Epinephelus lanceolatus (giant grouper): 117270921
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Entry
117270921 CDS
T07331
Name
(RefSeq) platelet-derived growth factor receptor beta-like isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04010
MAPK signaling pathway
ely04020
Calcium signaling pathway
ely04510
Focal adhesion
ely04518
Integrin signaling
ely04540
Gap junction
ely04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117270921
04020 Calcium signaling pathway
117270921
09133 Signaling molecules and interaction
04518 Integrin signaling
117270921
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117270921
04540 Gap junction
117270921
09142 Cell motility
04810 Regulation of actin cytoskeleton
117270921
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ely01001
]
117270921
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ely04090
]
117270921
Enzymes [BR:
ely01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117270921
Protein kinases [BR:
ely01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
117270921
CD molecules [BR:
ely04090
]
Proteins
117270921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_PDGFR_d4
Ig_3
I-set
ig
Ig_2
V-set
C2-set_2
VEGFR-1-like_Ig-like
Stevor
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
117270921
NCBI-ProteinID:
XP_033504827
LinkDB
All DBs
Position
2:2085275..2122978
Genome browser
AA seq
1036 aa
AA seq
DB search
MMASTRGQTGGLSVLHFLFGVFLLCPDGGVSLELLPSNPEVLLNSNSNYSVVCSGWSQVT
WRLPQDTQVDGVVVENQGSSSVLQLFNATWRNSGRYTCEEASSYQRRDVDIFIPGRGPEE
WFVPLGPGVVMKEAEEDTIPCVVSDPQLNVRLYQRPGRTPVTGMTYEPGRGFTGRLNDTS
YVCVASRGDEETESQVYYVFSIIVPKVMEVDLTVSSSVLKQGEVLTVNCTVKDTEMVFFS
WDFPRRQEVEPLTDFLPNRIRSFVNISTATVADSGVYVCVVQETVQERTVRKNITVTVLD
RGYVYLWPSGDTNMSSLLHHTVEFSVEVDAHPAPTVLWTKDNQTIPKETTSVTTTHLTGS
RYVSKLTLVRVQMDQTGSYTAIVSNEDDAEEVIFNLEVKAPPKITSLSEVDGKAMVCVSE
GAPPPSVIWYTCHSSQRCSNVTGGWRSLSAALEGVALQETFTEVEERGVTQVCSVLTLQS
LSSLSAVRCEAKNSAGRRARDMRVVSNFLLSQVTVLAVVLVLVILAVVFLIILILLWRKK
PRYEVRWKVIESVSPDGQQYTYLDPAHLPYNSTWEVPRDNVVLGRVLGSGAFGRVVEATI
SGLLHSHSTTKAAVKMVKPSSGAVQSLMSELKVLVHLGPHLNVVNLLGACTRGGPVYLIT
EFCRHGDLVNYLQRNKHTFLQSDTHTKSESDGGYMDMNKEESVQYVAMKELSYADIEPAV
YETPYTPTDQKEALAVLLSDSPVLSLNDLLSFSYQISQAMDFLSSRNCVHRDLAARNVLV
CEGKLVKICDFGLARDLTKDQDYVARGNSFLPVKWMSPESIFQNIYSSQSDVWSYGVLLW
EIFSLGGSPYPDLPMTQEFYSSLKRGYRMSRPDHASHNIYDLMRQCWEEKPQSRPSFSSL
VVSFGNTLTDDYKKRYLRLTEDFMKGDHPAVVGSRLSPSRAAGDQTDGQTDTDGSPAPHI
SEAGPEEAGPSYGTYIIPITDITIETSRDAALAAVSPQLSQDTPEVQEVTSSEDSHQVED
APESSQRHEEEEESCL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgtccactagaggacaaacaggaggtctgagtgtgctgcacttcctgtttggt
gtgttcctgttgtgtcctgatggaggtgtctctctggagctgcttccttcaaaccctgaa
gttctgctgaactcaaactcaaactacagtgtggtgtgttcgggatggagtcaggtgacg
tggcggttacctcaggacactcaggtggacggggttgttgtggagaatcaggggtccagc
agcgtcctgcagctctttaacgccacctggaggaattctgggagatacacctgtgaggag
gcgtcgtcctatcagagaagagacgtggacatcttcatacctggtcgaggtccggaagaa
