Eleginops maclovinus (Patagonian blennie): 134876790
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Entry
134876790 CDS
T09869
Symbol
thbs1b
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04115
p53 signaling pathway
emac04145
Phagosome
emac04148
Efferocytosis
emac04350
TGF-beta signaling pathway
emac04510
Focal adhesion
emac04512
ECM-receptor interaction
emac04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134876790 (thbs1b)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134876790 (thbs1b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134876790 (thbs1b)
04148 Efferocytosis
134876790 (thbs1b)
09143 Cell growth and death
04115 p53 signaling pathway
134876790 (thbs1b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
134876790 (thbs1b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134876790 (thbs1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emac04131
]
134876790 (thbs1b)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
emac00536
]
134876790 (thbs1b)
Membrane trafficking [BR:
emac04131
]
Endocytosis
Phagocytosis
Opsonins
134876790 (thbs1b)
Glycosaminoglycan binding proteins [BR:
emac00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134876790 (thbs1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
Laminin_G_3
TSP1_ADAMTS
cEGF
EGF
TSP1_CCN
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
134876790
NCBI-ProteinID:
XP_063757999
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All DBs
Position
15:4741950..4754173
Genome browser
AA seq
1168 aa
AA seq
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MKLTGIFLLLMCWTCEGARVAESRDDNSVYDLFELVKVPKKNHGVTQVKGDDPYSPAYKI
LNPDLIPPVPESAFRDLIDSIHAERGFLLLLNFKQFKRTRGSLLTVEKRDGSGPVFEIVS
NGKANTLDIVFSTENKQQVVSIEDADLATGQWKNITLFVQEDRAQLYAGCEEVNTAELDA
PIQSILTLETPASSQLRIGKGAVKDRFMGVLQNVRFVFGASLEAILRNKGCQSSTTDTLT
LENLNGSSAIRTEYTGHKTKDLQMVCGFSCEDLIGMFKELKGLGVVVKELSNELRQLTDE
NKLIKNRIGIHSGVCIHNGIVHKNKDEWTVDDCTECTCQNSATVCRKISCPLISCANATI
PDGECCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQTRD
CYLQECDKRFKQDGNWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQLGGKNCEGEGRQTE
KCQKSPCPINGNWGPWAPWDTCTLTCGGGIQNRKRLCNDPEPKYGGKECVGIAKDTEMCN
KKACPVDGCLSNPCFAGAKCTSLPDGSWKCGKCPAGYTGNGIKCKDVDECKEVPDTCFEF
NGVHRCENTEPGYNCLPCPTRYSGPQPFGKGVEQAAAKKQVCTPRNPCLDGSHDCNKNAR
CNYLGHFADPMFRCECKPGYAGNGHICGEDTDLDGWPNADLVCVENATYHCKKDNCPNLP
NSGQEDYDKDGIGDACDNDDDNDGIPDDRDNCPFVYNPRQYDYDRDDVGDRCDNCPYNSN
PDQTDTDNNGEGDACAVDIDGDGIINEKDNCPHVYNVDQKDTDLDGVGDMCDNCPLEHNP
DQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDDNDG
IPDDKDNCRLAFNPDQRDSDSDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFRKFQM
VPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYHEFNSVDFSGTFFINTERDDDY
AGFVFGYQSSSRFYVVMWKQITQTYWSNKPTKAQGYSGLSIKVVNSTTGPGEHLRNALWH
TGNTPGQVRTLWHDPKNVGWKDFTAYRWHLIHRPRTGLIRVVMYEGKKIMADTGNIYDKT
YAGGRLGLFVFSQEMVYFSDLKYECRDA
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgactgggatatttttgcttttgatgtgttggacctgcgagggtgcgcgagtc
gcagagagtcgagacgacaatagcgtgtatgacttgtttgagctggtcaaagtcccgaag
aagaaccatggggtgacccaggtgaaaggagacgatccgtacagccccgcttacaagatc
ctcaacccggacctgatccccccggtccccgagagcgcctttagggacctgatcgactcc
atccacgccgagagggggttcctcctcctgctcaacttcaagcagttcaagcggaccagg
ggtagcctcctgaccgtggagaagcgtgacggatccggacccgtgtttgagatcgtctcc
