Epinephelus lanceolatus (giant grouper): 117270312
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Entry
117270312 CDS
T07331
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04110
Cell cycle
ely04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117270312 (rb1)
04218 Cellular senescence
117270312 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ely01009
]
117270312 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117270312 (rb1)
Protein phosphatases and associated proteins [BR:
ely01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117270312 (rb1)
Transcription factors [BR:
ely03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
117270312 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
HTH_CHD6-9
Motif
Other DBs
NCBI-GeneID:
117270312
NCBI-ProteinID:
XP_033503731
LinkDB
All DBs
Position
2:3113546..3137833
Genome browser
AA seq
916 aa
AA seq
DB search
MPPKKRNSATTQSKDVKSAESVSADKKESPELSLKKHRDKDAEFVTLCKSLHVTDLVCDR
AWTLWKTVQESMDEIADSQKRVWGACLFVSATDIDVPCFTLTQLQNAVSLNVKQFVALVR
KLDVNLDTVSTKVNSALARMEKKYDVTLALYQRFEKTCKKIFTLVSDDREREAMRSCWTM
FLLAKGRALQMEDDLVISFQLLLCTLELFIKRCPPDLLQPLYKSAISKVQSPPTRTSRRN
QSKAKSRPPEPEMDLQLLTTLCKENECNAEEVKNVYQTSFSAFLDSLDLSRTPDFPQADD
LNQQYEEHYLKSRDFDGRLFFDRHETVLVPKVEISQVERTPKKNQHDEDMVLIPPQTPVR
AAMTSIQQLRGDLTSSGDQPSTNLATYFKNCTVDPTQDVLKRLETLGQAFSQRFGQAVGP
RCVVLGWQRFKLGVRLYYKVMEAMLKSEEKRLSVQNFSKLLNDSTFHTSLLACALEVVMA
TYGESSFKTGGYNHVGGGAGDPVETDVCFPWILDVVNLAAFDFYKVIESFIKAEPTLSKD
IVKHLETCENLIMERIAWRTGSPLFELLKQEHEGEAAEQVETPANFSQPLQHNHTAADLY
LSPMRPGLRILPPESPATPSSQASSQPLTQPAGQTPRLPKSNSLSLFYKKLYRLAYTRLK
ILCSYLLSSHPELEPIIWTLFQHTLQHEHELMRDRHLDQLMMSAMYAICKVKSVDLRFKT
IVTAYKNMANTNQETFKHVLISEGHYDSIIVFYNQVFMQKLKTNILQYASTRPPTLSPIP
QIPRSPYKFPNSPLRVPGSNNVYISPMKSPRMSPGIMTPRSRMLVSIGESFGLSNRFQKI
NQMVNSSDRSFKRTLDLGSTPKPLKRLRFDVDGQDEADGSKSGGDSTLIQKLAEMSSTRS
RMQEQKMKEDAESRKE
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgccacctaaaaagcgaaactctgcgacgacacagagcaaagacgtgaagagtgctgag
agtgtctctgcagacaagaaggagagtccagagttatctcttaaaaaacacagagacaag
gatgctgagtttgtgaccctgtgtaagagccttcatgtgacagacctggtgtgtgaccgt
gcctggacgttgtggaagactgttcaagagtccatggatgaaatcgctgacagtcagaaa
agggtgtggggggcttgtctgtttgtgtcagcgacagacattgatgtcccctgtttcacc
ttaactcagcttcagaatgcagtcagtctgaatgtgaagcagtttgtggcactggtgagg
aagttggatgtgaacctggatactgtaagcaccaaggtgaattcagcactggcacgaatg
gagaagaagtatgatgtgacgctggcgctctaccagcggtttgagaaaacatgcaagaaa
atctttactttggtttctgatgaccgggagagggaggccatgcgtagctgctggacaatg
tttcttttggccaaaggaagggccttgcagatggaggatgacctggtcatatcattccag
ttgctgctttgtacgctggagttattcatcaagcgctgccctcctgaccttctgcagcct
ctttacaaatcagctatcagcaaagttcagagtcctccgacacgaacgtctcgccgcaac
cagagcaaagccaaatcccggcctccagagccagagatggatttgcagcttctcacaact
ttgtgcaaagagaatgaatgcaatgcagaggaggtgaagaatgtataccagaccagtttc
tcggctttcctggactcactggatctttcaagaactccagattttcctcaggcagatgac
ctcaaccaacagtatgaagagcactacctcaagagcagagactttgatgggcgtctattt
tttgacagacacgagactgttcttgtacctaaagtcgaaatatcccaggtggagagaacg
ccaaaaaagaaccagcatgatgaggatatggtactcatccctccccagactccagtcaga
gctgccatgacgtccattcagcagctgaggggtgatctcacctccagtggggatcagcca
tctactaacctagctacctatttcaaaaattgcaccgtggacccaacgcaggatgtgctg
aagcgtttggagacactcggacaggctttcagccaaaggtttggacaggcggtcggtcca
cgctgtgtagtacttggttggcagagatttaaactcggggtcagactgtattacaaagtc
atggaggcaatgctgaaatcggaggagaaacgtctctctgtacaaaatttcagtaaactt
ctcaatgactccacattccacacatcactgctcgcctgtgctttggaggtggtgatggca
acatatggagagagcagttttaagactggaggatacaaccatgttggtggtggtgctggc
gacccggtggaaacagatgtgtgtttcccctggatactggatgtggtcaacctcgccgcc
tttgacttctacaaggtcatcgagagcttcataaaggccgagcccactctgagcaaagat
atcgtcaaacatctggagacctgcgagaacctcatcatggagaggattgcctggaggacg
ggctcgccgctctttgagctgctgaagcaggagcacgagggcgaggcagcagagcaggtg
gagaccccagccaatttcagccagccgctgcagcacaaccacaccgcagctgacctatac
ctgtcccccatgcgtccgggccttcgtatcttgcctcctgagtccccagccacacccagc
tcccaagcttcctcgcagcctctgacccagcctgccggccagaccccacgactcccaaag
tcaaactctctcagcctcttctataaaaaattgtaccgcctggcctacacgaggttgaag
atactctgctcctacctgctgtcctcccaccctgaactggagcccatcatatggaccctg
ttccagcacactctgcagcacgagcatgagctgatgcgagaccgtcacctcgaccagttg
atgatgtcagccatgtatgccatatgtaaagtgaagagtgttgatctgcgcttcaagacc
atcgtcacagcgtacaagaacatggccaacaccaaccaggagacctttaagcacgtgttg
atctctgagggccactatgactccatcatcgtcttctacaaccaagtgttcatgcagaag
ctgaaaaccaacatcctgcagtacgcgtctaccaggccacccaccctctctccaatccca
caaataccacgcagcccctacaagttccccaactcacctctgcgggtgcctggcagcaac
aacgtgtacatctcccctatgaaaagcccacgcatgtccccgggtatcatgactcctcgc
tccagaatgctggtatcaatcggtgaatcttttgggctgtccaatcggttccagaagatc
aaccagatggtcaacagcagcgatcgctcctttaagaggactctggatctgggctccact
ccaaagcctctgaagaggttacgcttcgatgtggacgggcaagatgaggccgacggcagc
aaatctggaggagattctacactgatacagaagcttgcagagatgagctccacccggagt
cgtatgcaggagcagaagatgaaggaggacgcagaatcaaggaaggagtaa
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