Eleginops maclovinus (Patagonian blennie): 134868205
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Entry
134868205 CDS
T09869
Symbol
kdm2bb
Name
(RefSeq) lysine (K)-specific demethylase 2Bb isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
134868205 (kdm2bb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
emac03000
]
134868205 (kdm2bb)
04121 Ubiquitin system [BR:
emac04121
]
134868205 (kdm2bb)
03036 Chromosome and associated proteins [BR:
emac03036
]
134868205 (kdm2bb)
Enzymes [BR:
emac01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
134868205 (kdm2bb)
Transcription factors [BR:
emac03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
134868205 (kdm2bb)
Ubiquitin system [BR:
emac04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
134868205 (kdm2bb)
Chromosome and associated proteins [BR:
emac03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
134868205 (kdm2bb)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
134868205 (kdm2bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
JHD
F-box-like
DUF7885
F-box
JmjC
Cupin_8
LRR_4
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
134868205
NCBI-ProteinID:
XP_063745229
LinkDB
All DBs
Position
8:13683177..13708852
Genome browser
AA seq
1381 aa
AA seq
DB search
MAQAVETCAESGRRLRSICRRMYDENEDLSDVEEIANIRGFSVEEKLVSDSYSATFVHCM
EGKDFSYEYVQKDALRTPLIFKEKDGLGIRMPDPEFTVSEIKGLVGSRRSVDVMDVSTQK
GSEMSMAQFVRYYETPEEERDKLFNVISLEFSHTKLENLIKRPTVVDQVDWVDNMWPPDL
KQSQTEATNVISDMKYPKVQRYCLMSVKGCYTDFHIDFGGTSVWYHVFKGQKVFWLVPPT
PHNLALYEDWVLSGKQSDIFLGDRADGCQRVELKQGYTFFIPSGWIHAVYTPEDTLVFGG
NILHSFNIPMQLTIHEIENRTKVNSKFRFPFYNEMCWYVLERYLHCLTTRSYLSRDVRKE
PVLTDNETKANTESPSSDSRIQDLNEDSCETQVRDGQGEKPERGAQDGPSSPDNRRGQHL
KAVLSVDSEDSCNPGSTSLEFPQTPSDSPASESVNKWTHLTEFELSGLRKLVEKLESLPE
NKKCVPEGIENPQALLEDMKVLLKEHADDDLKLAITGVPVVSWPKKTIKPRPPNRPKPKM
ATSPASAVKLSASRGTSGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCI
MRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEEKFNLMLMECSICNEIVHPNCLKVKDSNG
VVNDELPNCWECPKCNHAGKTGKASKQKRGPGFKYASNLPGSLLKEPRLNRDSRDEPDSP
MVATATVTALTATSALKRKAEREEVPKRKEDEPLKKRPPLLSLDGTPRPRIEDNPLRKKR
KLFDTNDEPVIVKKKKKLSKPDDPLTPKRHIKTENDHDEEDDDQEDPEGDRFSLERIKLK
GKKEYDDEDQEEDEEGEEPVKKERDRSAEDKAKFLLSPLLRTSAIRESEQTSNSPRAGPS
SDSGDAQLKARHQRRRLPNKELSKEFKPETPKAADQNHGSVKTEDSSAIHNRRQLKKEDS
MTNQNRKPLKTEDLTTNQSRRALKTEEGLTNQNRRPLKTEDSLANQNHRPVKTEPENEVD
EQKPRWPLNNGGSDLGDWLRHRGREPNDTTRGYSPLGWNRGTQITPICPRPLPCRSPPKC
IQMERHVIRPPPISPPPDRLSLNDGETHVMRREMWMTVFSHLTHRDLCVCMRVCRTWNRW
CCDKRLWKHINLNRCKSITPLMLSGIIRRQPVALDLSWTNISKKQLSWLINRLPGLRVLL
LSGCSWVAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQLDNRSKLRNV
EDLRLAGLDITDTSLRLLIRYMPSLSKLDLSYCNHVTDQSVNILTAAGTTTRDSLTDINL
SVCNRVTDQSLTYFKRCGSVCHIDLRYCKQVTKEGCDQFIAEMSVSVQFELIEEKLLQKI
S
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atggcccaggccgtggaaacgtgtgctgaatccggacgcaggctgcgctccatctgccgg
aggatgtacgacgaaaacgaggatctatccgatgttgaagaaattgcaaacatcagaggt
ttcagtgtggaggaaaagcttgtcagtgacagttacagtgcgacatttgtgcactgcatg
gagggtaaagacttctcttatgaatatgtgcaaaaggacgctctcaggaccccactcatt
tttaaagagaaagatgggcttgggatcagaatgcctgatccagaatttacagtcagtgaa
attaaaggattagttggcagtcggcgctctgtggatgtgatggatgtgagcactcagaaa
ggctctgagatgagcatggctcagtttgtacgttattatgagacaccagaggaagagcgg
gacaaactcttcaacgtcatcagcttagagttcagtcatactaagctggagaacctcatc
aagcggcccacagtggttgatcaagtggactgggtggacaacatgtggcctcctgatctg
aaacaaagccaaacagaagcaaccaatgtaatctcagacatgaagtaccctaaagtgcaa
aggtattgtttgatgagtgtcaagggctgctacacagacttccacattgatttcggggga
acctctgtttggtatcatgtattcaaaggacaaaaagtcttttggctagtgcctccgacc
cctcataatcttgccctttatgaggactgggttctgtcaggcaagcagagcgatatcttc
