Eleginops maclovinus (Patagonian blennie): 134868188
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Entry
134868188 CDS
T09869
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04010
MAPK signaling pathway
emac04137
Mitophagy - animal
emac04141
Protein processing in endoplasmic reticulum
emac04210
Apoptosis
emac04217
Necroptosis
emac04621
NOD-like receptor signaling pathway
emac04622
RIG-I-like receptor signaling pathway
emac04920
Adipocytokine signaling pathway
emac05132
Salmonella infection
emac05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134868188 (traf2b)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134868188 (traf2b)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
134868188 (traf2b)
09143 Cell growth and death
04210 Apoptosis
134868188 (traf2b)
04217 Necroptosis
134868188 (traf2b)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134868188 (traf2b)
04622 RIG-I-like receptor signaling pathway
134868188 (traf2b)
09152 Endocrine system
04920 Adipocytokine signaling pathway
134868188 (traf2b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134868188 (traf2b)
09171 Infectious disease: bacterial
05132 Salmonella infection
134868188 (traf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134868188 (traf2b)
04121 Ubiquitin system [BR:
emac04121
]
134868188 (traf2b)
Enzymes [BR:
emac01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134868188 (traf2b)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
134868188 (traf2b)
Ubiquitin system [BR:
emac04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
134868188 (traf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-RING_6
zf-C3HC4_2
Paramyxo_NS_C
zf-RING_2
Mcp40H-20_sensor
ATG16
Motif
Other DBs
NCBI-GeneID:
134868188
NCBI-ProteinID:
XP_063745197
LinkDB
All DBs
Position
8:complement(12265409..12279137)
Genome browser
AA seq
520 aa
AA seq
DB search
MAYISMDCPSSLPGIPQSVLSVPMENKYKCQQCHQVLRKPVQAQCGHRFCVHCFKQLTSS
GPKPCEACREEEIYEEPFSILNSNEAFPDNAAGREIASLPARCLNEGCDWTGSIKEYEAQ
HEGRCELERIKCEACSNTILRSEKDRHNERECEERTLNCKYCKISFNFKEIKAHDEICPK
FPLQCKDCGKKKIPREKFSDHSKSCAKSKSACPFSDVGCKHVIENGKQSDHEHSSTMEHL
RLLLPMVLSLAGPLADASGPGEWQEDSGLGLYRAPEEGVSMGSGAAASMQSVDLEKKVKA
LENIVCVLNREVERSSVTLEAFAHQHRLDQDKIENLSSKVRQLERTIDMRDLKLSETEQL
VRELQFCTYDGIFVWKISDFSRRRQDAVASRTPAMFSPAFYSSKYGYKMCLRLYLNGDGT
GRGTHLSLFFVVMRGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSTSFQRPIS
EMNIASGCPLFCPLARLAGKSPYLRDDTIFIKAIVDLTGL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcctacatctcgatggactgccccagctctttaccagggattcctcaaagtgtgctg
tcagtgcccatggagaataagtacaaatgtcagcagtgtcaccaggtcctgaggaagcct
gtccaagcacagtgcggacaccgcttctgtgtacactgcttcaagcagctcaccagttct
ggcccaaagccttgtgaagcctgccgcgaagaggagatatacgaagaacctttttcgatt
ctaaatagtaatgaggcatttccagacaatgctgcaggccgagaaatagcaagcctgcct
gccaggtgtctgaacgagggctgtgattggacaggctcaataaaagagtatgaggctcag
catgaaggccgttgtgaacttgagcggataaagtgcgaggcctgcagtaacacgatcctt
cgctcggagaaggacagacacaatgagagagaatgtgaagaaaggacgctcaactgcaaa
tactgcaaaatatccttcaactttaaagagatcaaggcccatgatgagatctgtccaaag
ttccccttacaatgcaaagactgtggcaagaagaagataccaagagaaaagttcagtgac
cacagcaaatcttgtgctaagtcaaagagtgcctgtcccttcagtgatgtgggctgtaaa
catgtgatagagaacgggaagcagagcgaccatgagcacagcagcaccatggagcacttg
cgtctgctgctgcccatggtgctgtccttggctgggccgctcgccgatgcttctggtccc
ggagagtggcaggaggactctggtctgggcctgtacagggcccctgaggagggggtcagt
atggggtctggagctgcagcctccatgcagtctgtggacctagaaaaaaaggtaaaagcg
ttggaaaacattgtgtgtgtcctgaaccgagaggtggagcgcagttcagttacgttggag
gctttcgcgcatcagcatcgattagaccaggacaaaatagaaaatctctccagtaaagtg
cgtcagctagaacggacaatcgacatgagggacttgaagctgtctgaaactgagcaactg
gtgcgtgaactccagttctgcacctacgacgggatctttgtgtggaaaatctccgacttc
tcacgccgcagacaggatgcggtggccagtcgaacacctgcaatgttctctccagcattt
tattccagcaaatacggctacaaaatgtgtctgaggctatatttgaatggcgatgggacg
ggtcgaggaactcacctttcgctgttctttgtcgtcatgaggggaaagtgcgacgctctg
ctcaaatggccattcagtcagaaggtgacgctgatgctcttggatcagaacaacagggag
cacatcatcgatgccttccgcccagatgtcacctccacctcttttcagcggccgatcagc
gagatgaacatcgccagcggctgcccgctcttctgtccgctcgccagactcgctggcaag
agcccatatctgagggatgataccatttttatcaaagccattgtagacctcacaggcttg
tag
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