Eleginops maclovinus (Patagonian blennie): 134863706
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Entry
134863706 CDS
T09869
Symbol
traf6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04010
MAPK signaling pathway
emac04120
Ubiquitin mediated proteolysis
emac04140
Autophagy - animal
emac04144
Endocytosis
emac04620
Toll-like receptor signaling pathway
emac04621
NOD-like receptor signaling pathway
emac04622
RIG-I-like receptor signaling pathway
emac05132
Salmonella infection
emac05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134863706 (traf6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134863706 (traf6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134863706 (traf6)
04140 Autophagy - animal
134863706 (traf6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
134863706 (traf6)
04621 NOD-like receptor signaling pathway
134863706 (traf6)
04622 RIG-I-like receptor signaling pathway
134863706 (traf6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134863706 (traf6)
09171 Infectious disease: bacterial
05132 Salmonella infection
134863706 (traf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emac04131
]
134863706 (traf6)
04121 Ubiquitin system [BR:
emac04121
]
134863706 (traf6)
Enzymes [BR:
emac01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134863706 (traf6)
Membrane trafficking [BR:
emac04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
134863706 (traf6)
Ubiquitin system [BR:
emac04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
134863706 (traf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
TRAF6_Z2
zf-RING_5
U-box
RING_XB3-XBAT31
Sina_ZnF
TRAF3_RING
zf-RING_11
Prok-RING_4
zf_UBZ
zf-TRAF_2
Motif
Other DBs
NCBI-GeneID:
134863706
NCBI-ProteinID:
XP_063738416
LinkDB
All DBs
Position
4:complement(25937245..25944526)
Genome browser
AA seq
573 aa
AA seq
DB search
MACCESNKGSLEEDSYDVAVGEELSGCALAMLEKERESILSPSESPRTFSSSLSASLQAA
VPLQGYDVEFDPPLESKYECPICLMALRNAIQTPCGHRFCKNCIEKSIRDAGQRCPVDNE
RLSEEQLFPDNFAKREILSLMVRCSNSGCGDRMELRHLEKHLAQCEFATVPCPQCQQSVR
QSQLEEHTTVECKRRPVSCPDCVACFVHEDRELHEQQCPFANVKCQYCEMDLIRDQIESH
CDTDCPKAPIACNFSTFGCKERMQRHNLAQHMQEFTQMHMRYMAEFLRGFSLNGTTPKSL
WTLGPSVSSDDQGAGAAAAVSACSGPRGAAGCSSNCAPSPPTEEVQRLREMDGRLVRQDH
QLRELIILKETQSGQLAELRRRVSSLEETVKELESQQCHGIFIWRLRGFAALLRNQEAGL
PVVEHSPAFYTGRPGYKLCLRLHLQAPNAPRCSNYISLFVHTMQGTFDGQLTWPFQGTIR
LTILDQGPEGQHHTEVMETKPDLQAFQKPTIQRNPKGFGYVTFLHLQQLSQRAFVKEDTL
LIRCEVTPRFDNVIHREGPTVQPRGPEAAISRD
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggcctgctgtgaaagcaataaggggagtttggaggaggacagctatgatgtagctgtt
ggtgaagagctgtccggctgcgcgttggcaatgctagaaaaggagcgagaatccatcctc
agcccttcagagagccctcgcaccttcagcagtagcctctccgctagccttcaggctgct
gtccccctccagggttatgatgtggagtttgacccacccttagagagtaaatacgaatgc
cctatctgcctcatggctttaaggaatgccattcaaacaccctgtggtcaccgtttctgc
aagaactgcattgagaagtctattcgtgatgcaggacagaggtgcccagtggacaatgaa
aggctgtcagaagagcagttgttcccagataactttgccaagcgggagattctgtcgcta
atggttcgctgttcaaactctggctgcggcgacagaatggagctccgacatttagagaaa
catttggcgcagtgtgagtttgccacggtgccctgcccgcagtgccagcagtctgtgagg
cagagccagctcgaggagcacacgactgtggagtgcaagaggaggcctgtgtcatgccca
gattgtgtggcgtgctttgttcacgaggacagagagcttcatgagcagcagtgtcccttt
gccaatgtgaagtgccagtactgtgagatggatctcatcagagaccagattgaatctcat
tgtgatacagattgcccaaaagcacccatcgcctgtaactttagcacctttggatgtaag
gaaaggatgcagcgccacaacctggctcaacacatgcaggagttcactcagatgcacatg
cgctacatggctgagttcctgcgtggcttcagcctcaatggcaccacacccaaatctctg
tggacgctaggaccatctgtttcctccgatgatcagggagcaggagccgcagcagcagtc
tcagcctgcagtgggccccgaggagctgcaggctgcagcagcaactgcgccccgtctccg
cctacggaggaggtgcagaggctcagggagatggatggacgattggtgaggcaggatcat
cagctgcgggagctcatcatcttaaaagaaacacagtccggtcagcttgcagagctcagg
cgcagagtgtcgtcactggaggagacggtgaaggagctggagtcgcagcagtgtcacggt
atcttcatctggcgcctcagaggtttcgccgccctcctgcggaaccaagaagcaggcttg
cccgtggtggagcacagccccgccttctacaccggtcgcccaggctacaagctgtgcctg
cgcctacacttgcaggccccaaacgccccacgctgctccaactacatctccctcttcgtc
cacaccatgcaaggaacatttgacgggcagctgacgtggccattccagggaaccatccgc
ctcaccatcctagaccagggccctgagggtcagcaccacacagaggtgatggagactaaa
ccagacctgcaagccttccagaagcccaccattcagcgcaaccccaaaggattcggctac
gtcaccttcctgcacctgcaacagctgagtcagagagcctttgttaaggaggacacttta
ctcatccgctgtgaagtcacaccgcgttttgacaatgtgattcaccgcgagggccccacg
gtgcagcctagaggacctgaggctgcaatctcgagggactaa
DBGET
integrated database retrieval system
