Eleginops maclovinus (Patagonian blennie): 134858891
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Entry
134858891 CDS
T09869
Symbol
slit1a
Name
(RefSeq) slit homolog 1a isoform X1
KO
K06838
slit 1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
emac00536
]
134858891 (slit1a)
Glycosaminoglycan binding proteins [BR:
emac00536
]
Heparan sulfate / Heparin
Axon guidance molecules
134858891 (slit1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
hEGF
Laminin_G_1
LRR_1
LRRNT
LRR_9
EGF_TEN
LRRCT
LRR_14
LRR_EndoS
EGF_Teneurin
EGF_DL_JAG
EGF_3
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
134858891
NCBI-ProteinID:
XP_063731163
LinkDB
All DBs
Position
22:13850682..13934805
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AA seq
1576 aa
AA seq
DB search
MSIRRSCFGAGMGRLALWMWVVMLSALLMGHSSACPALCTCSGTTVDCHGLGIKTMPRNI
PRNTERLELNGNNLTRITKSDFAGLKYIRVLQLMENQITVIERGAFDDMKELERLRLNRN
QLQQLPELLFQKNPGLSRLDLSENFIQSIPRKAFRGATDIKNLQLDKNHIGCIEDGAFRA
LRGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLNCDCHLSWLAQWLRQRPTIGLF
TQCTGPTELRGLNVAEVQKHEFTCSGHQESSSPQPCSIGGGSCPAMCTCSNNIVDCRGKG
LTAIPANLPDTMAEIRLEQNGIKSVPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSL
NSLVLYGNKITDLPKGVFDGLYALQLLLLNANKIHCVRANAFQDLQNLSLLSLYDNKIQT
VAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCASPRRLANKRIGQ
IKSKKFRCSAKEQYFIPGTEDTRLNNACNSDPVCPPKCRCESNVVDCSNLKLTKIPEHIP
SSTSELRLNNNEITTLEATGVFKNLSQLKKINLSNNKITEIEDGSFEGASSVNELHLTAN
QIDSVRSGMFRGLEGLRMLMLRNNKISCVHNDSFTGLHNVRLLSLYDNQLTTITPGAFDT
LQTLSTLNLLANSFNCDCRLGWLGDWLRTRKIVTGNPRCQRPAFLKEIPLQDVALPDFRC
EEGQEESSSCVPRPQCPGECTCLETVVRCSNKHLHTLPKGIPRNVTELYLDGNQFSVLPK
DLSAFKYLQLVDLSNNKISSLTNSSFANMSQLTTLILSYNSLRCIPKMAFSGLRSLRLLS
LHGNEISELPDGIFNDVASLSHLAIGANPLHCDCRLRWLSDWVKTSYKEPGIARCAGPQG
MEGKLLLTTPAKKFECTGGLLCWKQKYNVSSSRIYLQFIFIGLAFPLGDVDTTVQAKCNP
CASSPCLNQGICHSDMVEVYRCSCPPGFKGKNCETALNACVSNPCANGGTCQVDEEAEGE
YRCTCPLGFEGPICQTNIDDCDDNDCENGATCLDGINNYTCFCPPYYTGEMCEEMEDMCA
PGQSPCKHQSTCLITSSGPKCVCSPGYVGDDCSVDYNDCEEHRCQNGAQCVDELNGYSCE
CPEGYNGQLCEVAPSPLSLCELADCQNTAQCVERGGRALCQCPPEFGGPRCEKLVSVNFI
DRDSYLLLSDLKNWPQANITLQVSTAEDNGILLYNGEDDHIAVELYQGHVKVSYDPGSQP
GHAIYSTETINDGQFHTVELVTFDQMVNLSIDGGLPTTMDSFGAVRPLNGEAPLYVGGRG
PLQNTPPSSAGMPVDVHSGAFRLWQLQNGSSFHGCIQNLYINNELQDFTKTQMKPGVVPG
CEPCKKIYCVHGICQPDGAQGPVCHCQPGWSGQQCDEPVLNPCQGSKCVHGKCIPLDTQS
YRCECAEGYRGALCNQQGELFNPCRRLTCKHGRCQISDTGDAYCHCESGYTGELCDAESE
CRGEPVRDFYQVQRGYTICQTTRMVSWVECSGACDTGACCASQRMKRRKYTFECSDGTSF
SEEVEKTIKCGCVGCM
