Epinephelus lanceolatus (giant grouper): 117270742 Help Entry 117270742         CDS       T07331                                  Symbol thbs1b Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism ely  Epinephelus lanceolatus (giant grouper) Pathway ely04115   p53 signaling pathway ely04145   Phagosome ely04148   Efferocytosis ely04350   TGF-beta signaling pathway ely04510   Focal adhesion ely04512   ECM-receptor interaction ely04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ely00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     117270742 (thbs1b)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     117270742 (thbs1b)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     117270742 (thbs1b)    04148 Efferocytosis     117270742 (thbs1b)   09143 Cell growth and death    04115 p53 signaling pathway     117270742 (thbs1b)   09144 Cellular community - eukaryotes    04510 Focal adhesion     117270742 (thbs1b)   09142 Cell motility    04820 Cytoskeleton in muscle cells     117270742 (thbs1b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ely04131]     117270742 (thbs1b)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ely00536]     117270742 (thbs1b) Membrane trafficking [BR:ely04131]  Endocytosis   Phagocytosis    Opsonins     117270742 (thbs1b) Glycosaminoglycan binding proteins [BR:ely00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    117270742 (thbs1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS Laminin_G_3 cEGF EGF TSP1_CCN Motif Other DBs NCBI-GeneID:  117270742 NCBI-ProteinID:  XP_033504437 LinkDB All DBs Position 18:complement(25605881..25620034) Genome browser AA seq 1169 aa AA seqDB search MKLTGIFLLLMLWSCESARVAESRDDNSVYDLFELVQVPKKSQAVTMVKGDDPYSPAYKI LMPDLIPPVPESAFRDLIDSIHAEKGFLLLLNFKQFKRTRGSLLTVEKRDGSGPVFEIVS NGKANTLDIVYSTENKQQVVSIEDVDLATGHWKNITLFVQEDQAQLYAGCEEVNTAEMDA PITSILTQETPGSAQLRIGKGAVKDRFMGVLQNVRFVFGTSLEAILRNKGCQSSMTTDSM ILQNLNGSSAIRTEYTGHKTKDLQMVCGFSCEDLVSMFKELKGLGVVVKELSNELRKLTD ENKLIMTRIGIHSGVCIHNGVVRKNREEWTVDDCTECTCQNSATVCRKISCPLIPCANAT VPDGECCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQTR DCYLQECDKRFKQDGNWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQLGGKDCEGEGRQT EKCQKSPCPINGNWGPWSPWDTCSLTCGGGVQHRKRLCNDPAPKYGGKECVGNAKDTQMC NKKACPVDGCLSNPCFAGAKCTSFPDGSWKCGKCPAGYTGNGIKCKDVDECKEVPDACFE FNGVHRCENTDPGYNCLPCPPRYSGPQPFGRGVEQAAAKKQVCTPRNPCLDGSHDCNKNA RCNYLGHFADPMYRCECKPGYAGNGHICGEDTDLDGWPNADLVCVENATYHCKKDNCPNL PNSGQEDYDKDGIGDACDNDDDNDGIPDDRDNCPFVYNPRQYDYDRDDVGDRCDNCPYNS NPDQTDTDNNGEGDACAVDIDGDGILNEKDNCDYVYNVDQRDTDLDGVGDMCDNCPLEHN PDQMDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDDND GIPDDKDNCRLAFNPDQLDSDGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFRKFQ MVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYHEFNSVDFSGTFFINTERDDD YAGFVFGYQSSSRFYVVMWKQITQTYWSNKPTKAQGYSGLSIKVVNSTTGPGEHLRNALW HTGNTPGQVRTLWHDPKNVGWKDFTAYRWHLIHRPRTGLIRVVMYEGKKIMADSGNIYDK TYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3510 nt NT seq  +upstreamnt  +downstreamnt atgaagttgacagggatatttttgctattgatgctttggagctgcgagagcgcgcgagtc gcagagagccgagacgacaacagcgtgtatgacttgttcgagctcgtccaagtcccgaag aagagccaagcggtcaccatggtgaagggagacgacccgtacagccccgcctacaagatc ctcatgccggacctgatccccccggtccccgagagcgcctttagggacctgatcgactcc atccatgccgagaagggcttcctcctcctgctcaacttcaagcagttcaaacggaccagg