLRLVCN
RFFGEFTGFVDMCVQHIPSPQEGARNKIEHTYTGGLDSDLGENMAECDPDGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDSQVCTVGRLWISVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgatctgtatgacgagtttggaaactatattggtccagagctggactctgac
gatgatgaagatgatctggatgcagaggacagggatgtcgacgagggtgatgaagatgat
gatgatgagcctgctgatgccgatgaggatgtccccggtatggaggtggtcctgcatgag
gacaagaagtactatcctacagcagaggaggtttatgggcctgaagtggaaactattgtc
caagaggaagacacacagcctctcacagagcccatcatcaagcctgtgaagaacaagcag
ttcaccctgatggagcaggagttgcctgccactgtttacgatatggaattccttgcagat
ctgatggacggtcctgagctaatccgtaacgtcacactgtgtggtcaccttcaccacggc
aagacctgtttcgtggactgcctgattgaacagacgcacccagaaatcaggaagagagat
gatgtggacctccgatacacagacatcctctttacagaacaggagagaggagttggtatc
aagagcacccctgtcacaatggtcctgccagactccagaggcaaatcttaccttttcaac
atcatggatacaccaggccatgtgaacttctctgatgaggtcacgtcgagcatccggatc
tcagatggtgttgtccttttcatagacgcagcagaaggagtgatgctgaacacagagcgt
ctgatcaaacatgcggttcaggagcgtatggccatcaccatctgcatcaacaaggtggac
cgactcatcgtggagctcaaattgcctcccacagatgcttattataaacttcgccacatt
gtggatgaggtcaacggtttgctcagtacatactccacagacgagaacttagtggtgtct
cctctccttggaaatgtgtgcttcgccagctctcagtacagcatctgtttcaccctgggg
tcctttgcaaagatctactcagacacctacggtgacatcaattataatgagtttgccaag
aggctttggggagacatttattttaaccccaaaactcgcaagtttacaaagaaagctccc
agcagtaactctcagcgcagctttgtggaatttgtcctggagcctctctacaagatcctc
tcacaggtggttggggatgtggacacatctctcccccgagttctggatgagctggggatc
cacctgactaaagaggagctgaagctgaacatcagacccctgctgaggctcgtctgtaac
cgcttctttggagagttcactggctttgtggacatgtgtgtacagcacatcccctcacca
caggagggtgctaggaacaagatagagcacacatacacgggaggactggactcagacctg
ggggagaacatggcagagtgcgaccctgatggtcctttgatgtgccacaccactaagatg
tacagcacagaggacggagttcagttccatgcgtttggcagggtgctgagcgggaccatt
caggcaggccagcctgtcaaggtcttaggagagaactacacccttgaagatgaggaggac
tctcaggtctgcactgtgggccgtctctggatctcagttgccagataccaaattgaagtg
aaccgagtgcctgctggcaactgggttctcatcgaaggttgtgaccagccgatcgtcaag
accgctacgatcacagagcccagagggaatgaagaagctcagatttttaggccacttaag
ttcaacacagcgtcagttataaagattgcagtggagcccgtcaacccctcagagctaccg
aagatgttggacgggctgaggaaggtcaacaagagctatccgtctctcaccacaaaggtg
gaggagtctggagagcatgttatcttagggacaggagagctctacctcgactgtgtcatg
cacgacctgcgcaagatgtactctgagatcgacatcaaagttgctgatcctgttgtgacc
ttctgtgaaacggtggtggagacatcatcactgaagtgcttcgctgaaacgcccaacaaa
aagaataagatcaccatgattgctgagcccttggagaaggggctggctgaggacatcgag
aacgaagtggtgcagatcacatggaacaggaagaagctgggagagtttttccagacgaag
tacgattgggatctgctggccgccaggtccatctgggcctttggaccagacaccacgggg
ccaaacatccttgtagatgacacactgccctctgaggtggacaaggcgctgctcggctca
gtcaaagacagcatcgttcagggcttccagtggggcaccagagagggacctctgtgtgac
gagcccatcaggaatgtcaagtttaagatccttgacgcggtgattgctcaggagcctctc
cacagaggaggaggccaggtcatccccacagccaggagagtggtgtactctgctttcctt
atggccactccaaggttgatggagccctattacttcgttgaggtccaggctccagctgat
tgtgtatctgccgtctacacagtgctggctcgaaggaggggtcacgtcactcaggatgca
cctattccagggtctcctctgtacaccattaaagctttcatcccagccatcgactccttc
ggctttgagacagaccttcgcacacatacacaggggcaggcatttgctctgtctgtgttc
caccactggcagatcgtcccaggtgaccctctggacaagagtattgtcatcaggcctctc
gagcctcaacctgccccccacctggccagagagttcatgatcaagacccgaaggcgcaag
ggtctgagcgaggatgtgagtatcagcaagttcttcgacgatcctatgttgttggagctg
gccaagcaggacgtggtgcttaactaccccatgtga
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