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcagaaggagctgctttggggcaggcatgggacggcttgcactctggatgtgg
gtggtgatgctctccgctctgctcatgggccacagcagcgcctgcccagccctgtgtacc
tgcagtggcaccacagtggactgccatggactgggtatcaaaaccatgccaaggaatatc
ccccgcaacactgagagattggagctgaatgggaataacctcacacgcatcacgaagagt
gactttgctggactcaagtacatccgagttctgcagctgatggagaatcagattactgtg
atcgagcgtggggcttttgatgacatgaaggagctggagagactgcggctgaaccgtaat
caactgcagcagcttcctgagttgctgtttcagaagaaccctggcctgtctcgactagat
ctgagcgagaactttatccagtccatccccagaaaagccttcagaggagctacagacatc
aaaaaccttcagctggataaaaaccacatcggctgcatcgaggatggagccttcagagct
ctgaggggcttggaagtgctgacgctgaacaacaacaacatcagcagcatccctgtctcc
agcttcaaccacatgcccaagctacgaaccttccgtctccactccaacaatctgaactgt
gactgtcacctgtcgtggttggcgcagtggctcagacagaggcctacgattggtcttttc
acccaatgtactggccctactgagctcagaggactcaatgtggcagaggtacagaaacac
gaattcacctgctcaggtcaccaggagtcttccagccctcagccgtgcagcatcggtgga
ggctcttgccccgccatgtgtacctgcagcaacaacatagtggactgcagagggaaaggt
ctaaccgccatcccagccaacctgcccgacaccatggctgagatacgtctggagcagaat
gggattaaatctgttcctcctggagccttctctccctacaagaagctgcgtaggatagac
ctgagcaacaaccagatctcagagatagctcccgatgccttccagggcctgcgctccctc
aactcccttgtgctgtatggaaataagatcaccgacctgcccaagggggtgtttgacggc
ctctacgccctgcaactgctgttgctgaatgccaataagattcactgcgttcgtgccaac
gccttccaggacctgcagaatctctcactgctatcactctacgacaataagatccaaact
gttgccaagggcaccttcacttcactacgagctatacagacccttcacctggcccagaat
ccatttatttgtgactgtaatctgaagtggctggcagactacctgcgctccaaccccatc
gagaccagcggtgcccgctgtgctagtcctcgccgactggctaacaagcgtattggacag
atcaagagcaagaagttccgctgctccgccaaagagcagtacttcatcccaggtacagag
gacacccgtctgaataatgcctgtaacagcgatccagtctgtcctcccaagtgccgctgt
gagtcgaacgtagtggactgctccaacctcaaactcaccaagatccccgagcacatccct
tcatccacctctgaactccgccttaacaacaatgagattacaactctggaggcaactgga
gtttttaagaacctttcccagcttaagaaaattaacctcagcaacaacaagatcacagag
attgaagatgggtcattcgaaggtgcgtcatctgtcaatgagcttcacctcacggccaat
cagatcgactcggtccggagcgggatgttccgcggccttgaggggttacgcatgctgatg
ctgaggaacaacaagataagctgcgtccacaacgacagtttcacagggttgcacaacgtc
cgcctgctgtctctgtacgacaaccagctgaccacaatcactccaggagcattcgacact
ctgcagactctctccacacttaacctcttggccaactcattcaactgtgactgccggctg
ggctggctcggcgattggctgaggactaggaagatcgtgaccggtaaccctcgctgccag
cgtcctgccttcctgaaggagatccctctgcaggatgtggctttgcctgacttccgctgt
gaggaggggcaagaagagtcatcaagctgtgtgcccagaccccagtgtcccggtgaatgt
acttgcctggagactgtggtgcgctgcagtaacaagcacctccacacactgcccaaaggc
atcccaaggaacgtgactgaactgtatctggatggaaaccagttcagtgttttgccaaag
gacctgtctgccttcaaatacctacagctggtagatctgagcaacaacaagatcagctct
