Entry |
|
Name |
(RefSeq) protocadherin gamma-C5-like
|
KO |
K16497 | protocadherin gamma subfamily C |
|
Organism |
emac Eleginops maclovinus (Patagonian blennie)
|
Brite |
KEGG Orthology (KO) [BR:emac00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:emac04515]
134860076
Cell adhesion molecules [BR:emac04515]
Cadherins
Protocadherins
134860076
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
23:complement(13537301..13539999)
|
AA seq |
849 aa
MTKTIGYRDWRWQALWWHHFFLLWSTINGQTRYSIPEELKQGSVVGNLAKDLSLGLADMF
YRKLRLSSEAGEQYFSVDAGKGELVVNDRIDREALCGQSASCVLPLKVVTENPLQLHRIE
VEIRDINDNSPIFSIEERSLKIAESTATGIRFPLETAQDQDVGSNSVKSYTLSKDECFSL
RIKELSGNRKVPELVLEKVLDREKQSVHQLLLTALDGGNPVKTGTTKIVVTVLDNNDNVP
VFKKPLYNVTIHENNVAGSVIVKVEATDADEGVNGEIAYAFAEHTPQALLSIFHLHSGTG
DISLVGPLDYESNQMHEIDITARDKGIPEMEGHCRVQFTLIDINDNAPEIVLTSNPNPVR
EDAGRGTVVALISARDHDSGNNGKVTLQITKGFPFSLKPSFSNNYALITSGLLDRERFSE
YNIEITATDSGSPPLSSKKMIPVSITDVNDNPPLFTQPSYNVYLKENGVPGSILYSVSAS
DHDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYCMHSFDYEKLKVFRIQVQAKDQ
GSPSLSSNTTVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKVGHLVTKVTAVDAD
SGHNAWISYKLAEATDASLFTVNLYTGEVRAKRAASEQDDSSQRLLIEIKDDGEPVQSAT
VTVSILLEDGNEPIVDLRQKAAEPSRKTGRITLYLILSLASVSVLSLVTFLILAVKCMRN
SRSSGSCCMRRSDCDNYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFRSCMSPISE
YSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSRKKGHLQCNLILLFTFFNIFI
FSLMKCVFW |
NT seq |
2550 nt +upstreamnt +downstreamnt
atgacaaagacaataggataccgagactggagatggcaggctctttggtggcatcatttc
tttctcttgtggagtacaataaatggacagactcgttatagcatcccggaggaactaaaa
cagggctctgtggtaggaaatctagccaaagatctgagcttgggtctagcagacatgttt
taccgtaaacttcgtctctcctctgaggctggtgagcagtatttcagtgtggatgcgggg
aaaggcgagctggtggtgaatgacagaatagacagagaggctttatgtggacaaagcgcg
agctgtgttttgcctttaaaggttgtaacagagaatccactacagttacaccgcatcgaa
gtagagataagggatataaacgacaattctcccattttttcaattgaggagcgatcttta
aagatagcagaatctactgccacgggcatacgctttcctttagaaaccgcacaggatcag
gacgttggtagtaattcggtaaaatcttataccttaagtaaagatgagtgtttcagttta
aggataaaagagttgtctggtaatcgaaaggttccagagctagtactagaaaaagtgctt
gatagagagaaacaaagtgtccatcagttattactgacagctttagacggaggcaatcct
gtcaaaactggaaccacaaaaatcgttgttactgtactcgacaacaacgacaatgtcccc
gttttcaaaaagcccttgtataatgtaactatacatgaaaataatgtagctggttctgta
attgtaaaagttgaagcaacagatgcagatgagggtgttaatggagagattgcgtacgcc
tttgctgagcatacaccccaggcattattgtcaatttttcatttacactcgggcacaggt
gacatttccttagtagggccattagattatgaaagcaatcaaatgcatgaaatagatatt
acggcaagagataaaggcattcctgagatggaaggccactgccgtgtgcaatttacacta
atagatattaatgataatgccccagaaatagttctcacttcaaacccaaacccagtacgt
gaagatgcagggagaggcacggttgttgccttaatcagtgcacgagaccatgactccgga
aataacggtaaagtgacgttacaaatcaccaaaggttttccctttagtcttaaaccatct
ttttctaataattacgcactgataacaagtggtttgttagaccgagagcgtttctcggag
tacaatattgagataacagccactgattcaggttctcctcctctgtccagtaagaaaatg
atacctgtcagcatcactgatgtgaatgataacccgcctttattcactcagccatcctat
aatgtgtatttaaaagagaatggggttccaggctctatactgtactcagtatcagcatct
gatcatgattttggtgaaaacgccaaaatctcctactccatactggactctaaagtgcag
gacgtttctgtgtcgtcttatgtttacattaactcagataacggcagcatctactgcatg
cactcttttgactatgaaaaactgaaggtgtttcggatacaggttcaggcaaaggatcag
ggctctccgtctctcagcagcaacaccactgtccatgtttttatcctggaccaaaacgac
aatgcccccgctgttatttacccctcctccgctgccctgggctccctctctcaccagagg
atgccacgctccgctaaagtgggtcacctggttacaaaggtgacggctgtggacgctgac
tcgggccataacgcctggatctcttacaagctggcggaggccactgacgcctctctgttc
actgtcaatctgtacacaggggaggtaagagctaaacgcgctgcgtccgagcaggacgac
tcctctcagaggctgcttatagagatcaaggacgacggggaaccggttcagtccgccacc
gtcacggtgtccatcctgttggaggacggcaatgagcccatcgtagacctccgacagaaa
gcggccgagcccagcaggaaaactgggagaatcaccctgtatttgattctctctctggcc
tcggtgtccgtgctgtctctggtgacttttctcattttagcggttaaatgcatgaggaac
agcagaagcagcggtagttgctgcatgagacgcagcgactgtgataattacaagaacccc
aacagaaacctgcagattcagctcaacaccgatggacctataaagtacgtggaggtcctg
ggaggagacatgatgtcccagagtcagtccttcaggtcctgcatgtctccaatatcagag
tacagtgatttcactttgattaaacccagcagcaccactgactttaaggaggtgatcagt
gttctggatgcgtctttacccgacagcacctggacctttgagagccagcaggtgagccga
aaaaaaggacacctacagtgtaatttaatattgttgttcacatttttcaacatcttcatc
tttagcctaatgaagtgtgtgttttggtga |