ctgggagaccgagctgacggatgccagcgagtggagcttaagcaaggatacaccttcttc
atcccatctgggtggatccatgctgtctacactccagaggacacgctggtgtttggaggc
aatattctgcacagcttcaacattcctatgcagcttaccatccatgagatagagaatagg
actaaggttaattcgaagttccgtttccccttctacaatgagatgtgctggtatgtcctg
gagagatacctgcactgcctcacaacacgttcctatttatctcgggatgtccgcaaagag
cctgtactaacggataatgagacaaaggccaacacagaaagcccctcctctgactcaaga
atccaggacctgaacgaggactcatgtgagactcaggtcagggatggtcagggtgagaaa
ccagagagaggcgctcaggacggacccagctctcctgacaaccggaggggccagcacctc
aaagccgttttatctgtggactctgaggacagctgtaatcccggctccacctctctagag
ttcccccaaaccccctcagactccccagcctcggagtctgtgaataaatggacgcatttg
acagagtttgaactgagcggactcaggaaactggttgagaagctggagtcactccctgaa
aataagaaatgtgttccagagggaatagagaacccacaagccctgctggaagacatgaag
gttctcttaaaagaacatgccgatgacgacctaaaattagcgatcactggggttcctgtg
gtgtcctggcccaagaaaaccataaagccccggcctcccaaccggccgaaacctaagatg
gcaacttctcctgcatcagcagtcaagctgtcagcgagtcggggaacatctggcgccagg
aggaggcggacgcgctgccggaagtgtgaggcatgcctgcggacggagtgtggagagtgc
cacttctgtaaagacatgaagaagtttggtgggccgggccgcatgaaacagtcctgcatc
atgaggcagtgcatagcacctgtcctgccccacacggctgtgtgtctcgtctgtggagag
gcagggaaagaggacacagtggaggaagaggaggagaagtttaacctcatgctcatggag
tgctccatctgcaatgagattgttcatcctaactgtcttaaggtaaaagattcaaacgga
gtagtcaatgatgaattgccaaactgctgggagtgcccaaagtgcaaccatgcagggaaa
acagggaaagcctcaaagcaaaaaagggggccaggatttaagtacgcatccaaccttcct
ggctcgctcctgaaagagccgcgtttgaaccgggattcaagagacgagcctgactcgcca
atggtggctacagcaactgtgactgctctgactgccacatctgctcttaaaagaaaggca
gagcgggaggaagtccctaagaggaaagaggacgagccactgaagaaacgcccacccttg
ctgtctctggatggtacgccccggccaaggattgaggacaacccactgaggaaaaagagg
aaactttttgatacaaatgatgaacctgtgattgtaaaaaagaagaagaaactttcaaaa
ccagatgaccctctgactccgaagcggcacatcaagaccgagaacgatcatgacgaggaa
gatgatgaccaggaggatcccgaaggagatcgattttctttggaaaggattaagttaaag
gggaaaaaagagtatgatgacgaggaccaagaagaagatgaggagggagaggagccggtg
aaaaaagaaagagaccgcagtgcagaggacaaagccaaattcctgttaagtcccctgcta
agaacatctgcgatcagagaaagtgaacaaacctcaaactctcccagagcgggaccaagc
agcgactcaggagacgctcagctgaaagctcgccatcagcgacgacggctccccaacaag
gagctgagcaaagagtttaaaccggagactcccaaggcagcagaccagaaccacggctcg
gtgaagacagaggacagctcagccattcacaacagacgacaactcaagaaagaggactca
atgaccaatcagaatcgcaaacccttaaaaacagaggacttaaccactaatcagagccgc
agggcccttaaaactgaggagggtttgaccaatcaaaacagacggccactgaaaaccgag
gacagtctggccaatcaaaaccacaggcctgtaaaaaccgagcctgagaacgaggtggat
gagcaaaagccgagatggcctcttaataatggcggcagtgatctgggcgactggctgcga
cacagggggcgagagccgaatgatacgacgcgaggttactcgccgctcggctggaacagg
ggcacccagatcactccgatatgcccccgcccactcccctgcaggtccccgccgaaatgc
atccaaatggagcgccatgtgatccgtcctcctcccattagccccccgccggacagactc
tcgctgaacgacggagaaacacacgtgatgcgcagagagatgtggatgacagttttcagt
catttgactcacagagatctttgcgtgtgcatgcgtgtctgcaggacgtggaacagatgg
tgctgtgacaagaggctctggaagcacatcaatctgaacaggtgtaagtccatcactcct
ctcatgctgagcgggatcatccgcaggcagccggtggctctggacctgagctggaccaac
atctccaaaaaacaacttagttggctcatcaacagactgccaggtctgcgggtgctgctg
ctgtcaggttgctcctgggtggcggtctctgctctctgcacctcaagctgtcctctcctg
cggactctggatgttcagtgggtcgaaggactgaaagacgcccagatgagggacctgctg
tctcctcctacagataacaggccaggtcagttggacaacaggagcaagctgcgtaacgtc
gaggacctgcggctggccggcctggacatcacggacacctctctgcgcctcctcatacgc
tacatgccctcgctgtccaagctggacctgagctactgcaaccatgtcacggaccagtca
gtcaacatcctgactgcggcaggaacaaccacaagagactcgctcactgacatcaacctg
tcagtctgtaacagagtcactgaccagtcactgacctacttcaagcgctgtgggagcgtc
tgtcacatcgacctgcgatactgcaaacaggtgaccaaggaaggctgtgaccagttcatc
gcagaaatgtccgtcagtgtgcagtttgaactgatagaagagaaactgctgcaaaagatc
agctag
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integrated database retrieval system