ctcaccaactcgtccttcgcgaacatgagccaactcactactctaatcctgagctacaac
tctctgcgttgtatcccaaaaatggccttcagtggactgcgctctctcagactgctgtct
ctccatggcaacgaaatctccgagcttcctgatggcatctttaacgatgtggcctcactt
tcacacttggcaattggtgccaaccccttgcactgtgattgccgcctgcgctggctgtca
gactgggtgaagactagctacaaggagcctggcatcgcccgctgtgctggtcctcagggc
atggaggggaagctgctgctcactacaccggcaaagaagtttgaatgtacaggtgggtta
ttgtgttggaaacagaaatataatgttagcagctctagaatatacctgcaattcattttt
attggtttggcatttcctttaggtgatgtggacactacagtgcaggccaagtgtaacccg
tgtgcgtccagtccctgtctcaaccaaggcatctgtcacagcgacatggtggaggtctac
aggtgcagctgtcctccaggttttaagggcaagaactgtgagacagctctgaacgcctgt
gtgagtaacccctgtgctaacggaggaacctgccaagtggatgaagaggcggagggagaa
taccgttgcacatgtccactgggatttgaaggccccatttgccaaaccaacattgatgac
tgcgatgacaacgactgtgagaacggagcgacctgcctcgatggaatcaacaactacact
tgtttttgtcccccctactacacaggggagatgtgtgaagaaatggaggatatgtgtgcc
cctggacaaagcccctgcaaacatcagtctacctgcctcatcacctccagtggacccaag
tgtgtgtgctctcctggttatgttggtgacgactgcagtgtagactacaacgactgtgaa
gagcatcgctgccagaatggagctcagtgtgtggatgagctgaatggatactcctgcgaa
tgtcctgaaggatacaatggtcagctgtgtgaggtcgccccgtctcctctgtccctgtgt
gagctggccgactgccagaacactgcccagtgtgttgagcgaggtggacgggccctctgc
cagtgtcccccggagtttgggggaccacgctgcgagaagcttgtcagcgtcaactttatt
gacagagactcctacctgctgctctctgacctcaagaactggccacaagctaacatcaca
ctacaggtgtcaacagctgaggataatggcatcctgctgtacaatggagaagatgatcat
attgctgtggagctctaccaaggtcatgtcaaagtcagctatgacccaggcagccagcca
ggacatgccatctacagtaccgagactatcaacgatggccagttccacacagtggagttg
gtgacctttgaccagatggtgaacctgtccattgacgggggtctccctaccacaatggac
agcttcggggcggtgcggcccctcaacggggaggctccactatacgtggggggtaggggc
cctctccagaacacacctccctcctctgcaggcatgccggtggatgtacattcaggcgct
ttccgtctctggcagctccaaaacggctccagtttccatggctgtatccagaacctgtac
atcaacaatgagctccaagacttcaccaagacccagatgaagcctggcgtggtacccggc
tgcgagccctgcaagaagatctactgtgtgcatggcatctgccagcctgacggggctcag
ggacctgtgtgccactgccagccgggctggagcgggcagcagtgtgacgagcctgtgctc
aacccctgccagggcagcaagtgcgtccatggaaagtgcatcccactggacactcagtcg
taccgctgcgagtgtgcagagggttatcgtggcgccttgtgtaaccaacagggagagctg
ttcaacccctgccgtcgcttgacctgcaaacacggtcgctgccagatctcagacacaggc
gatgcctactgtcactgcgagagtggctacactggggaactgtgtgatgcagagtctgaa
tgccgaggggaacctgtgcgagacttctatcaggtccagcgaggctacaccatctgccag
acgacacgcatggtctcttgggtggagtgctccggagcttgcgacaccggggcctgctgc
gccagccagcgaatgaaacgccggaaatacacctttgaatgcagcgatggaacctccttc
agcgaggaagtggaaaagaccatcaagtgcggctgcgtgggctgcatgtag
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