tggttcgtcccgctgggtccaggtgtggtgatgaaggaggcggaggaagacaccatcccc
tgcgtggtgtccgacccgcagctcaacgtcaggctgtaccaacgtcccggcaggacgcca
gttaccgggatgacatacgagccgggccgtggcttcacgggtcgtctgaacgacacgtca
tacgtgtgcgtggcctctcgcggagacgaggagacggagtcacaggtgtactacgtcttc
agcatcatagttcctaaggtgatggaggtggacctgacggtgtccagcagtgtgttgaag
cagggggaggtcctcactgtcaactgcaccgtcaaagacacagagatggtcttcttctcc
tgggacttcccccgaagacaggaagttgagcctctgactgacttcctacccaatcggatt
cgctccttcgtcaacatctccacggcaactgtggcagattctggtgtgtatgtgtgtgtg
gtgcaggagacggtgcaggaacgaaccgtgaggaaaaacatcacagtgacagtgctggat
cgagggtatgtctacctgtggccatcaggtgacaccaacatgtcgtctctcctccatcac
acggtggagttcagtgtggaggtcgacgcccatcccgcccccaccgtcctctggaccaaa
gacaaccagaccatccccaaggaaaccacctctgtcaccaccacacatctgacaggaagc
aggtatgtgagcaaactgacactggttcgagtccaaatggatcagacaggaagttacaca
gcgatcgtttccaacgaagacgatgccgaggaggtcatcttcaacctggaggtcaaagcg
cctcccaagatcacatctctgtcggaggtcgacggtaaggcaatggtgtgtgtcagcgaa
ggagctccgcccccctctgttatctggtacacctgtcacagctcacaaaggtgcagtaat
gtgacaggtggctggaggagcctatcagcagccttggagggcgtggctctacaggagacc
ttcactgaggtggaggagagaggcgtcacacaggtctgcagtgtgttgactctgcagagt
ctcagctcgctgtcagctgttcgctgtgaagccaaaaactctgcaggacgaagagccaga
gacatgcgagtcgtgtccaactttcttctgtctcaggtcacagtgttggcggtcgttctg
gttctggtcatcctcgccgttgttttcctcatcatcctcatcctcctctggagaaaaaaa
cctcgttatgaagttcgttggaaggtgattgagtcggtgagtcctgatggacagcagtac
acctaccttgaccccgcccacctgccctacaactccacctgggaagtaccacgagacaac
gtagtcctaggtcgggtgttgggttcaggtgcgtttggtcgtgttgtcgaggcgactatc
tccggtctgcttcactctcattctacgactaaagcagccgttaagatggtcaaacccagc
agtggtgctgttcagtctttgatgtcggagttgaaggtgttggttcatctcggtcctcac
ctgaacgtggtcaacctgctcggagcgtgcaccagaggaggtcctgtctatctcatcact
gagttttgtcgtcatggagacctggtgaactacctgcagaggaacaaacacaccttccta
cagagtgacacacacaccaagagtgagagtgatggagggtacatggacatgaataaagag
gagagcgttcagtacgtggcaatgaaggagctcagctatgccgatattgagcctgcggtc
tacgagacgccgtacacgcccacagaccagaaggaggcgctagctgtccttctcagtgac
tctcctgtcctcagtctcaacgacctcctcagtttctcctaccagatctctcaggccatg
gacttcctgtcctccagaaactgtgtccacagagacctggcagcgaggaacgtcctggtg
tgtgaggggaagctggtgaagatctgtgactttggtttggccagagatctgacgaaagac
caggactacgtcgcccgaggaaacagcttcctgccggtgaagtggatgtctccagagagc
atcttccagaacatttacagctctcaaagcgacgtctggtcctacggagtcttactgtgg
gagatcttctctctgggtgggagcccgtaccctgacctccccatgacccaggagttctac
tcgtccctgaagagaggatacaggatgagtcgacctgatcatgcttcgcacaacatttac
gacctgatgagacagtgttgggaggagaaacctcagtctagaccttctttctcctcattg
gtcgtctcctttggcaacacattgactgacgactacaaaaagcgttacctccggctgacg
gaggacttcatgaaaggggaccatccagctgttgttggatccagactgagtccatccaga
gctgctggtgatcagactgatggacagacagacacagacggtagccctgcccctcacatt
tcagaggcagggccagaggaggcaggcccctcctacggtacttacatcatccccatcact
gacatcaccatagaaaccagcagagatgctgcgctggccgcagtcagccctcagctatct
caggacacaccagaagtacaggaagtgacatcatcagaggacagccatcaagttgaggat
gctcctgagtcatcccaacggcatgaggaagaggaggagagctgcctgtga
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