Eleginops maclovinus (Patagonian blennie): 134870924
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Entry
134870924 CDS
T09869
Symbol
irf3
Name
(RefSeq) interferon regulatory factor 3 isoform X1
KO
K05411
interferon regulatory factor 3
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04620
Toll-like receptor signaling pathway
emac04621
NOD-like receptor signaling pathway
emac04622
RIG-I-like receptor signaling pathway
emac04623
Cytosolic DNA-sensing pathway
emac05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
134870924 (irf3)
04621 NOD-like receptor signaling pathway
134870924 (irf3)
04622 RIG-I-like receptor signaling pathway
134870924 (irf3)
04623 Cytosolic DNA-sensing pathway
134870924 (irf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134870924 (irf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
emac03000
]
134870924 (irf3)
04131 Membrane trafficking [BR:
emac04131
]
134870924 (irf3)
Transcription factors [BR:
emac03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
134870924 (irf3)
Membrane trafficking [BR:
emac04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
134870924 (irf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
134870924
NCBI-ProteinID:
XP_063749523
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All DBs
Position
10:6915999..6921423
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AA seq
461 aa
AA seq
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MSRPLLMPWLRTKINSGGFPGVQWTNTEHTEFSVPWKHALRQDSSDTDILIFKAWAEVSG
NGQAHGEPSVWKRNFRSALRAKGFVLISDNKNDAANPHKVFRWPKESASGANSAAGSQDQ
DDPDFFEEFPLPTQESQVIQNLEGCLFLPEDTVFSAESSSHHDILQECLEGLNIGPNTEG
TAGFELPPEQQQIQNPAVIGCYALPGQQQYPVMYEGEAGLPEQPAGPIEGAVGGACDGQF
AEQFLHSMNNTRDGDHFKTHFRISVYYRGVKVSEQLVTNEVGIRLIYRPELTGTVLDPDS
GLSLVSLPSPEAMLDQTQAILTQRILDKLGEGLDIGVSGSVVYGQRRGEIKTFWSFSKFD
ESRQPQEISKLQPQSLYMFKEFLQGILNFIQGRESPPSSLFFCLGEKWPDKDNRPWDKKL
ITVEVVLTSMECLKNIAVEGGASSLRSDDLQMSLEEMMDMY
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaccactgctgatgccctggctgcggaccaagattaacagtggtggatttcct
ggtgtccagtggaccaacacagagcatactgagttctctgtcccatggaaacacgccttg
agacaggactcctccgacacggacatcctcatctttaaggcctgggcagaggtgagcggc
aatggccaagctcacggagaaccttcagtctggaagaggaacttccgcagcgccctccga
gccaaaggcttcgtattgatctctgacaacaaaaacgacgccgctaacccccacaaagtg
tttcgctggccaaaggagtcagcttcaggagctaactctgctgctggatcccaggaccaa
gatgatcccgatttctttgaagaatttccccttcctacacaagagagtcaggtcatccaa
aacctcgaaggctgtctctttcttccagaagacacagtgttttcagcagaatcctccagc
catcatgatattctgcaggagtgtctagagggactgaacattggccctaacacagagggc
actgcaggctttgagcttcctcctgagcaacagcagatccagaacccggctgtgattggt
tgttacgcgttgcctgggcaacagcagtatccagtgatgtatgagggtgaagctgggttg
cctgagcaaccggcaggaccaatagagggagccgtgggcggggcttgtgacgggcagttt
gcagagcagttcctacattccatgaacaacaccagagatggagatcatttcaagactcat
ttcaggatatccgtgtactacagaggggtgaaggtgtctgagcagctggttacgaatgaa
gttggaatccgcttaatctacaggcccgaactcacagggacagttttggatcccgattca
ggcctgtcgctggtctctctgccaagtcctgaagccatgctggatcaaacccaggccatt
ctgactcaacgcatcctggacaagctgggcgaaggtttggacatcggagtgtcggggagt
gtggtctacggccagcgacggggtgaaatcaaaacattttggagcttctccaaatttgac
gagagcagacagccgcaagagatttctaaactgcagcctcaatcactgtacatgttcaag
gaatttctgcaaggtatattgaacttcattcaagggagggaatcccctcccagctccttg
ttcttctgcctcggagagaagtggcctgataaagacaacaggccttgggataagaaactc
atcacagtggaggtggtcctgacttcgatggagtgtctgaaaaatatagcggttgaaggc
ggcgcctcctcgctgcggtctgatgatctgcagatgtctctggaagagatgatggacatg
tactga
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