ggcagcctcctgaccgtggagaagcgggacggctccggacccgtgttcgagatcgtctcc aacggcaaagccaacaccttggacatagtttactccaccgagaacaagcagcaggtggtt tccattgaagatgtggatctggcgacgggccactggaagaatatcacgctgttcgtgcag gaggaccaggcgcagctgtacgcaggatgcgaggaggtgaacacagccgagatggatgcg cccatcaccagcatcctgacgcaggagaccccgggcagcgcgcagctcaggatcgggaag ggagccgtgaaggacaggttcatgggagtcctgcaaaacgtgcggtttgtgtttggaaca tctctggaagccatcctccgcaacaaaggatgccaaagctccatgacgactgactccatg atcctgcagaaccttaacggctcctcagccatcaggacagagtacactggacacaagact aaagacctgcagatggtctgtggcttctcctgtgaagacctggtcagcatgtttaaggag ctgaagggcctcggagtagtggtcaaggagctgtccaacgaactccgtaagctgacggat gagaacaagttgataatgacccgcatcggcattcacagtggcgtctgcatccacaacggc gttgtgcgcaagaacagagaggagtggactgtggacgactgcaccgagtgcacctgtcag aactctgctactgtgtgccgcaagatctcctgccccctgatcccctgtgctaatgctact gttcctgatggagagtgctgcccacgctgtggaacaccgagcgactatgcagaggacggc tggtcgccttggtctgaatggacccattgttccgtgtcatgtgggcggggcatccagcag cgtgggcgctcttgcgaccgtatcaataacaactgcgagggcacctctgtgcagacccgc gactgctacctccaggagtgtgacaagcgattcaagcaggacggcaactggagccactgg tcaccctggtcatcctgctccgtcacctgtggtgctggtgtcatcacccgtatccgcctc tgcaactcccccacccctcagcttggaggcaaagactgcgagggagaaggccggcaaaca gagaagtgccagaagtctccgtgccccatcaatggcaactggggaccctggtcaccatgg gacacctgcagtctcacctgtggaggtggtgtccagcatcgtaaacgtctgtgcaatgac cctgcaccaaaatatggtggcaaagagtgtgttggtaatgccaaagacacccagatgtgc aacaagaaagcctgcccagttgatggctgcctgtctaacccctgctttgccggcgccaag tgcaccagtttccctgacggttcctggaagtgtggaaagtgcccagctggctacactggc aatgggatcaagtgtaaagatgttgatgagtgtaaggaggttccagatgcctgctttgag ttcaatggtgtgcaccgctgtgagaacacagatcctggctacaactgtctgccctgccct cctcgctactcaggaccccagccgtttggcagaggtgtggagcaggctgctgctaagaaa caggtgtgcacgccccgtaatccctgccttgatggaagccacgactgcaacaaaaacgcc cgctgtaactatcttggacactttgccgatcccatgtaccgctgcgagtgcaagcccggc tatgctggcaacggccacatctgcggagaggacacagatcttgatggatggcccaacgct gacttggtttgtgtggagaacgccacctaccactgcaaaaaggacaactgtcccaacctc cccaactctggtcaggaagattacgataaggacggcattggagatgcttgtgacaatgat gatgacaatgatggcattcctgatgatagggacaactgtccattcgtgtacaaccccagg cagtatgactacgaccgtgatgatgtgggtgatcgctgtgacaactgtccctacaatagc aacccagaccaaacagacacagacaacaatggagagggcgatgcctgcgctgtggacatt gatggcgatggcatactgaatgagaaggacaactgcgactatgtgtacaatgtcgaccaa agagacacagatctggacggagtgggagacatgtgcgataactgtcccctggaacataat cctgatcagatggattcagatgatgaccgggtgggagacaagtgtgacagcaaccaggac attgatgaggacggacaccagaacaacctggataactgcccatacattcccaacgccaac caggctgaccatgacaaggatggcaagggagatgcctgtgaccatgatgacgacaatgac ggcatccctgatgacaaggacaactgcagactggccttcaatcctgatcaactggactct gatggtgatggtcgtggagatgcttgcaaagatgactttgaccaagacaacgtgcccgac atctatgatgtgtgcccagagaactttgacattagtgagacagacttccgcaaattccag atggttcctctggaccccaaaggcacttcgcagattgatcctaactgggtcgtccgccat cagggtaaagagctggttcagactgtcaactgtgaccctggcattgctgttggttaccac gagttcaactcagtggacttcagtgggactttcttcatcaacacagagagggatgatgat tacgctggctttgttttcggctaccagtccagttccaggttctacgtggtgatgtggaag cagattacgcagacgtactggtcgaataaacccaccaaggcccagggctactctggcctg tccattaaagtggttaactccaccactggcccaggagagcacctcaggaatgccctctgg cacacaggaaataccccaggacaggtccgcactctctggcacgacccaaagaatgttgga tggaaagacttcaccgcttacagatggcatctgatccacagaccgagaacaggacttatt agagttgtgatgtatgagggcaagaagatcatggcagattctggtaatatctatgacaag acatatgctggcggcaggctaggtctttttgtcttctcacaagagatggtatacttctca gacctcaagtatgaatgcagagatgcctaa

DBGET integrated database retrieval system