Eleginops maclovinus (Patagonian blennie): 134864317
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Entry
134864317 CDS
T09869
Symbol
smcr8b
Name
(RefSeq) guanine nucleotide exchange protein smcr8b
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134864317 (smcr8b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emac04131
]
134864317 (smcr8b)
Membrane trafficking [BR:
emac04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
134864317 (smcr8b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
134864317
NCBI-ProteinID:
XP_063739260
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All DBs
Position
5:9172165..9185511
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AA seq
917 aa
AA seq
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MIGSPDLLAFTGTVGFGEGEEEEALSEQLSVPLLPPPNPWTSTSQFNRDFILVAEFSEQV
GPKPVLMIPDDPRFIGSFDLNHFSVRIMSVDYQASGPGHTPPASPGPRLNFSEDSKVILG
DSADDAFAYVQHMTLYDLEARGMVRPFCMAYVCSDQRKLMENFSELSTSFSQASDSLKTG
NRQAFSLELQRKLQELEYTRLALHQETDSPPRRVNGFTEEGEKADELEAVEHSILNHRDL
LRQVTSYPNRNLKCPDFLPYDPADSLNDTTAILPPEPGSSTTPSCRSERRLKPLQELCNS
YFLSLMKEQLADTERRLRGDRSVLRTTSTIQSLSRRLTLTNFLFELWRPEEGSEEERESA
EAELQRATGNKSGLGAFQSEPMSMESFCSCVEEIPIKMEAGDARIMTPDPSVGTEMTGSV
SSSDSIEVLGTEKSYQTQNGSDSRETSVGMKDSSYRRAAVDSGVRHGRVYTRRTNSEDSI
EVLSTTESIFPDDLTAITEEESEYQALSNGFEKEEEIPGECKSNNVLKEDNILNPTSSVT
KDENQAQVQEYDGRVDREETLKQNTVSGEVLMKEEKVIECLTSNHVHEDNGSEKTSKPLP
DEEMVELIPRWSGVHQKERSVPDLRVNFAPTVALAEVDRWSPPCAPLRLLSVDEASDCTS
INGSTDLPSKSQNVHSIPHSHQRRRRKAGLRALRFLKQNSFSQHALFCLLSGRPLVVIGG
DESLVRKLVDALSLFLPAPGPDGNAVKVCLNTPLQLTDLLTWRLIGMHRSSSITSASIIH
SLTRYSRYLALLDLDQRTLRCPSYSGSLISRLADPHSGISRGITYLLHLESCLTALASQA
LLCTFNPALQRPNKSGGNDASEEKDFMWTRGLCSSENDLKVIHFLCDLIKQRHAGRGPPV
FGFSYDSMHLHKNTFTA
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggtctccggacctgctggccttcaccggcaccgtggggtttggggagggagag
gaggaggaggctctatctgaacaactctctgtccccctgttacctccaccgaacccctgg
acctcaacctcccagttcaacagagacttcatactggtggctgaattctcagagcaggtg
ggacccaaacctgtgctgatgataccggacgaccccaggttcattggatcattcgacctc
aaccacttctctgtgcgcatcatgtctgtggactaccaggcgtcgggccccggccacacc
cctcctgcatcccccggcccccgtctcaacttcagcgaggactccaaagttattcttggg
gattcagcggatgatgcatttgcatatgtgcagcacatgaccctgtatgaccttgaagct
cggggtatggtgcgtcctttctgcatggcgtacgtttgctccgaccagaggaagctgatg
gagaacttctctgagctgtcgacaagcttctctcaggcctccgacagccttaagacggga
aacagacaggctttctctttggagctgcagagaaaattgcaagagcttgagtatacacgg
ttggctttgcatcaggagactgattctcctccaaggagggtaaatgggtttacagaggag
ggagagaaagcagatgagcttgaagctgtagagcattcaatccttaatcatagagacctc
ttgcgccaggtcacttcctacccaaacaggaatctgaaatgtcctgacttcctgccttac
gacccagccgactccctcaatgatacaacagcaatactgcctcctgagcccggttcctcc
accaccccctcctgcaggtccgaacgccgtctgaagcctctccaggagctttgcaactcc
tacttcctgtctctgatgaaggagcaacttgctgacacagagcgacgtctacgtggcgat
aggagtgtgctgcggacgactagtaccatacagtcgttgtcccggaggctcacgctcacc
aacttcctgtttgagctttggaggccagaggagggatctgaggaagagcgagagagcgct
gaggccgagctgcagagggcgacggggaataagagcggccttggggcgtttcaatcagaa
ccaatgagcatggagtcgttctgctcctgcgtggaggagatccccatcaaaatggaggca
ggagatgccaggataatgacccctgaccccagcgttggcacggagatgacggggagtgtg
agcagcagcgacagcattgaagtgctcgggactgagaagtcttatcagacccagaatgga
tctgacagcagagaaacctcagtcgggatgaaggactcctcttacaggcgagctgcagta
gattcaggtgtcaggcacggcagagtgtacaccagacgaacaaacagcgaggacagcatc
gaggttctgagcaccacagagtccatctttcctgacgacctcaccgccatcacagaggaa
gagtcagagtaccaagctcttagtaatggctttgagaaagaggaggaaataccgggagaa
tgtaaatccaacaatgtcctcaaggaggataacatattgaatccaacctcttcagttacc
aaggatgaaaaccaagcgcaggttcaggaatatgacggtcgtgttgacagagaagagacc
ttaaagcaaaacaccgttagtggtgaggttttaatgaaagaggagaaggtcattgaatgt
ttgacgagcaatcatgtgcatgaagacaacggttctgagaagacgtccaaaccactgcca
gatgaagaaatggtggagttgatacctcgctggtctggagtccatcagaaggagcggtcg
gtgcctgaccttcgtgttaactttgccccgactgtagctctggcagaagtcgatcggtgg
tctccgccctgtgctcctctccggctgctgagcgtcgacgaggcgtccgactgcaccagc
atcaacggctccacagacctgccgtctaaaagtcaaaacgttcacagcatcccccactca
catcagaggagaaggaggaaggccggactgagagccctcaggttccttaaacagaactcc
ttctcccagcatgccttgttttgtctcctgagcggccggccgctggtcgtcatcggtggt
gacgagagtttggtcaggaaactggtggatgctctgagtctcttcctgccggctcctggt
cctgatgggaatgctgtgaaggtgtgtctgaacacaccgctgcaactgaccgacctgctc
acctggagactgataggaatgcacagatcatcctccatcacctcggccagcatcattcac
tctctgactcgctacagtcgttacttggcgctgttggacctggaccagaggacgctgcgc
tgtccgtcgtactccggctctctcatcagccgactggccgaccctcactccggcatcagc
cggggcatcacctacctgctgcacctggagagctgcctgactgcactggccagtcaggcg
ctgctgtgcacctttaatcctgcgttacagcgtccaaacaaatctggagggaatgatgcc
tcagaagaaaaggacttcatgtggacgcgaggattgtgcagcagtgagaatgatttgaaa
gtgatacacttcctgtgtgacctcattaaacagcgccatgcaggacgtggaccaccagtt
tttggattctcttacgactcaatgcacctgcataaaaatacatttacagcataa
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