Eleginops maclovinus (Patagonian blennie): 134873839
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Entry
134873839 CDS
T09869
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04010
MAPK signaling pathway
emac04137
Mitophagy - animal
emac04141
Protein processing in endoplasmic reticulum
emac04210
Apoptosis
emac04217
Necroptosis
emac04621
NOD-like receptor signaling pathway
emac04622
RIG-I-like receptor signaling pathway
emac04920
Adipocytokine signaling pathway
emac05132
Salmonella infection
emac05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134873839
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134873839
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
134873839
09143 Cell growth and death
04210 Apoptosis
134873839
04217 Necroptosis
134873839
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134873839
04622 RIG-I-like receptor signaling pathway
134873839
09152 Endocrine system
04920 Adipocytokine signaling pathway
134873839
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134873839
09171 Infectious disease: bacterial
05132 Salmonella infection
134873839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134873839
04121 Ubiquitin system [BR:
emac04121
]
134873839
Enzymes [BR:
emac01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134873839
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
134873839
Ubiquitin system [BR:
emac04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
134873839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-RING_4
zf-C3HC4_2
Sina_ZnF
zf-RING_5
zf-RING_6
zf-C3HC4_4
MATH
zf_C2HC_14
Motif
Other DBs
NCBI-GeneID:
134873839
NCBI-ProteinID:
XP_063753790
LinkDB
All DBs
Position
12:3526333..3543851
Genome browser
AA seq
570 aa
AA seq
DB search
MAAQEPSPPSTLEGNKPGFPKKILVNNLDDEHLCNSCQKILRRPLQAQCGHRFCSFCFNK
IVSSGPQKCSACIKEELFEEPTSILKQGGAFPDNASRREVEALSAVCPNEGCTWTGTIKE
FEACHEGNCDFMIILCPSCKELMRANEQERHNERECPEKTLNCKYCKEPFLLKNIKAHDE
ICPKYPMICEGCAKKKIPRGKYVDHIKFCTKFKAPCRFHVVGCDTSVEKEKAHDHERQCS
YEHLNMLLHFIMGIKVSLESLQPQSLEAASHKLQELHQSLRELELKMSQLVGGGGAAVPV
QGACATTVATSFTPLPSGVAAALELQLQSEKAKVVELSRRSLKLELKVSTFENIVCVLNR
EMERSCTIMEAYNRQHRLDQDKIEILNNKVRQLERTVSLWDLSIVEMEGKMREMSAATYD
SIFVWKISDFTKKRQDAVAGRAPAMFSPAFYTSKYGYKMRLRIYLNGDGTGRGTHLSLFF
VVMRGNSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSGMNIASGCPL
FCPLSKLDSKNSYIRDDTMFIKAIVDLTGL
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacaggagccgtctccaccatccaccctggaaggcaacaaaccgggcttccca
aagaaaatcctagttaacaacctggacgacgagcatttgtgcaattcgtgccagaaaatc
ctgaggaggcccctgcaagctcaatgtggccaccgcttttgttcgttctgcttcaacaaa
attgtgagttcgggacctcaaaaatgcagcgcttgcatcaaagaagaattgtttgaggaa
cccacctccattctcaagcaaggcggtgcctttcctgacaacgcatcacggagagaggtt
gaggccttgtcagctgtctgtcccaacgaaggatgcacgtggacgggaactatcaaagag
tttgaggcctgccatgagggaaactgtgacttcatgatcatcctttgtccctcctgcaaa
gagctgatgagagccaacgagcaggagcgccacaacgagagagaatgtcctgagaagacg
ctcaactgcaaatactgcaaagagcccttcctgttaaagaacataaaggctcatgatgag
atctgtccaaagtacccgatgatctgtgagggttgtgcaaagaaaaagatccccagagga
aagtatgtggaccatattaagttctgcactaaatttaaagcaccatgcagatttcatgtt
gttggctgcgatacgtctgtggagaaagagaaggcccatgaccacgagaggcagtgctcg
tacgaacacctaaacatgctcttgcatttcatcatgggcatcaaggtcagcctggagagc
ctgcagccccagagcctggaagcagctagccacaagctgcaggagctgcaccagtccctc
cgggagctggagctcaagatgagccagctggtggggggagggggcgctgcggtccccgtg
cagggtgcatgtgccacgaccgtggccacctccttcaccccgctgcccagtggcgtggcg
gctgcgctggagctacagctgcagagcgagaaggccaaggtggtggagctgagccgccgc
tccttgaagctggagctcaaagtcagcacgttcgagaacatcgtgtgcgtcctcaaccga
gagatggagcgctcctgcaccatcatggaggcctacaaccgccaacacagactggaccag
gacaagatcgagatcctcaacaacaaggtgcgtcagctggagaggacggtgagtctgtgg
gacctatccatcgtggagatggaggggaaaatgagagagatgtctgcagccacatacgac
agcatctttgtgtggaagatctccgacttcaccaagaagaggcaggacgccgtggccggc
cgcgccccagccatgttctcccccgctttttataccagtaaatacggctacaagatgcgc
ctgcggatctacctgaacggcgacgggacggggcggggaacacatctttcgctcttcttc
gtggtgatgagaggaaacagcgatgcactcctcaagtggcctttcaaccagaaggtcacc
ctcatgctgctggaccagaacaacagggagcacatcattgatgccttccggccagacatc
tcctcctcgtccttccagaggcccgtcagcggtatgaacatcgcaagcggctgcccgctc
ttctgcccgctctctaaactggactccaagaactcctacatacgcgacgacaccatgttc
atcaaggccatcgtcgacctcactgggctctag
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