aatggaaaggcgaacaccctggacatagttttctccaccgagaacaagcagcaggtggtt
tccattgaagatgcggatctggctacggggcagtggaagaatatcacgctgttcgtgcag
gaggaccgcgcgcagctgtacgcgggatgcgaggaggtgaacaccgcggagctggatgca
cccatccagagcatcctgaccctggagaccccagccagctcccagctcagaatcggcaag
ggagccgtgaaggacaggttcatgggggtcctacaaaacgtccggtttgtgtttggagcg
tcactggaagcgatcctgcgcaacaaaggatgtcaaagctccacgactgacaccctgacc
ctggagaacctcaatggatcctcagccatcagaaccgagtacactggacacaagactaaa
gacctgcagatggtctgtggcttctcctgcgaagacctgatcggcatgtttaaggagctg
aagggcctcggtgtggtggtgaaggagctgtccaatgaactccgccagctgacggatgag
aacaagctgattaagaaccgcattggcatccacagcggagtctgcatccacaacggcatc
gtgcacaagaacaaagacgagtggaccgtggacgactgcaccgagtgcacttgtcagaac
tctgctaccgtgtgccgcaagatctcctgccctctgatctcctgtgctaatgctactatt
cctgatggggagtgctgccctcgctgtggaacaccgagcgactatgcagaggacggctgg
tcgccgtggtctgaatggacccattgttccgtgtcatgtgggcggggtatccagcagcgt
gggcgctcttgcgaccgtatcaataacaactgcgagggcacctctgtgcagactcgcgac
tgctacctccaggagtgtgacaagcgattcaagcaggacggtaattggagccattggtca
ccctggtcctcctgctccgtcacctgtggtgctggtgtcatcacccgtatccgcctttgc
aactcccccacccctcagctcggaggcaagaactgtgagggagaaggacggcaaactgag
aagtgtcagaaatctccttgcccaatcaatggtaactggggaccctgggctccatgggac
acctgtactctcacctgtggaggcggtatacagaatcggaaacgcctgtgcaacgacccc
gaaccaaaatacggtggcaaagagtgcgtcggtattgccaaagacaccgagatgtgcaac
aagaaagcctgcccagttgatgggtgcctgtccaacccctgctttgctggagccaagtgc
accagtctccctgatgggtcctggaagtgcggaaagtgcccagctggctacactggcaat
ggtatcaagtgcaaagatgttgatgagtgcaaggaggtcccagacacttgctttgagttt
aatggcgtgcaccgctgtgagaacaccgaacctggctacaactgtctgccatgtcctact
cgctactcaggaccccagccgtttggcaaaggtgttgagcaggctgctgccaagaaacag
gtgtgcacgccccgcaatccctgcctcgatggaagccacgactgcaacaaaaacgcccgt
tgtaactaccttggacattttgccgatcccatgttccgctgtgagtgcaagcccggctat
gctggcaacggccatatctgcggagaggacaccgatctggatggatggcccaacgctgac
ttggtgtgtgtggagaacgcgacctaccactgcaaaaaggacaactgtccaaacctccca
aactctgggcaagaagactacgataaggatggcattggagatgcctgtgacaatgatgat
gacaatgatggcattcctgacgacagggacaactgcccatttgtatacaaccccaggcag
tatgactatgaccgcgatgacgttggtgaccgctgcgacaactgcccttacaacagtaac
ccagaccaaacggacacagacaacaatggagagggagacgcctgcgctgtggacattgat
ggagatggcataataaatgagaaggacaactgtccccatgtgtacaatgtcgaccagaaa
gacacagatctggacggagtgggagacatgtgtgataactgccctctggaacataatcca
gatcaggtggattcagatgatgaccgagtgggagacaagtgtgacagcaaccaggacatc
gatgaagacggacaccagaacaacctggacaactgcccatacatccccaacgccaaccag
gctgaccatgacaaggatggcaagggagacgcctgtgatcatgatgacgacaacgatggc
atccccgatgacaaggacaactgcagactggccttcaaccctgaccaacgggactctgac
agtgatggtcgtggagatgcttgcaaagacgactttgaccaagacaacgtgcctgacatc
tacgacgtgtgcccagagaacttcgacatcagtgagacagacttccgcaaattccagatg
gttcctcttgaccctaaaggcacttcccagattgatcccaactgggtcgtccgccatcaa
ggcaaagagctggttcagaccgtcaactgcgaccctggcatcgctgtcggttatcatgag
ttcaattcagtggacttcagcgggactttcttcatcaacaccgagagggatgatgattat
gccggcttcgtgtttggctaccagtccagttccaggttctatgtggtgatgtggaagcag
attacacagacatactggtcgaataaacccaccaaggcccagggctactctggcttgtcc
attaaagtggtcaactccaccaccggaccaggagagcacctcaggaacgccctctggcac
acaggaaatacaccaggacaggtccgcactctctggcacgaccctaagaatgtcggatgg
aaagacttcaccgcctacagatggcatctgatccacaggccgagaacaggacttattaga
gttgtgatgtacgagggcaagaagatcatggcagatactggtaacatctatgacaagaca
tatgctggcggcagactaggtctttttgtgttctcacaagagatggtatacttctcagac
ctcaagtatgaatgcagagatgcctaa
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