Elizabethkingia sp. 2-6: FCS00_08770
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Entry
FCS00_08770 CDS
T06039
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
elz
Elizabethkingia sp. 2-6
Pathway
elz01501
beta-Lactam resistance
elz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
elz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FCS00_08770
01503 Cationic antimicrobial peptide (CAMP) resistance
FCS00_08770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
elz03036
]
FCS00_08770
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
elz02000
]
FCS00_08770
01504 Antimicrobial resistance genes [BR:
elz01504
]
FCS00_08770
Chromosome and associated proteins [BR:
elz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
FCS00_08770
Transporters [BR:
elz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FCS00_08770
Antimicrobial resistance genes [BR:
elz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FCS00_08770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
YknX_C
RND-MFP_C
Biotin_lipoyl
HH_MFP_RND
BSH_CusB
HH_EMRA
BSH_YknX
BSH_CzcB
BSH_YhbJ
Beta-barrel_RND_2
CzcB_C
HH_CzcB
GARP
Motif
Other DBs
NCBI-ProteinID:
QCO46464
LinkDB
All DBs
Position
1895234..1896397
Genome browser
AA seq
387 aa
AA seq
DB search
MKMLEKSGIIILLSGIILLLNSCSKASETAGQAPPPPQVPVYTIVSSPATTYQEFPAALE
GKNNVEIRSQVDGYLDKIYVEEGSFVRAGQPLFKIDSRTYGEQVNMAQANLQAANANIQK
AKVEVDRLIPLVSSKVVSDVQLKTAKANYAVAVAAAEQAKASLGNARINAGFTTITAPVS
GYIGRIPNKKGSLISRTDPNPLTTLSDVSEIYAYFSLSEMDFIAFKNKYTGATLEEKIKN
MPMVDLVIADNSLYPEKGRMSIIDGQFDKSTGAISIRAIFPNANGTLRNGNTGKVRMPQL
LSSALVIPQESIFEIQDKTYVYILGKDKKVTSKPITISGKTNSYYFVSDGLKAGDKIIYT
GLGMLKDGAAVNPKALSSDSLLQAKPL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcttgaaaaatcaggaattattatactgctttctggtatcatattactacta
aacagttgtagcaaagcctcggaaactgcaggacaggctccgccgccaccgcaggtaccc
gtatatactatagtttcttcaccagctactacttatcaggaatttcctgctgcgcttgaa
ggaaaaaacaatgtagaaataagatctcaggtagatggttacctggataaaatctatgta
gaagaaggctcttttgtaagagcaggtcagcctttatttaaaattgattcccgtacctac
ggggagcaggtaaatatggctcaggctaatttacaggctgctaatgccaacatacaaaag
gctaaagtagaagtagaccgcttaattccccttgtaagttctaaagttgtttcggatgta
cagctaaaaactgcaaaagccaattatgcagtcgctgttgcagcagcagagcaggcaaaa
gcctctttaggaaatgcaagaattaatgccgggtttacaaccattacggcaccagtaagt
ggatatatcggaagaattccgaataaaaaaggaagtcttatttccagaacagatcctaat
ccgttgacaacactttcggacgtaagcgaaatatatgcttatttctctttaagtgagatg
gatttcattgcttttaaaaacaagtatacaggtgcaaccctggaagaaaaaattaaaaat
atgccaatggtagatcttgtgattgctgataacagcctttaccctgagaaaggaagaatg
agtattatcgacgggcaattcgataaaagcacaggagctatcagcataagagcaatcttc
cctaatgctaatggaacactaagaaacggtaacactggtaaagtacgtatgcctcagctg
ttgagcagtgcattggtaattccacaggaatcaatctttgaaattcaggataaaacctat
gtctatattcttggaaaagataagaaagtaaccagtaaacctattaccatttccggaaaa
acaaacagttactattttgtttccgatggtcttaaagccggtgataaaattatctataca
ggtttagggatgttgaaagatggtgctgctgttaatcctaaagcactttcttccgatagt
ctgcttcaggcaaaacctctataa
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